BLASTX nr result
ID: Coptis24_contig00039957
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00039957 (324 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003555438.1| PREDICTED: tricalbin-1-like [Glycine max] 123 9e-31 ref|XP_002272997.1| PREDICTED: extended synaptotagmin-2 [Vitis v... 119 1e-30 ref|XP_002311084.1| predicted protein [Populus trichocarpa] gi|2... 116 2e-30 ref|XP_002873140.1| plant synaptotagmin [Arabidopsis lyrata subs... 110 4e-30 ref|XP_004157531.1| PREDICTED: synaptotagmin-3-like [Cucumis sat... 116 6e-30 >ref|XP_003555438.1| PREDICTED: tricalbin-1-like [Glycine max] Length = 545 Score = 123 bits (309), Expect(2) = 9e-31 Identities = 57/81 (70%), Positives = 68/81 (83%) Frame = +1 Query: 79 LVDLQIFATPRITWTPLVPTFPCFANVVISLMEKPHIDFGMKVLGGDVMAIPGLYRFVQE 258 LVDLQIFA PR+T PLVPTFPCFAN+V+SLMEKPH+DFGM VLGGD+M+IPGLYRFVQE Sbjct: 169 LVDLQIFAAPRVTLRPLVPTFPCFANIVVSLMEKPHVDFGMNVLGGDIMSIPGLYRFVQE 228 Query: 259 TIKKKLRDSTSGPKYWKYPFL 321 TIKK++ + P+ + P L Sbjct: 229 TIKKQVANLYLWPQTLEIPIL 249 Score = 35.0 bits (79), Expect(2) = 9e-31 Identities = 15/28 (53%), Positives = 20/28 (71%) Frame = +2 Query: 5 EPVFKWAGNPDITLVLKILSLRIVVWLI 88 E V KWAGNP+I L + + SL+I V L+ Sbjct: 143 EQVIKWAGNPEIVLSVYVASLKITVQLV 170 >ref|XP_002272997.1| PREDICTED: extended synaptotagmin-2 [Vitis vinifera] gi|296086005|emb|CBI31446.3| unnamed protein product [Vitis vinifera] Length = 544 Score = 119 bits (298), Expect(2) = 1e-30 Identities = 55/81 (67%), Positives = 68/81 (83%) Frame = +1 Query: 79 LVDLQIFATPRITWTPLVPTFPCFANVVISLMEKPHIDFGMKVLGGDVMAIPGLYRFVQE 258 LVDLQIFA PRIT PLVPTFPCFA++V+SLMEKPH+DFG+K+LGGD+M+IPGLYRFVQE Sbjct: 169 LVDLQIFAAPRITLKPLVPTFPCFASLVLSLMEKPHVDFGLKILGGDIMSIPGLYRFVQE 228 Query: 259 TIKKKLRDSTSGPKYWKYPFL 321 TIK+++ P+ + P L Sbjct: 229 TIKREVAKLYLWPQTLEIPIL 249 Score = 38.9 bits (89), Expect(2) = 1e-30 Identities = 17/28 (60%), Positives = 20/28 (71%) Frame = +2 Query: 5 EPVFKWAGNPDITLVLKILSLRIVVWLI 88 EP KWAGNP+I LVLK L RI + L+ Sbjct: 143 EPAIKWAGNPNIILVLKWLPFRITIQLV 170 >ref|XP_002311084.1| predicted protein [Populus trichocarpa] gi|222850904|gb|EEE88451.1| predicted protein [Populus trichocarpa] Length = 547 Score = 116 bits (291), Expect(2) = 2e-30 Identities = 53/81 (65%), Positives = 65/81 (80%) Frame = +1 Query: 79 LVDLQIFATPRITWTPLVPTFPCFANVVISLMEKPHIDFGMKVLGGDVMAIPGLYRFVQE 258 LVDLQIFA PR+ PLVPTFPCFAN+++SLME+PH+DFG+K+LGGDVM+IPGLYRFVQE Sbjct: 170 LVDLQIFAAPRVALKPLVPTFPCFANILVSLMERPHVDFGLKILGGDVMSIPGLYRFVQE 229 Query: 259 TIKKKLRDSTSGPKYWKYPFL 321 IKK++ P+ P L Sbjct: 230 MIKKQVASLYLWPQTLDIPIL 250 Score = 41.2 bits (95), Expect(2) = 2e-30 Identities = 16/28 (57%), Positives = 23/28 (82%) Frame = +2 Query: 5 EPVFKWAGNPDITLVLKILSLRIVVWLI 88 EP +WAGNP+I LVLK++SL++ V L+ Sbjct: 144 EPAIRWAGNPNIVLVLKLMSLQVTVQLV 171 >ref|XP_002873140.1| plant synaptotagmin [Arabidopsis lyrata subsp. lyrata] gi|297318977|gb|EFH49399.1| plant synaptotagmin [Arabidopsis lyrata subsp. lyrata] Length = 549 Score = 110 bits (275), Expect(2) = 4e-30 Identities = 51/81 (62%), Positives = 63/81 (77%) Frame = +1 Query: 79 LVDLQIFATPRITWTPLVPTFPCFANVVISLMEKPHIDFGMKVLGGDVMAIPGLYRFVQE 258 LVDLQ FA R+ PL+PTFPCF VV+SLMEKPH+DFG+KVLGGDVM+IPGLYR+VQE Sbjct: 169 LVDLQFFAIVRVALKPLLPTFPCFGMVVVSLMEKPHVDFGLKVLGGDVMSIPGLYRYVQE 228 Query: 259 TIKKKLRDSTSGPKYWKYPFL 321 TIK+++ P+ + P L Sbjct: 229 TIKRQVSSMYHWPQVLEIPIL 249 Score = 45.8 bits (107), Expect(2) = 4e-30 Identities = 21/29 (72%), Positives = 24/29 (82%) Frame = +2 Query: 2 FEPVFKWAGNPDITLVLKILSLRIVVWLI 88 FEP KWAGNP+I LVLK+LSLRI V L+ Sbjct: 142 FEPSIKWAGNPNIVLVLKVLSLRIRVQLV 170 >ref|XP_004157531.1| PREDICTED: synaptotagmin-3-like [Cucumis sativus] Length = 539 Score = 116 bits (291), Expect(2) = 6e-30 Identities = 51/81 (62%), Positives = 66/81 (81%) Frame = +1 Query: 79 LVDLQIFATPRITWTPLVPTFPCFANVVISLMEKPHIDFGMKVLGGDVMAIPGLYRFVQE 258 +VDLQ+FATPR+ PLVPTFPCFAN++ SLMEKP IDFG+K++GGD+M+IPGLYRF+QE Sbjct: 169 IVDLQLFATPRLALKPLVPTFPCFANIIASLMEKPQIDFGLKIMGGDIMSIPGLYRFIQE 228 Query: 259 TIKKKLRDSTSGPKYWKYPFL 321 TIKK++ P+ + P L Sbjct: 229 TIKKQVASLYLWPRILEIPIL 249 Score = 39.3 bits (90), Expect(2) = 6e-30 Identities = 15/28 (53%), Positives = 22/28 (78%) Frame = +2 Query: 5 EPVFKWAGNPDITLVLKILSLRIVVWLI 88 EP +WAGNP+I +V+ ILSLRI + ++ Sbjct: 143 EPAIRWAGNPNIVIVVHILSLRITIQIV 170