BLASTX nr result

ID: Coptis25_contig00000029 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00000029
         (1241 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272171.1| PREDICTED: uncharacterized protein LOC100251...   338   2e-90
ref|XP_002531072.1| conserved hypothetical protein [Ricinus comm...   325   2e-86
ref|XP_003626951.1| hypothetical protein MTR_8g012420 [Medicago ...   306   7e-81
ref|XP_004149773.1| PREDICTED: uncharacterized protein LOC101209...   303   6e-80
ref|XP_002884641.1| hypothetical protein ARALYDRAFT_896892 [Arab...   297   3e-78

>ref|XP_002272171.1| PREDICTED: uncharacterized protein LOC100251038 isoform 1 [Vitis
            vinifera]
          Length = 380

 Score =  338 bits (866), Expect = 2e-90
 Identities = 190/359 (52%), Positives = 248/359 (69%), Gaps = 7/359 (1%)
 Frame = +3

Query: 9    SRRSIRPLVVAVANAESREYKLSGVGTPLEPRSPEGLFLSGVLQNQRHLFPFAVSEQLNE 188
            S +S    +V VA+AE+    +S + TPLEPRS  G FLSGVLQNQR LF  AV+EQL +
Sbjct: 35   SSKSRSSSLVVVASAEA----ISSLNTPLEPRSLPGKFLSGVLQNQRQLFHVAVAEQLRD 90

Query: 189  LASDRDSAVARKEQSSGSI---ESLLHRRIAEMKENECQVAIEDVMYMSIVHKFSEIKVP 359
            LA DRD+A+AR   S GS    ES LHRRIAE+KE ECQ+A+EDVMY+ I +KFSEI+V 
Sbjct: 91   LADDRDAALARMNLSYGSSSSSESCLHRRIAELKERECQIAVEDVMYLLIFYKFSEIRVH 150

Query: 360  MVPKLSKCINDDRLEIWPSKCRELESFHSSEVQELIKEHLTTIMRLRGRYSTIVTSNTTK 539
            +VP+LS+CI + RLEIWP++   LE  H+ EV E+IKEHLTT++  + + +      TT+
Sbjct: 151  LVPRLSRCIYNGRLEIWPARDWALECIHNFEVLEMIKEHLTTVLGWKPKSNVTENWATTQ 210

Query: 540  IDRLHLGRIYAASIVYGYFLKSACLRHELDTSIAYTHDNIQPLGHGNYLS--VADLYPCG 713
            I R  LG+IYAASI+YGYFLKSA LRH L+ S+ ++H ++       + S  + DL+   
Sbjct: 211  IRRFQLGQIYAASILYGYFLKSASLRHHLEMSLVHSHHDLPSSNVSGFWSYGLKDLF--- 267

Query: 714  FNSIVTLGESTNTQATSLCQES--RSDTRHEKLSSYVMGMGSESLQRCAKLKSKEAVNLI 887
                  LG + ++Q TSL + S  + +   +KL  YVMG   ++LQRCAKLKSKEAVNL+
Sbjct: 268  ------LGPNCSSQPTSLGEASSRQEEKEEKKLRCYVMGFDPDTLQRCAKLKSKEAVNLV 321

Query: 888  EKHTWALFGDEKIGELDSGSDIVITFPSLERLVLEAVAFGSFLWDVERSVDSAYGLQEN 1064
            EKH+ ALFGDEK G L++   I  +F S++RLVLEAVAFGSFLWD E  V S Y L+EN
Sbjct: 322  EKHSCALFGDEKTGLLETDDVISTSFSSMKRLVLEAVAFGSFLWDTEEYVGSVYNLKEN 380


>ref|XP_002531072.1| conserved hypothetical protein [Ricinus communis]
            gi|223529318|gb|EEF31286.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 408

 Score =  325 bits (832), Expect = 2e-86
 Identities = 189/362 (52%), Positives = 241/362 (66%), Gaps = 8/362 (2%)
 Frame = +3

Query: 3    IYSRRSIRPLVVAVANAESREYKLSG-------VGTPLEPRSPEGLFLSGVLQNQRHLFP 161
            ++ R+ +R  +  VA A S   + S        + TPLEP S  G FLS V QNQR LF 
Sbjct: 49   LHRRKVLRAPLSVVARAGSSHCEPSSSSSSSFSLNTPLEPSSAAGKFLSSVFQNQRQLFH 108

Query: 162  FAVSEQLNELASDRDSAVARKEQSSGSIESLLHRRIAEMKENECQVAIEDVMYMSIVHKF 341
             AV+++L  LA  RD AV+R   SS S E+ LHRRIA++KE+ECQ+A+EDVMYM I  KF
Sbjct: 109  VAVADELKLLADARDDAVSRMFLSSRSDEASLHRRIAQLKEHECQIAVEDVMYMLIFSKF 168

Query: 342  SEIKVPMVPKLSKCINDDRLEIWPSKCRELESFHSSEVQELIKEHLTTIMRLRGRYSTIV 521
            SEI+VP+VPKLS+CI + RLEI PSK  ELES HS EV E+IKEH+ T++ LR   S   
Sbjct: 169  SEIRVPLVPKLSRCIYNGRLEIGPSKDWELESIHSFEVLEMIKEHVCTVIGLRANSSVTD 228

Query: 522  TSNTTKIDRLHLGRIYAASIVYGYFLKSACLRHELDTSIAYTHDNIQPLGHGNYLSVADL 701
            +  TT+I RL LGR+YAAS++YGYFLKSA LRH L+  IA +H N+  L         + 
Sbjct: 229  SWATTEIQRLQLGRVYAASVLYGYFLKSASLRHYLEQCIAVSHHNVH-LSCRTVRQYPES 287

Query: 702  YPCGFNSIVTLGESTNTQATSLCQES-RSDTRHEKLSSYVMGMGSESLQRCAKLKSKEAV 878
               G  +IV     +N Q+ S  Q S + D +  KL  YVMG  +E+LQRCAKLKSKEA+
Sbjct: 288  ISHGLTNIV-FRRISNMQSGSAGQGSIKQDWQRGKLRCYVMGFDAETLQRCAKLKSKEAM 346

Query: 879  NLIEKHTWALFGDEKIGELDSGSDIVITFPSLERLVLEAVAFGSFLWDVERSVDSAYGLQ 1058
            NLIEKH+ ALFG++  G L++   I+ +F SL+RLVLEAVAFGSFLWD E  V+S + L 
Sbjct: 347  NLIEKHSSALFGNDNTGSLENDEVILTSFSSLKRLVLEAVAFGSFLWDTEEYVNSIFKLS 406

Query: 1059 EN 1064
            EN
Sbjct: 407  EN 408


>ref|XP_003626951.1| hypothetical protein MTR_8g012420 [Medicago truncatula]
            gi|355520973|gb|AET01427.1| hypothetical protein
            MTR_8g012420 [Medicago truncatula]
          Length = 372

 Score =  306 bits (784), Expect = 7e-81
 Identities = 175/352 (49%), Positives = 233/352 (66%)
 Frame = +3

Query: 9    SRRSIRPLVVAVANAESREYKLSGVGTPLEPRSPEGLFLSGVLQNQRHLFPFAVSEQLNE 188
            S RS  PL+ A A A S   + S + TPL PR+  G FLSGVLQN R+LF  AV E+L  
Sbjct: 25   SFRSRVPLIKASAGASSH-CESSSLNTPLLPRTQVGKFLSGVLQNHRNLFHVAVQEELKL 83

Query: 189  LASDRDSAVARKEQSSGSIESLLHRRIAEMKENECQVAIEDVMYMSIVHKFSEIKVPMVP 368
            LA DRD+A +R   +S S E+LLHRRIAEMKEN+C+VA+ED+M + I HKFSEI+ P+VP
Sbjct: 84   LADDRDAANSRMLLASESDEALLHRRIAEMKENQCEVAVEDIMSLLIFHKFSEIRAPLVP 143

Query: 369  KLSKCINDDRLEIWPSKCRELESFHSSEVQELIKEHLTTIMRLRGRYSTIVTSNTTKIDR 548
            KLS+C+ + RLEI PSK  ELES H+ EV ++I+EH+TT+  L+ + S   +  TTK+ +
Sbjct: 144  KLSRCLYNGRLEILPSKDWELESIHTLEVLDMIREHVTTVTGLKAKPSVTESWATTKVRQ 203

Query: 549  LHLGRIYAASIVYGYFLKSACLRHELDTSIAYTHDNIQPLGHGNYLSVADLYPCGFNSIV 728
              LGRIY ASI+YGYFLKS  LR+ L+ ++   + ++ P GH   LS  D+ P GF   +
Sbjct: 204  FLLGRIYVASILYGYFLKSVSLRYHLERNLNLANHDVHP-GHRTNLSFKDMCPYGFEDDI 262

Query: 729  TLGESTNTQATSLCQESRSDTRHEKLSSYVMGMGSESLQRCAKLKSKEAVNLIEKHTWAL 908
              G  +N +        R +   E L  YVM     SLQRCAKL+SKEAVNL+  ++ AL
Sbjct: 263  -FGHLSNMKPIGQ-GLIRQEEEIEDLKCYVMRFHPGSLQRCAKLRSKEAVNLVRSYSSAL 320

Query: 909  FGDEKIGELDSGSDIVITFPSLERLVLEAVAFGSFLWDVERSVDSAYGLQEN 1064
            F  E    +DS   I+ +F SL+RLVLEAVAFGSFLW+ E  +D+ Y L+++
Sbjct: 321  FNSEGFDSVDSDDVILTSFSSLKRLVLEAVAFGSFLWETEDYIDNVYKLKDH 372


>ref|XP_004149773.1| PREDICTED: uncharacterized protein LOC101209314 [Cucumis sativus]
          Length = 388

 Score =  303 bits (776), Expect = 6e-80
 Identities = 176/355 (49%), Positives = 236/355 (66%), Gaps = 5/355 (1%)
 Frame = +3

Query: 15   RSIRPLVVAVANAESREYKLSGVGTPLEPRSPEGLFLSGVLQNQRHLFPFAVSEQLNELA 194
            RS   LV+A   A   E+    + TPL+P+S  G  LS VLQN RHLF  +V ++L  LA
Sbjct: 40   RSSSFLVLASTGASHCEF--GSLNTPLDPKSSVGKHLSRVLQNYRHLFHVSVEDELKLLA 97

Query: 195  SDRDSAVARKEQSSGSIESLLHRRIAEMKENECQVAIEDVMYMSIVHKFSEIKVPMVPKL 374
              RD+A+ R   S+ S E+LLHRRIA++KE+ECQ+A++DVMYM I ++FSEI+V +VPKL
Sbjct: 98   DHRDAALHRMLISAHSDEALLHRRIAQLKEHECQIAVQDVMYMLIFYRFSEIRVNLVPKL 157

Query: 375  SKCINDDRLEIWPSKCRELESFHSSEVQELIKEHLTTIMRLRGRYSTIVTSNTTKIDRLH 554
            S+C+ + RLEI P K  ELES +  EV  +IKEH+TT++ LR   S       T I + H
Sbjct: 158  SRCVYNGRLEILPCKDWELESIYELEVLGMIKEHITTVIGLRADSSVTDNWAMTNIRQAH 217

Query: 555  LGRIYAASIVYGYFLKSACLRHELDTSIAY--THDNIQPLGH-GNYLSVADLYPCGFNSI 725
            LGR+Y ASI+YGYFLKSA LRH L+  +A   TH N    GH   +L   ++   GF ++
Sbjct: 218  LGRVYVASILYGYFLKSAILRHHLEQKLAIPNTHRN---GGHPKTFLQFPEMCLYGFRNL 274

Query: 726  VTLGESTNTQATSLCQ--ESRSDTRHEKLSSYVMGMGSESLQRCAKLKSKEAVNLIEKHT 899
            ++ G  +N  +    Q   S  +T  EKL  ++ G  SE+LQRCAKLKSKEA+NLIE H+
Sbjct: 275  LS-GRLSNMLSVPHNQVLSSSQETEPEKLKRFLTGFDSEALQRCAKLKSKEALNLIENHS 333

Query: 900  WALFGDEKIGELDSGSDIVITFPSLERLVLEAVAFGSFLWDVERSVDSAYGLQEN 1064
            +AL G+E++G  ++   IV +F SL+RLVLEAVAFGSFLWD E  VD+ Y L+EN
Sbjct: 334  YALLGNEEVGFFENNEVIVTSFSSLKRLVLEAVAFGSFLWDAEEYVDTIYKLKEN 388


>ref|XP_002884641.1| hypothetical protein ARALYDRAFT_896892 [Arabidopsis lyrata subsp.
            lyrata] gi|297330481|gb|EFH60900.1| hypothetical protein
            ARALYDRAFT_896892 [Arabidopsis lyrata subsp. lyrata]
          Length = 371

 Score =  297 bits (761), Expect = 3e-78
 Identities = 170/347 (48%), Positives = 227/347 (65%), Gaps = 2/347 (0%)
 Frame = +3

Query: 30   LVVAVANAESREYKLSGVGTPLEPRSPEGLFLSGVLQNQRHLFPFAVSEQLNELASDRDS 209
            +VV  A   SR    S +  PLEPRS +G FL  VL N+R LF +A +++L +LA DR++
Sbjct: 44   MVVVAAAGPSRCEPGSSLNAPLEPRSAQGRFLRSVLLNKRQLFHYAAADELKQLADDREA 103

Query: 210  AVARKEQSSGSIESLLHRRIAEMKENECQVAIEDVMYMSIVHKFSEIKVPMVPKLSKCIN 389
            A+AR   SSGS E+ LHRRIA++KE  C+ A++D+MYM I +K+SEI+VP+VPKLS+CI 
Sbjct: 104  ALARMSLSSGSDEASLHRRIAQLKERYCKTAVQDIMYMLIFYKYSEIRVPLVPKLSRCIY 163

Query: 390  DDRLEIWPSKCRELESFHSSEVQELIKEHLTTIMRLRGRYSTIVTSN--TTKIDRLHLGR 563
            + RLEIWPSK  ELES HS +  E+IKEH++ ++ LR   ++ VT N  TT+I +LHL +
Sbjct: 164  NGRLEIWPSKDWELESIHSCDTLEIIKEHVSAVIGLR--VNSCVTDNWATTQIQKLHLRK 221

Query: 564  IYAASIVYGYFLKSACLRHELDTSIAYTHDNIQPLGHGNYLSVADLYPCGFNSIVTLGES 743
            +YAASI+YGYFLKSA LRH+L+ S+                  +DL+  G+     LG S
Sbjct: 222  VYAASILYGYFLKSASLRHQLECSL------------------SDLHGSGYLKSPILGCS 263

Query: 744  TNTQATSLCQESRSDTRHEKLSSYVMGMGSESLQRCAKLKSKEAVNLIEKHTWALFGDEK 923
              T    +   S+   RH     Y+ G   E+LQRCAK +++EA NLIEK + ALFG E 
Sbjct: 264  FTTSTAQI--SSKQQLRH-----YISGFDPETLQRCAKPRTEEARNLIEKQSLALFGTE- 315

Query: 924  IGELDSGSDIVITFPSLERLVLEAVAFGSFLWDVERSVDSAYGLQEN 1064
                +S   IV +F SL+RLVLEAVAFG+FLWD E  VD AY L+EN
Sbjct: 316  ----ESDETIVTSFSSLKRLVLEAVAFGTFLWDTELYVDGAYKLKEN 358


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