BLASTX nr result

ID: Coptis25_contig00000001 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00000001
         (200 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532138.1| conserved hypothetical protein [Ricinus comm...    94   9e-18
ref|XP_002275843.2| PREDICTED: allantoate deiminase, chloroplast...    94   1e-17
emb|CBI27216.3| unnamed protein product [Vitis vinifera]               94   1e-17
ref|XP_002326632.1| predicted protein [Populus trichocarpa] gi|2...    94   1e-17
ref|XP_002869950.1| hypothetical protein ARALYDRAFT_914645 [Arab...    92   4e-17

>ref|XP_002532138.1| conserved hypothetical protein [Ricinus communis]
           gi|223528174|gb|EEF30237.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 436

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 49/62 (79%), Positives = 54/62 (87%)
 Frame = -1

Query: 200 VIAFSDEEGVRFQTAFLGSAALAGTLPVSALLISDKSGATVQHALKENSFEGTEESLLQL 21
           VIAFSDEEGVRFQ+ FLGSAA+AG LPVSAL ISDKSG TVQ +LKENS   TEES+LQ+
Sbjct: 119 VIAFSDEEGVRFQSTFLGSAAVAGILPVSALQISDKSGVTVQDSLKENSIGITEESMLQM 178

Query: 20  KY 15
           KY
Sbjct: 179 KY 180


>ref|XP_002275843.2| PREDICTED: allantoate deiminase, chloroplastic-like [Vitis
           vinifera]
          Length = 492

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 48/62 (77%), Positives = 53/62 (85%)
 Frame = -1

Query: 200 VIAFSDEEGVRFQTAFLGSAALAGTLPVSALLISDKSGATVQHALKENSFEGTEESLLQL 21
           VIAFSDEEGVRFQ+ FLGSAA+AG LP SAL ISDKSG TVQ+AL +NS E TEE+L QL
Sbjct: 175 VIAFSDEEGVRFQSTFLGSAAVAGVLPASALQISDKSGVTVQNALMDNSIEATEETLSQL 234

Query: 20  KY 15
           KY
Sbjct: 235 KY 236


>emb|CBI27216.3| unnamed protein product [Vitis vinifera]
          Length = 478

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 48/62 (77%), Positives = 53/62 (85%)
 Frame = -1

Query: 200 VIAFSDEEGVRFQTAFLGSAALAGTLPVSALLISDKSGATVQHALKENSFEGTEESLLQL 21
           VIAFSDEEGVRFQ+ FLGSAA+AG LP SAL ISDKSG TVQ+AL +NS E TEE+L QL
Sbjct: 161 VIAFSDEEGVRFQSTFLGSAAVAGVLPASALQISDKSGVTVQNALMDNSIEATEETLSQL 220

Query: 20  KY 15
           KY
Sbjct: 221 KY 222


>ref|XP_002326632.1| predicted protein [Populus trichocarpa] gi|222833954|gb|EEE72431.1|
           predicted protein [Populus trichocarpa]
          Length = 442

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 50/62 (80%), Positives = 52/62 (83%)
 Frame = -1

Query: 200 VIAFSDEEGVRFQTAFLGSAALAGTLPVSALLISDKSGATVQHALKENSFEGTEESLLQL 21
           VIAFSDEEGVRFQ+ FLGSAA+AG LPVSAL ISDKSG  VQ ALKENS   TEESL QL
Sbjct: 154 VIAFSDEEGVRFQSTFLGSAAVAGILPVSALQISDKSGVNVQDALKENSIAITEESLFQL 213

Query: 20  KY 15
           KY
Sbjct: 214 KY 215


>ref|XP_002869950.1| hypothetical protein ARALYDRAFT_914645 [Arabidopsis lyrata subsp.
           lyrata] gi|297315786|gb|EFH46209.1| hypothetical protein
           ARALYDRAFT_914645 [Arabidopsis lyrata subsp. lyrata]
          Length = 529

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 47/66 (71%), Positives = 55/66 (83%)
 Frame = -1

Query: 200 VIAFSDEEGVRFQTAFLGSAALAGTLPVSALLISDKSGATVQHALKENSFEGTEESLLQL 21
           VIAFSDEEGVRFQ+ FLGSAALAG +PVS L ++DKSG +VQ ALKENS + TEE+L+QL
Sbjct: 212 VIAFSDEEGVRFQSTFLGSAALAGIMPVSRLEVTDKSGISVQDALKENSIDITEENLMQL 271

Query: 20  KYKEGS 3
           KY   S
Sbjct: 272 KYDPAS 277


Top