BLASTX nr result

ID: Coptis24_contig00039987 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00039987
         (272 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN60856.1| hypothetical protein VITISV_026074 [Vitis vinifera]    70   2e-10
ref|XP_002275476.2| PREDICTED: ubiquitin carboxyl-terminal hydro...    69   4e-10
emb|CBI21539.3| unnamed protein product [Vitis vinifera]               69   4e-10
ref|XP_002310049.1| predicted protein [Populus trichocarpa] gi|2...    66   3e-09
ref|XP_002532774.1| ubiquitin-specific protease, putative [Ricin...    61   8e-08

>emb|CAN60856.1| hypothetical protein VITISV_026074 [Vitis vinifera]
          Length = 559

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 37/65 (56%), Positives = 46/65 (70%), Gaps = 2/65 (3%)
 Frame = +1

Query: 1   GHYTVYRRVKEESNGEDSVRQGKPA--QWLCASDSKVFSVSERDVFTAEASMLFYERIEV 174
           GHYTVYRRV+ E   E    Q  P+   W C SDS+V+SVSE+DV  AEAS+LFYERI V
Sbjct: 472 GHYTVYRRVRTEQEKEFHNGQFAPSLGHWFCISDSQVYSVSEKDVLXAEASLLFYERI-V 530

Query: 175 SKQVP 189
            +++P
Sbjct: 531 DEKIP 535


>ref|XP_002275476.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 27-like [Vitis
           vinifera]
          Length = 641

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 35/58 (60%), Positives = 41/58 (70%), Gaps = 2/58 (3%)
 Frame = +1

Query: 1   GHYTVYRRVKEESNGEDSVRQGKPA--QWLCASDSKVFSVSERDVFTAEASMLFYERI 168
           GHYTVYRRV+ E   E    Q  P+   W C SDS+V+SVSE+DV  AEAS+LFYERI
Sbjct: 527 GHYTVYRRVRTEQEKEFHNGQFAPSLGHWFCISDSQVYSVSEKDVLAAEASLLFYERI 584


>emb|CBI21539.3| unnamed protein product [Vitis vinifera]
          Length = 532

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 35/58 (60%), Positives = 41/58 (70%), Gaps = 2/58 (3%)
 Frame = +1

Query: 1   GHYTVYRRVKEESNGEDSVRQGKPA--QWLCASDSKVFSVSERDVFTAEASMLFYERI 168
           GHYTVYRRV+ E   E    Q  P+   W C SDS+V+SVSE+DV  AEAS+LFYERI
Sbjct: 472 GHYTVYRRVRTEQEKEFHNGQFAPSLGHWFCISDSQVYSVSEKDVLAAEASLLFYERI 529


>ref|XP_002310049.1| predicted protein [Populus trichocarpa] gi|222852952|gb|EEE90499.1|
           predicted protein [Populus trichocarpa]
          Length = 382

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 33/58 (56%), Positives = 39/58 (67%), Gaps = 2/58 (3%)
 Frame = +1

Query: 1   GHYTVYRRVKEESNGEDSVRQGKPA--QWLCASDSKVFSVSERDVFTAEASMLFYERI 168
           GHYTVYR ++ ES+ E      KP+   W C SDS V+ VSE DV  AEAS+LFYERI
Sbjct: 322 GHYTVYRSLQSESHEEHPDENCKPSLMHWFCISDSNVYRVSEEDVLAAEASLLFYERI 379


>ref|XP_002532774.1| ubiquitin-specific protease, putative [Ricinus communis]
           gi|223527484|gb|EEF29613.1| ubiquitin-specific protease,
           putative [Ricinus communis]
          Length = 503

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 34/58 (58%), Positives = 38/58 (65%), Gaps = 2/58 (3%)
 Frame = +1

Query: 1   GHYTVYRRVKEESNGEDSVRQGKPA--QWLCASDSKVFSVSERDVFTAEASMLFYERI 168
           GHYTVYR V  +S  E +     P+  QW C SDS V SVSE DV  AEAS+LFYERI
Sbjct: 446 GHYTVYRSVISKSPKECTDETLNPSIPQWFCISDSDVQSVSEEDVLAAEASILFYERI 503


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