BLASTX nr result
ID: Coptis24_contig00039950
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00039950 (310 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI27088.3| unnamed protein product [Vitis vinifera] 103 1e-20 emb|CAN62390.1| hypothetical protein VITISV_039480 [Vitis vinifera] 103 1e-20 ref|XP_003631190.1| PREDICTED: LOW QUALITY PROTEIN: ABC transpor... 102 4e-20 ref|XP_002524381.1| ATP-binding cassette transporter, putative [... 101 7e-20 ref|XP_002314895.1| white-brown-complex ABC transporter family [... 98 8e-19 >emb|CBI27088.3| unnamed protein product [Vitis vinifera] Length = 676 Score = 103 bits (258), Expect = 1e-20 Identities = 51/97 (52%), Positives = 67/97 (69%) Frame = -1 Query: 295 DKQNSMKQSLISSYKKNMHGVLKAELHQNDRDXXXXXXXXXXXXXXXXXXXXXXXXQFKV 116 D QNS+KQ+LISSYKK+++ +++AE+H+N QFKV Sbjct: 357 DDQNSIKQALISSYKKSLYHIMRAEIHRNSHGSDGSASGPLSSRGCENQWTSSWWEQFKV 416 Query: 115 LVKRGLKERKHESYSGLRVFQIMSVSILSGLLWWRSN 5 L++RGL+ERKHESYSGLR+FQ+MSVSILSGLLWW S+ Sbjct: 417 LLRRGLQERKHESYSGLRIFQVMSVSILSGLLWWHSD 453 >emb|CAN62390.1| hypothetical protein VITISV_039480 [Vitis vinifera] Length = 696 Score = 103 bits (258), Expect = 1e-20 Identities = 51/97 (52%), Positives = 67/97 (69%) Frame = -1 Query: 295 DKQNSMKQSLISSYKKNMHGVLKAELHQNDRDXXXXXXXXXXXXXXXXXXXXXXXXQFKV 116 D QNS+KQ+LISSYKK+++ +++AE+H+N QFKV Sbjct: 377 DDQNSIKQALISSYKKSLYHIMRAEIHRNSHGSDGSASGPLSSRGCENQWTSSWWEQFKV 436 Query: 115 LVKRGLKERKHESYSGLRVFQIMSVSILSGLLWWRSN 5 L++RGL+ERKHESYSGLR+FQ+MSVSILSGLLWW S+ Sbjct: 437 LLRRGLQERKHESYSGLRIFQVMSVSILSGLLWWHSD 473 >ref|XP_003631190.1| PREDICTED: LOW QUALITY PROTEIN: ABC transporter G family member 21-like [Vitis vinifera] Length = 677 Score = 102 bits (253), Expect = 4e-20 Identities = 53/98 (54%), Positives = 69/98 (70%), Gaps = 1/98 (1%) Frame = -1 Query: 295 DKQNSMKQSLISSYKKNMHGVLKAELHQNDR-DXXXXXXXXXXXXXXXXXXXXXXXXQFK 119 D QNS+KQ+LISSYKK+++ +++AE+H+N D QFK Sbjct: 357 DDQNSIKQALISSYKKSLYHIMRAEIHRNSHADSXKFVLISKGVAGCENQWTSSWWEQFK 416 Query: 118 VLVKRGLKERKHESYSGLRVFQIMSVSILSGLLWWRSN 5 VL++RGL+ERKHESYSGLR+FQ+MSVSILSGLLWW S+ Sbjct: 417 VLLRRGLQERKHESYSGLRIFQVMSVSILSGLLWWHSD 454 >ref|XP_002524381.1| ATP-binding cassette transporter, putative [Ricinus communis] gi|223536342|gb|EEF37992.1| ATP-binding cassette transporter, putative [Ricinus communis] Length = 709 Score = 101 bits (251), Expect = 7e-20 Identities = 54/98 (55%), Positives = 67/98 (68%), Gaps = 1/98 (1%) Frame = -1 Query: 295 DKQNSMKQSLISSYKKNMHGVLKAELHQNDRDXXXXXXXXXXXXXXXXXXXXXXXXQ-FK 119 D Q+S+KQSLISSYKKN++ LKAE+ +N +D Q FK Sbjct: 389 DDQSSIKQSLISSYKKNLYPALKAEIRRNSQDPVLPSSTGTSSLRNSENQWATTWWQQFK 448 Query: 118 VLVKRGLKERKHESYSGLRVFQIMSVSILSGLLWWRSN 5 VL++RGL+ERKHESYSGLR+FQ+MSVSILSGLLWW S+ Sbjct: 449 VLLRRGLQERKHESYSGLRIFQVMSVSILSGLLWWHSD 486 >ref|XP_002314895.1| white-brown-complex ABC transporter family [Populus trichocarpa] gi|222863935|gb|EEF01066.1| white-brown-complex ABC transporter family [Populus trichocarpa] Length = 683 Score = 97.8 bits (242), Expect = 8e-19 Identities = 51/97 (52%), Positives = 65/97 (67%) Frame = -1 Query: 295 DKQNSMKQSLISSYKKNMHGVLKAELHQNDRDXXXXXXXXXXXXXXXXXXXXXXXXQFKV 116 D QNS KQSLISSYK N++ +L +E+H+N +D FKV Sbjct: 367 DDQNSAKQSLISSYKNNLYPLLISEIHRNAQDPVLPSSSLRGSEVQWTTSCWQQ---FKV 423 Query: 115 LVKRGLKERKHESYSGLRVFQIMSVSILSGLLWWRSN 5 L++RGL+ERKHESYSGLR+FQ++SVSILSGLLWW S+ Sbjct: 424 LLRRGLQERKHESYSGLRIFQVISVSILSGLLWWHSD 460