BLASTX nr result

ID: Coptis25_contig00000030 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00000030
         (507 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAC65326.1| chitinase III [Vitis vinifera]                        176   2e-42
sp|P51614.1|CHIT3_VITVI RecName: Full=Acidic endochitinase; Flag...   174   5e-42
gb|ACH54087.1| class III chitinase [Vitis vinifera]                   174   9e-42
ref|XP_003634089.1| PREDICTED: acidic endochitinase [Vitis vinif...   172   2e-41
emb|CAN61462.1| hypothetical protein VITISV_038584 [Vitis vinifera]   171   7e-41

>dbj|BAC65326.1| chitinase III [Vitis vinifera]
          Length = 297

 Score =  176 bits (445), Expect = 2e-42
 Identities = 81/100 (81%), Positives = 93/100 (93%)
 Frame = +3

Query: 3   LFDYVWVQFYNNPQCQYSSGNTGNLINSWNRWTSTIPATKIFMGLPAATGAAGSGFIPAN 182
           LFDYVWVQFYNNPQCQYSSGNT NL+NSWNRWTS+I + +IFMGLPA++ AAGSGFIPAN
Sbjct: 199 LFDYVWVQFYNNPQCQYSSGNTNNLLNSWNRWTSSINS-QIFMGLPASSAAAGSGFIPAN 257

Query: 183 VLTSQVLPAIRTSAKYGGVMLWNKYFDDQSGYSSNIRSSV 302
           VLTSQ+LP I+ S KYGGVMLW+KY+DDQSGYSS+I+SSV
Sbjct: 258 VLTSQILPVIKRSPKYGGVMLWSKYYDDQSGYSSSIKSSV 297


>sp|P51614.1|CHIT3_VITVI RecName: Full=Acidic endochitinase; Flags: Precursor
           gi|1150686|emb|CAA92207.1| acidic chitinase [Vitis
           vinifera]
          Length = 301

 Score =  174 bits (442), Expect = 5e-42
 Identities = 79/100 (79%), Positives = 90/100 (90%)
 Frame = +3

Query: 3   LFDYVWVQFYNNPQCQYSSGNTGNLINSWNRWTSTIPATKIFMGLPAATGAAGSGFIPAN 182
           LFDYVWVQFYNNP CQYSSGNT NL+NSWNRWTS+I +T  FMGLPA++ AAG GFIPAN
Sbjct: 202 LFDYVWVQFYNNPPCQYSSGNTNNLLNSWNRWTSSINSTGSFMGLPASSAAAGRGFIPAN 261

Query: 183 VLTSQVLPAIRTSAKYGGVMLWNKYFDDQSGYSSNIRSSV 302
           VLTSQ+LP I+ S KYGGVMLW+KY+DDQSGYSS+I+SSV
Sbjct: 262 VLTSQILPVIKRSPKYGGVMLWSKYYDDQSGYSSSIKSSV 301


>gb|ACH54087.1| class III chitinase [Vitis vinifera]
          Length = 297

 Score =  174 bits (440), Expect = 9e-42
 Identities = 80/100 (80%), Positives = 92/100 (92%)
 Frame = +3

Query: 3   LFDYVWVQFYNNPQCQYSSGNTGNLINSWNRWTSTIPATKIFMGLPAATGAAGSGFIPAN 182
           LFDYVWVQFYNNP CQYSSGNT NL+NSWNRWTS+I + +IFMGLPA++ AAGSGFIPAN
Sbjct: 199 LFDYVWVQFYNNPPCQYSSGNTNNLLNSWNRWTSSINS-RIFMGLPASSAAAGSGFIPAN 257

Query: 183 VLTSQVLPAIRTSAKYGGVMLWNKYFDDQSGYSSNIRSSV 302
           VLTSQ+LP I+ S KYGGVMLW+KY+DDQSGYSS+I+SSV
Sbjct: 258 VLTSQILPVIKRSPKYGGVMLWSKYYDDQSGYSSSIKSSV 297


>ref|XP_003634089.1| PREDICTED: acidic endochitinase [Vitis vinifera]
          Length = 297

 Score =  172 bits (437), Expect = 2e-41
 Identities = 80/100 (80%), Positives = 92/100 (92%)
 Frame = +3

Query: 3   LFDYVWVQFYNNPQCQYSSGNTGNLINSWNRWTSTIPATKIFMGLPAATGAAGSGFIPAN 182
           LFDYVWVQFYNN  CQYSSGNT NL+NSWNRWTS+I + +IFMGLPA++ AAGSGFIPAN
Sbjct: 199 LFDYVWVQFYNNAPCQYSSGNTNNLLNSWNRWTSSINS-RIFMGLPASSAAAGSGFIPAN 257

Query: 183 VLTSQVLPAIRTSAKYGGVMLWNKYFDDQSGYSSNIRSSV 302
           VLTSQ+LP I+ SAKYGGVMLW+KY+DDQSGYSS+I+SSV
Sbjct: 258 VLTSQILPVIKRSAKYGGVMLWSKYYDDQSGYSSSIKSSV 297


>emb|CAN61462.1| hypothetical protein VITISV_038584 [Vitis vinifera]
          Length = 297

 Score =  171 bits (432), Expect = 7e-41
 Identities = 79/100 (79%), Positives = 91/100 (91%)
 Frame = +3

Query: 3   LFDYVWVQFYNNPQCQYSSGNTGNLINSWNRWTSTIPATKIFMGLPAATGAAGSGFIPAN 182
           LFDYVWVQFYNN  CQYSSGNT NL+NSWNRWTS+I + +IFMGLPA++ AAGSGFIPAN
Sbjct: 199 LFDYVWVQFYNNXPCQYSSGNTNNLLNSWNRWTSSINS-RIFMGLPASSAAAGSGFIPAN 257

Query: 183 VLTSQVLPAIRTSAKYGGVMLWNKYFDDQSGYSSNIRSSV 302
           VLTSQ+LP I+ S KYGGVMLW+KY+DDQSGYSS+I+SSV
Sbjct: 258 VLTSQILPVIKRSXKYGGVMLWSKYYDDQSGYSSSIKSSV 297


Top