BLASTX nr result

ID: Coptis25_contig00000003 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00000003
         (881 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634753.1| PREDICTED: ABC transporter C family member 3...   357   2e-96
emb|CBI39697.3| unnamed protein product [Vitis vinifera]              357   2e-96
ref|XP_003617730.1| Multidrug resistance protein ABC transporter...   356   3e-96
ref|XP_003518544.1| PREDICTED: ABC transporter C family member 3...   355   6e-96
ref|XP_003519622.1| PREDICTED: ABC transporter C family member 3...   354   1e-95

>ref|XP_003634753.1| PREDICTED: ABC transporter C family member 3-like [Vitis vinifera]
          Length = 1488

 Score =  357 bits (916), Expect = 2e-96
 Identities = 182/217 (83%), Positives = 195/217 (89%)
 Frame = -2

Query: 880  KTGVVGRTGSGKSTLIQTLFRIVEPATGQILIDGLNISTIGLHDLRSRLSIIPQDPTMFE 701
            KTG+VGRTGSGKSTLIQTLFRIVEPA GQI IDG NIS+IGLHDLRSRLSIIPQDPTMFE
Sbjct: 1267 KTGIVGRTGSGKSTLIQTLFRIVEPAAGQITIDGTNISSIGLHDLRSRLSIIPQDPTMFE 1326

Query: 700  GTVRSNLDPLEEHTDEQIWEALDKCQLGNEVRKKEGKLDSTVTENGENWSMGQRQLVCXX 521
            GTVRSNLDPLEE++DEQIWEALDKCQLG+EVRKKEGKLDS VTENGENWSMGQRQLVC  
Sbjct: 1327 GTVRSNLDPLEEYSDEQIWEALDKCQLGDEVRKKEGKLDSAVTENGENWSMGQRQLVCLG 1386

Query: 520  XXXXXXXXXXXLDEATASVDTATDNLIQQTLRQHFSDSTVITIAHRITSVIDSDMVLLLD 341
                       LDEATASVDTATDNLIQQTLRQHF DSTVITIAHRITSV+DSDMVLLLD
Sbjct: 1387 RVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHFVDSTVITIAHRITSVLDSDMVLLLD 1446

Query: 340  NGLIMEYDSPSKLLEDKSSLFSKLVAEYTARSNSSFE 230
            +GL+ EYD+P++LLE+KSS F+KLVAEYT RSNSS E
Sbjct: 1447 HGLVEEYDTPTRLLENKSSSFAKLVAEYTVRSNSSLE 1483


>emb|CBI39697.3| unnamed protein product [Vitis vinifera]
          Length = 1284

 Score =  357 bits (916), Expect = 2e-96
 Identities = 182/217 (83%), Positives = 195/217 (89%)
 Frame = -2

Query: 880  KTGVVGRTGSGKSTLIQTLFRIVEPATGQILIDGLNISTIGLHDLRSRLSIIPQDPTMFE 701
            KTG+VGRTGSGKSTLIQTLFRIVEPA GQI IDG NIS+IGLHDLRSRLSIIPQDPTMFE
Sbjct: 1063 KTGIVGRTGSGKSTLIQTLFRIVEPAAGQITIDGTNISSIGLHDLRSRLSIIPQDPTMFE 1122

Query: 700  GTVRSNLDPLEEHTDEQIWEALDKCQLGNEVRKKEGKLDSTVTENGENWSMGQRQLVCXX 521
            GTVRSNLDPLEE++DEQIWEALDKCQLG+EVRKKEGKLDS VTENGENWSMGQRQLVC  
Sbjct: 1123 GTVRSNLDPLEEYSDEQIWEALDKCQLGDEVRKKEGKLDSAVTENGENWSMGQRQLVCLG 1182

Query: 520  XXXXXXXXXXXLDEATASVDTATDNLIQQTLRQHFSDSTVITIAHRITSVIDSDMVLLLD 341
                       LDEATASVDTATDNLIQQTLRQHF DSTVITIAHRITSV+DSDMVLLLD
Sbjct: 1183 RVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHFVDSTVITIAHRITSVLDSDMVLLLD 1242

Query: 340  NGLIMEYDSPSKLLEDKSSLFSKLVAEYTARSNSSFE 230
            +GL+ EYD+P++LLE+KSS F+KLVAEYT RSNSS E
Sbjct: 1243 HGLVEEYDTPTRLLENKSSSFAKLVAEYTVRSNSSLE 1279


>ref|XP_003617730.1| Multidrug resistance protein ABC transporter family [Medicago
            truncatula] gi|355519065|gb|AET00689.1| Multidrug
            resistance protein ABC transporter family [Medicago
            truncatula]
          Length = 1521

 Score =  356 bits (914), Expect = 3e-96
 Identities = 180/216 (83%), Positives = 195/216 (90%)
 Frame = -2

Query: 880  KTGVVGRTGSGKSTLIQTLFRIVEPATGQILIDGLNISTIGLHDLRSRLSIIPQDPTMFE 701
            KTG+VGRTGSGKSTLIQTLFR+VEP  G+++ID +NISTIGLHDLRSRLSIIPQDPTMFE
Sbjct: 1306 KTGIVGRTGSGKSTLIQTLFRLVEPTAGEVIIDRINISTIGLHDLRSRLSIIPQDPTMFE 1365

Query: 700  GTVRSNLDPLEEHTDEQIWEALDKCQLGNEVRKKEGKLDSTVTENGENWSMGQRQLVCXX 521
            GTVRSNLDPLEE+TDEQIWEALDKCQLG+EVRKKEGKLDS+V+ENGENWSMGQRQLVC  
Sbjct: 1366 GTVRSNLDPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSSVSENGENWSMGQRQLVCLG 1425

Query: 520  XXXXXXXXXXXLDEATASVDTATDNLIQQTLRQHFSDSTVITIAHRITSVIDSDMVLLLD 341
                       LDEATASVDTATDNLIQQTLRQHF+DSTVITIAHRITSV+DSDMVLLLD
Sbjct: 1426 RVLLKKSKILVLDEATASVDTATDNLIQQTLRQHFTDSTVITIAHRITSVLDSDMVLLLD 1485

Query: 340  NGLIMEYDSPSKLLEDKSSLFSKLVAEYTARSNSSF 233
             GLI EYDSP+ LLEDKSS F+KLVAEYT RSNS+F
Sbjct: 1486 QGLIEEYDSPTTLLEDKSSSFAKLVAEYTMRSNSNF 1521


>ref|XP_003518544.1| PREDICTED: ABC transporter C family member 3-like [Glycine max]
          Length = 2054

 Score =  355 bits (912), Expect = 6e-96
 Identities = 180/217 (82%), Positives = 195/217 (89%)
 Frame = -2

Query: 880  KTGVVGRTGSGKSTLIQTLFRIVEPATGQILIDGLNISTIGLHDLRSRLSIIPQDPTMFE 701
            KTG+VGRTGSGKSTLIQTLFRIVEP  GQ++ID +NIS+IGLHDLRSRLSIIPQDPTMFE
Sbjct: 1833 KTGIVGRTGSGKSTLIQTLFRIVEPTAGQVMIDNINISSIGLHDLRSRLSIIPQDPTMFE 1892

Query: 700  GTVRSNLDPLEEHTDEQIWEALDKCQLGNEVRKKEGKLDSTVTENGENWSMGQRQLVCXX 521
            GTVR+NLDPLEE+TDEQIWEALDKCQLG+EVRKKEGKLDS VTENGENWSMGQRQLVC  
Sbjct: 1893 GTVRNNLDPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLG 1952

Query: 520  XXXXXXXXXXXLDEATASVDTATDNLIQQTLRQHFSDSTVITIAHRITSVIDSDMVLLLD 341
                       LDEATASVDTATDNLIQQTLRQHFSDSTVITIAHRITSV+DSDMVLLL 
Sbjct: 1953 RVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHFSDSTVITIAHRITSVLDSDMVLLLS 2012

Query: 340  NGLIMEYDSPSKLLEDKSSLFSKLVAEYTARSNSSFE 230
             GLI EYD+P++LLE+KSS F++LVAEYT RSNSSFE
Sbjct: 2013 QGLIEEYDTPTRLLENKSSSFAQLVAEYTMRSNSSFE 2049


>ref|XP_003519622.1| PREDICTED: ABC transporter C family member 3-like [Glycine max]
          Length = 1493

 Score =  354 bits (909), Expect = 1e-95
 Identities = 179/217 (82%), Positives = 195/217 (89%)
 Frame = -2

Query: 880  KTGVVGRTGSGKSTLIQTLFRIVEPATGQILIDGLNISTIGLHDLRSRLSIIPQDPTMFE 701
            KTG+VGRTGSGKSTLIQTLFRIVEP  GQ++ID +NIS+IGLHDLRSRLSIIPQDPTMFE
Sbjct: 1272 KTGIVGRTGSGKSTLIQTLFRIVEPTAGQVMIDSINISSIGLHDLRSRLSIIPQDPTMFE 1331

Query: 700  GTVRSNLDPLEEHTDEQIWEALDKCQLGNEVRKKEGKLDSTVTENGENWSMGQRQLVCXX 521
            GTVR+NLDPLEE+TDE+IWEALDKCQLG+EVRKKEGKLDS VTENGENWSMGQRQLVC  
Sbjct: 1332 GTVRNNLDPLEEYTDEEIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLG 1391

Query: 520  XXXXXXXXXXXLDEATASVDTATDNLIQQTLRQHFSDSTVITIAHRITSVIDSDMVLLLD 341
                       LDEATASVDTATDNLIQQTLRQHFSDSTVITIAHRITSV+DSDMVLLL 
Sbjct: 1392 RVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHFSDSTVITIAHRITSVLDSDMVLLLS 1451

Query: 340  NGLIMEYDSPSKLLEDKSSLFSKLVAEYTARSNSSFE 230
             GLI EYD+P++LLE+KSS F++LVAEYT RSNSSFE
Sbjct: 1452 QGLIEEYDTPTRLLENKSSSFAQLVAEYTMRSNSSFE 1488


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