BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00000036
         (371 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15634.3| unnamed protein product [Vitis vinifera]              129   3e-28
ref|XP_002283518.1| PREDICTED: nucleolar protein 56-like [Vitis ...   129   3e-28
ref|NP_176007.1| homolog of nucleolar protein NOP56 [Arabidopsis...   128   6e-28
dbj|BAH20197.1| AT1G56110 [Arabidopsis thaliana]                      128   6e-28
ref|XP_002322238.1| predicted protein [Populus trichocarpa] gi|2...   127   7e-28

>emb|CBI15634.3| unnamed protein product [Vitis vinifera]
          Length = 470

 Score =  129 bits (324), Expect = 3e-28
 Identities = 62/80 (77%), Positives = 71/80 (88%)
 Frame = -2

Query: 241 ALYLIFESSSGYAIFTVHGIDEIGQNTDAVRKSIDDLTRFGKVVKLEAFQPFSSALDALN 62
           ALYL++ES+SGYA+F  HG+DEIGQNT+AVR S+ DL RFGKVVKL AF PF SALDALN
Sbjct: 2   ALYLLYESASGYALFLAHGLDEIGQNTEAVRSSVSDLNRFGKVVKLAAFHPFESALDALN 61

Query: 61  QINAVSEGLMTDELRNFLEL 2
           Q N+VSEGLMTDELR+FLEL
Sbjct: 62  QCNSVSEGLMTDELRSFLEL 81


>ref|XP_002283518.1| PREDICTED: nucleolar protein 56-like [Vitis vinifera]
          Length = 558

 Score =  129 bits (324), Expect = 3e-28
 Identities = 62/80 (77%), Positives = 71/80 (88%)
 Frame = -2

Query: 241 ALYLIFESSSGYAIFTVHGIDEIGQNTDAVRKSIDDLTRFGKVVKLEAFQPFSSALDALN 62
           ALYL++ES+SGYA+F  HG+DEIGQNT+AVR S+ DL RFGKVVKL AF PF SALDALN
Sbjct: 2   ALYLLYESASGYALFLAHGLDEIGQNTEAVRSSVSDLNRFGKVVKLAAFHPFESALDALN 61

Query: 61  QINAVSEGLMTDELRNFLEL 2
           Q N+VSEGLMTDELR+FLEL
Sbjct: 62  QCNSVSEGLMTDELRSFLEL 81


>ref|NP_176007.1| homolog of nucleolar protein NOP56 [Arabidopsis thaliana]
           gi|6056371|gb|AAF02835.1|AC009894_6 nucleolar protein
           [Arabidopsis thaliana]
           gi|11878189|gb|AAG40838.1|AF302492_1 NOP56-like protein
           [Arabidopsis thaliana] gi|14517412|gb|AAK62596.1|
           At1g56110/T6H22_9 [Arabidopsis thaliana]
           gi|20857405|gb|AAM26718.1| At1g56110/T6H22_9
           [Arabidopsis thaliana] gi|21592692|gb|AAM64641.1| SAR
           DNA binding protein, putative [Arabidopsis thaliana]
           gi|332195224|gb|AEE33345.1| homolog of nucleolar protein
           NOP56 [Arabidopsis thaliana]
          Length = 522

 Score =  128 bits (321), Expect = 6e-28
 Identities = 60/80 (75%), Positives = 73/80 (91%)
 Frame = -2

Query: 241 ALYLIFESSSGYAIFTVHGIDEIGQNTDAVRKSIDDLTRFGKVVKLEAFQPFSSALDALN 62
           A+Y+I+ESSSGY +F VHG+DEIGQNT+AVR S+ DL+RFG+VV+L AF PF SALDALN
Sbjct: 2   AMYVIYESSSGYGLFEVHGLDEIGQNTEAVRTSVSDLSRFGRVVQLTAFHPFESALDALN 61

Query: 61  QINAVSEGLMTDELRNFLEL 2
           Q+NAVSEG+MTDELR+FLEL
Sbjct: 62  QVNAVSEGVMTDELRSFLEL 81


>dbj|BAH20197.1| AT1G56110 [Arabidopsis thaliana]
          Length = 432

 Score =  128 bits (321), Expect = 6e-28
 Identities = 60/80 (75%), Positives = 73/80 (91%)
 Frame = -2

Query: 241 ALYLIFESSSGYAIFTVHGIDEIGQNTDAVRKSIDDLTRFGKVVKLEAFQPFSSALDALN 62
           A+Y+I+ESSSGY +F VHG+DEIGQNT+AVR S+ DL+RFG+VV+L AF PF SALDALN
Sbjct: 2   AMYVIYESSSGYGLFEVHGLDEIGQNTEAVRTSVSDLSRFGRVVQLTAFHPFESALDALN 61

Query: 61  QINAVSEGLMTDELRNFLEL 2
           Q+NAVSEG+MTDELR+FLEL
Sbjct: 62  QVNAVSEGVMTDELRSFLEL 81


>ref|XP_002322238.1| predicted protein [Populus trichocarpa] gi|222869234|gb|EEF06365.1|
           predicted protein [Populus trichocarpa]
          Length = 500

 Score =  127 bits (320), Expect = 7e-28
 Identities = 61/80 (76%), Positives = 72/80 (90%)
 Frame = -2

Query: 241 ALYLIFESSSGYAIFTVHGIDEIGQNTDAVRKSIDDLTRFGKVVKLEAFQPFSSALDALN 62
           ALYL++E+SSGY++F  +GIDEIGQNT+AVR S+ DL RFGKVV+L AF PF SALDALN
Sbjct: 2   ALYLLYETSSGYSLFQANGIDEIGQNTEAVRNSVSDLNRFGKVVQLTAFHPFESALDALN 61

Query: 61  QINAVSEGLMTDELRNFLEL 2
           QIN+VSEG+MTDELRNFLEL
Sbjct: 62  QINSVSEGIMTDELRNFLEL 81