BLASTX nr result

ID: Coptis25_contig00000012 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00000012
         (532 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34644.3| unnamed protein product [Vitis vinifera]              212   3e-53
gb|AER42647.1| GTL1 [Populus tremula x Populus alba]                  202   3e-50
ref|XP_002317033.1| predicted protein [Populus trichocarpa] gi|2...   201   7e-50
ref|XP_002300534.1| predicted protein [Populus trichocarpa] gi|2...   199   2e-49
ref|XP_002518968.1| transcription factor, putative [Ricinus comm...   192   3e-47

>emb|CBI34644.3| unnamed protein product [Vitis vinifera]
          Length = 497

 Score =  212 bits (539), Expect = 3e-53
 Identities = 104/160 (65%), Positives = 121/160 (75%), Gaps = 4/160 (2%)
 Frame = +2

Query: 56  VLAAVPEQQHPPQEMVGGSGTSFDSASSRWPKQEVIALINLRSGLESKYQEAGPKGPLWE 235
           ++ A+PEQQ PPQ++  G G S +S+SSRWPK EV+ALINLRSGL+S+YQEAGPKGPLWE
Sbjct: 316 LVMAIPEQQVPPQDISSGGG-SLESSSSRWPKTEVLALINLRSGLDSRYQEAGPKGPLWE 374

Query: 236 EISSGMRQMGYNRSSKRCKEKWENINKYFKKVKESNKKRPEDAKTCPYFHQLDALYRKK- 412
           EIS+GM+QMGY RS+KRCKEKWENINKYFKKVKESNKKRPEDAKTCPYFHQLDALYRKK 
Sbjct: 375 EISAGMQQMGYKRSAKRCKEKWENINKYFKKVKESNKKRPEDAKTCPYFHQLDALYRKKL 434

Query: 413 ---TLXXXXXXXXXXXNQNKQEDSMAIDPPSNLQAIMAPP 523
              T            N N+ E+     PP   ++    P
Sbjct: 435 LGSTSGSGGSGGSTYVNPNRPEEQQQQQPPPQHESAKLDP 474



 Score =  100 bits (248), Expect = 2e-19
 Identities = 42/96 (43%), Positives = 72/96 (75%)
 Frame = +2

Query: 128 SASSRWPKQEVIALINLRSGLESKYQEAGPKGPLWEEISSGMRQMGYNRSSKRCKEKWEN 307
           ++ +RWP+QE +AL+ +RS ++  +++A  KGPLWE++S  + ++GY+RS+K+CKEK+EN
Sbjct: 98  ASGNRWPRQETLALLKIRSEMDVAFRDATLKGPLWEDVSRKLAELGYSRSAKKCKEKFEN 157

Query: 308 INKYFKKVKESNKKRPEDAKTCPYFHQLDALYRKKT 415
           ++KY+K+ KE    R +D K+  +F QL+AL+   T
Sbjct: 158 VHKYYKRTKEGRAGR-QDGKSYRFFSQLEALHSTAT 192


>gb|AER42647.1| GTL1 [Populus tremula x Populus alba]
          Length = 795

 Score =  202 bits (513), Expect = 3e-50
 Identities = 101/138 (73%), Positives = 113/138 (81%)
 Frame = +2

Query: 5   QTQATEIARHQPASSEIVLAAVPEQQHPPQEMVGGSGTSFDSASSRWPKQEVIALINLRS 184
           Q Q     R  P+ S  ++ AVPEQQ  P E+  GSG S + ASSRWPK EV+ALI LRS
Sbjct: 481 QHQQVHHPRQPPSISSDIVMAVPEQQIAPLEL--GSGGS-EPASSRWPKPEVLALIKLRS 537

Query: 185 GLESKYQEAGPKGPLWEEISSGMRQMGYNRSSKRCKEKWENINKYFKKVKESNKKRPEDA 364
           GLE++YQEAGPKGPLWEEIS+GM ++GY RSSKRCKEKWENINKYFKKVKESNKKRPEDA
Sbjct: 538 GLETRYQEAGPKGPLWEEISAGMLRLGYKRSSKRCKEKWENINKYFKKVKESNKKRPEDA 597

Query: 365 KTCPYFHQLDALYRKKTL 418
           KTCPYFH+LDALYRKK L
Sbjct: 598 KTCPYFHELDALYRKKIL 615



 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 41/91 (45%), Positives = 70/91 (76%)
 Frame = +2

Query: 128 SASSRWPKQEVIALINLRSGLESKYQEAGPKGPLWEEISSGMRQMGYNRSSKRCKEKWEN 307
           ++ +RWP+QE +AL+ +RS +++ +++A  KGPLWE++S  + +MGY RS+K+CKEK+EN
Sbjct: 104 ASGNRWPRQETLALLQIRSEMDAAFRDATLKGPLWEDVSRKLAEMGYKRSAKKCKEKFEN 163

Query: 308 INKYFKKVKESNKKRPEDAKTCPYFHQLDAL 400
           ++KY+K+ K+    R +D K+  +F QL+AL
Sbjct: 164 VHKYYKRTKDGRAGR-QDGKSYRFFSQLEAL 193


>ref|XP_002317033.1| predicted protein [Populus trichocarpa] gi|222860098|gb|EEE97645.1|
           predicted protein [Populus trichocarpa]
          Length = 467

 Score =  201 bits (510), Expect = 7e-50
 Identities = 99/139 (71%), Positives = 112/139 (80%)
 Frame = +2

Query: 2   TQTQATEIARHQPASSEIVLAAVPEQQHPPQEMVGGSGTSFDSASSRWPKQEVIALINLR 181
           TQ +A         +S I+  AVPEQQ  PQE+  G G+  + ASSRWPK EV+ALI LR
Sbjct: 142 TQLEALHNTTGSGGASAIM--AVPEQQIIPQEIGSGGGSGSEPASSRWPKPEVLALIKLR 199

Query: 182 SGLESKYQEAGPKGPLWEEISSGMRQMGYNRSSKRCKEKWENINKYFKKVKESNKKRPED 361
           SGLE+KYQEAGPKGPLWEEIS+GM++MGY RS+KRCKEKWENINKYFKKVKESNK R ED
Sbjct: 200 SGLETKYQEAGPKGPLWEEISTGMQRMGYKRSAKRCKEKWENINKYFKKVKESNKNRSED 259

Query: 362 AKTCPYFHQLDALYRKKTL 418
           AKTCPYFH+LDALYRKK L
Sbjct: 260 AKTCPYFHELDALYRKKIL 278



 Score = 97.8 bits (242), Expect = 9e-19
 Identities = 41/92 (44%), Positives = 70/92 (76%)
 Frame = +2

Query: 128 SASSRWPKQEVIALINLRSGLESKYQEAGPKGPLWEEISSGMRQMGYNRSSKRCKEKWEN 307
           ++ +RWP+QE  AL+ +RS +++ +++A  KGPLWE++S  + +MGY R++K+CKEK+EN
Sbjct: 58  ASGNRWPRQETHALLQIRSEMDAAFRDATLKGPLWEDVSRKLAEMGYKRNAKKCKEKFEN 117

Query: 308 INKYFKKVKESNKKRPEDAKTCPYFHQLDALY 403
           ++KY+K+ KE    R +D K+  +F QL+AL+
Sbjct: 118 VHKYYKRTKEGRAGR-QDGKSYRFFTQLEALH 148


>ref|XP_002300534.1| predicted protein [Populus trichocarpa] gi|222847792|gb|EEE85339.1|
           predicted protein [Populus trichocarpa]
          Length = 580

 Score =  199 bits (506), Expect = 2e-49
 Identities = 103/132 (78%), Positives = 114/132 (86%), Gaps = 2/132 (1%)
 Frame = +2

Query: 29  RHQPAS--SEIVLAAVPEQQHPPQEMVGGSGTSFDSASSRWPKQEVIALINLRSGLESKY 202
           +HQP S  SEIV+A VPEQQ  P E+  GSG S + ASSRWPK EV+ALI LRSGLE++Y
Sbjct: 442 QHQPPSISSEIVMA-VPEQQIAPLEL--GSGGS-EPASSRWPKPEVLALIKLRSGLETRY 497

Query: 203 QEAGPKGPLWEEISSGMRQMGYNRSSKRCKEKWENINKYFKKVKESNKKRPEDAKTCPYF 382
           QEAGPKGPLWEEIS+GM ++GY RSSKRCKEKWENINKYFKKVKESNKKR EDAKTCPYF
Sbjct: 498 QEAGPKGPLWEEISAGMLRLGYKRSSKRCKEKWENINKYFKKVKESNKKRTEDAKTCPYF 557

Query: 383 HQLDALYRKKTL 418
           H+LDALYRKK L
Sbjct: 558 HELDALYRKKIL 569



 Score =  100 bits (249), Expect = 1e-19
 Identities = 42/91 (46%), Positives = 70/91 (76%)
 Frame = +2

Query: 128 SASSRWPKQEVIALINLRSGLESKYQEAGPKGPLWEEISSGMRQMGYNRSSKRCKEKWEN 307
           ++ +RWP+QE +AL+ +RS +++ +++A  KGPLWE++S  + +MGY RS+K+CKEK+EN
Sbjct: 57  ASGNRWPRQETLALLQIRSEMDAAFRDATLKGPLWEDVSRKLAEMGYKRSAKKCKEKFEN 116

Query: 308 INKYFKKVKESNKKRPEDAKTCPYFHQLDAL 400
           ++KY+K+ KE    R +D K+  +F QL+AL
Sbjct: 117 VHKYYKRTKEGRAGR-QDGKSYRFFSQLEAL 146


>ref|XP_002518968.1| transcription factor, putative [Ricinus communis]
           gi|223541955|gb|EEF43501.1| transcription factor,
           putative [Ricinus communis]
          Length = 741

 Score =  192 bits (487), Expect = 3e-47
 Identities = 95/139 (68%), Positives = 109/139 (78%), Gaps = 1/139 (0%)
 Frame = +2

Query: 5   QTQATEIARHQPASSEIVLA-AVPEQQHPPQEMVGGSGTSFDSASSRWPKQEVIALINLR 181
           Q    ++ RH    S I    A+   +  PQE+  GS  S + +SSRWPK EV+ALI LR
Sbjct: 427 QQDKHQVHRHHDRQSSISSELAIGVAEGMPQEI--GSSRSLEPSSSRWPKAEVLALIKLR 484

Query: 182 SGLESKYQEAGPKGPLWEEISSGMRQMGYNRSSKRCKEKWENINKYFKKVKESNKKRPED 361
           SGLE +YQEAGPKGPLWEEIS+GM++MGY RS+KRCKEKWENINKYFKKVKESNKKRPED
Sbjct: 485 SGLEFRYQEAGPKGPLWEEISAGMQRMGYKRSAKRCKEKWENINKYFKKVKESNKKRPED 544

Query: 362 AKTCPYFHQLDALYRKKTL 418
           AKTCPYFH+LDALYRKK L
Sbjct: 545 AKTCPYFHELDALYRKKVL 563



 Score =  103 bits (258), Expect = 1e-20
 Identities = 52/133 (39%), Positives = 84/133 (63%), Gaps = 15/133 (11%)
 Frame = +2

Query: 50  EIVLAAVPEQQHPPQEMVGG-------SGTSFD--------SASSRWPKQEVIALINLRS 184
           ++V  A P    PP    G        SG++ D        ++ +RWP+QE IAL+ +RS
Sbjct: 36  QLVEEASPISSRPPATTGGNLDDFMRLSGSAADEDELADRATSGNRWPRQETIALLQIRS 95

Query: 185 GLESKYQEAGPKGPLWEEISSGMRQMGYNRSSKRCKEKWENINKYFKKVKESNKKRPEDA 364
            +++ +++A  KGPLWE++S  + ++GY RS+K+CKEK+EN++KY+K+ KE    R +D 
Sbjct: 96  DMDAAFRDATVKGPLWEDVSRKLNELGYKRSAKKCKEKFENVHKYYKRTKEGRGGR-QDG 154

Query: 365 KTCPYFHQLDALY 403
           KT  +F QL+AL+
Sbjct: 155 KTYRFFTQLEALH 167


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