BLASTX nr result

ID: Coptis24_contig00039957 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00039957
         (324 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003555438.1| PREDICTED: tricalbin-1-like [Glycine max]         123   9e-31
ref|XP_002272997.1| PREDICTED: extended synaptotagmin-2 [Vitis v...   119   1e-30
ref|XP_002311084.1| predicted protein [Populus trichocarpa] gi|2...   116   2e-30
ref|XP_002873140.1| plant synaptotagmin [Arabidopsis lyrata subs...   110   4e-30
ref|XP_004157531.1| PREDICTED: synaptotagmin-3-like [Cucumis sat...   116   6e-30

>ref|XP_003555438.1| PREDICTED: tricalbin-1-like [Glycine max]
          Length = 545

 Score =  123 bits (309), Expect(2) = 9e-31
 Identities = 57/81 (70%), Positives = 68/81 (83%)
 Frame = +1

Query: 79  LVDLQIFATPRITWTPLVPTFPCFANVVISLMEKPHIDFGMKVLGGDVMAIPGLYRFVQE 258
           LVDLQIFA PR+T  PLVPTFPCFAN+V+SLMEKPH+DFGM VLGGD+M+IPGLYRFVQE
Sbjct: 169 LVDLQIFAAPRVTLRPLVPTFPCFANIVVSLMEKPHVDFGMNVLGGDIMSIPGLYRFVQE 228

Query: 259 TIKKKLRDSTSGPKYWKYPFL 321
           TIKK++ +    P+  + P L
Sbjct: 229 TIKKQVANLYLWPQTLEIPIL 249



 Score = 35.0 bits (79), Expect(2) = 9e-31
 Identities = 15/28 (53%), Positives = 20/28 (71%)
 Frame = +2

Query: 5   EPVFKWAGNPDITLVLKILSLRIVVWLI 88
           E V KWAGNP+I L + + SL+I V L+
Sbjct: 143 EQVIKWAGNPEIVLSVYVASLKITVQLV 170


>ref|XP_002272997.1| PREDICTED: extended synaptotagmin-2 [Vitis vinifera]
           gi|296086005|emb|CBI31446.3| unnamed protein product
           [Vitis vinifera]
          Length = 544

 Score =  119 bits (298), Expect(2) = 1e-30
 Identities = 55/81 (67%), Positives = 68/81 (83%)
 Frame = +1

Query: 79  LVDLQIFATPRITWTPLVPTFPCFANVVISLMEKPHIDFGMKVLGGDVMAIPGLYRFVQE 258
           LVDLQIFA PRIT  PLVPTFPCFA++V+SLMEKPH+DFG+K+LGGD+M+IPGLYRFVQE
Sbjct: 169 LVDLQIFAAPRITLKPLVPTFPCFASLVLSLMEKPHVDFGLKILGGDIMSIPGLYRFVQE 228

Query: 259 TIKKKLRDSTSGPKYWKYPFL 321
           TIK+++      P+  + P L
Sbjct: 229 TIKREVAKLYLWPQTLEIPIL 249



 Score = 38.9 bits (89), Expect(2) = 1e-30
 Identities = 17/28 (60%), Positives = 20/28 (71%)
 Frame = +2

Query: 5   EPVFKWAGNPDITLVLKILSLRIVVWLI 88
           EP  KWAGNP+I LVLK L  RI + L+
Sbjct: 143 EPAIKWAGNPNIILVLKWLPFRITIQLV 170


>ref|XP_002311084.1| predicted protein [Populus trichocarpa] gi|222850904|gb|EEE88451.1|
           predicted protein [Populus trichocarpa]
          Length = 547

 Score =  116 bits (291), Expect(2) = 2e-30
 Identities = 53/81 (65%), Positives = 65/81 (80%)
 Frame = +1

Query: 79  LVDLQIFATPRITWTPLVPTFPCFANVVISLMEKPHIDFGMKVLGGDVMAIPGLYRFVQE 258
           LVDLQIFA PR+   PLVPTFPCFAN+++SLME+PH+DFG+K+LGGDVM+IPGLYRFVQE
Sbjct: 170 LVDLQIFAAPRVALKPLVPTFPCFANILVSLMERPHVDFGLKILGGDVMSIPGLYRFVQE 229

Query: 259 TIKKKLRDSTSGPKYWKYPFL 321
            IKK++      P+    P L
Sbjct: 230 MIKKQVASLYLWPQTLDIPIL 250



 Score = 41.2 bits (95), Expect(2) = 2e-30
 Identities = 16/28 (57%), Positives = 23/28 (82%)
 Frame = +2

Query: 5   EPVFKWAGNPDITLVLKILSLRIVVWLI 88
           EP  +WAGNP+I LVLK++SL++ V L+
Sbjct: 144 EPAIRWAGNPNIVLVLKLMSLQVTVQLV 171


>ref|XP_002873140.1| plant synaptotagmin [Arabidopsis lyrata subsp. lyrata]
           gi|297318977|gb|EFH49399.1| plant synaptotagmin
           [Arabidopsis lyrata subsp. lyrata]
          Length = 549

 Score =  110 bits (275), Expect(2) = 4e-30
 Identities = 51/81 (62%), Positives = 63/81 (77%)
 Frame = +1

Query: 79  LVDLQIFATPRITWTPLVPTFPCFANVVISLMEKPHIDFGMKVLGGDVMAIPGLYRFVQE 258
           LVDLQ FA  R+   PL+PTFPCF  VV+SLMEKPH+DFG+KVLGGDVM+IPGLYR+VQE
Sbjct: 169 LVDLQFFAIVRVALKPLLPTFPCFGMVVVSLMEKPHVDFGLKVLGGDVMSIPGLYRYVQE 228

Query: 259 TIKKKLRDSTSGPKYWKYPFL 321
           TIK+++      P+  + P L
Sbjct: 229 TIKRQVSSMYHWPQVLEIPIL 249



 Score = 45.8 bits (107), Expect(2) = 4e-30
 Identities = 21/29 (72%), Positives = 24/29 (82%)
 Frame = +2

Query: 2   FEPVFKWAGNPDITLVLKILSLRIVVWLI 88
           FEP  KWAGNP+I LVLK+LSLRI V L+
Sbjct: 142 FEPSIKWAGNPNIVLVLKVLSLRIRVQLV 170


>ref|XP_004157531.1| PREDICTED: synaptotagmin-3-like [Cucumis sativus]
          Length = 539

 Score =  116 bits (291), Expect(2) = 6e-30
 Identities = 51/81 (62%), Positives = 66/81 (81%)
 Frame = +1

Query: 79  LVDLQIFATPRITWTPLVPTFPCFANVVISLMEKPHIDFGMKVLGGDVMAIPGLYRFVQE 258
           +VDLQ+FATPR+   PLVPTFPCFAN++ SLMEKP IDFG+K++GGD+M+IPGLYRF+QE
Sbjct: 169 IVDLQLFATPRLALKPLVPTFPCFANIIASLMEKPQIDFGLKIMGGDIMSIPGLYRFIQE 228

Query: 259 TIKKKLRDSTSGPKYWKYPFL 321
           TIKK++      P+  + P L
Sbjct: 229 TIKKQVASLYLWPRILEIPIL 249



 Score = 39.3 bits (90), Expect(2) = 6e-30
 Identities = 15/28 (53%), Positives = 22/28 (78%)
 Frame = +2

Query: 5   EPVFKWAGNPDITLVLKILSLRIVVWLI 88
           EP  +WAGNP+I +V+ ILSLRI + ++
Sbjct: 143 EPAIRWAGNPNIVIVVHILSLRITIQIV 170


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