BLASTX nr result

ID: Coptis24_contig00039950 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00039950
         (310 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27088.3| unnamed protein product [Vitis vinifera]              103   1e-20
emb|CAN62390.1| hypothetical protein VITISV_039480 [Vitis vinifera]   103   1e-20
ref|XP_003631190.1| PREDICTED: LOW QUALITY PROTEIN: ABC transpor...   102   4e-20
ref|XP_002524381.1| ATP-binding cassette transporter, putative [...   101   7e-20
ref|XP_002314895.1| white-brown-complex ABC transporter family [...    98   8e-19

>emb|CBI27088.3| unnamed protein product [Vitis vinifera]
          Length = 676

 Score =  103 bits (258), Expect = 1e-20
 Identities = 51/97 (52%), Positives = 67/97 (69%)
 Frame = -1

Query: 295 DKQNSMKQSLISSYKKNMHGVLKAELHQNDRDXXXXXXXXXXXXXXXXXXXXXXXXQFKV 116
           D QNS+KQ+LISSYKK+++ +++AE+H+N                           QFKV
Sbjct: 357 DDQNSIKQALISSYKKSLYHIMRAEIHRNSHGSDGSASGPLSSRGCENQWTSSWWEQFKV 416

Query: 115 LVKRGLKERKHESYSGLRVFQIMSVSILSGLLWWRSN 5
           L++RGL+ERKHESYSGLR+FQ+MSVSILSGLLWW S+
Sbjct: 417 LLRRGLQERKHESYSGLRIFQVMSVSILSGLLWWHSD 453


>emb|CAN62390.1| hypothetical protein VITISV_039480 [Vitis vinifera]
          Length = 696

 Score =  103 bits (258), Expect = 1e-20
 Identities = 51/97 (52%), Positives = 67/97 (69%)
 Frame = -1

Query: 295 DKQNSMKQSLISSYKKNMHGVLKAELHQNDRDXXXXXXXXXXXXXXXXXXXXXXXXQFKV 116
           D QNS+KQ+LISSYKK+++ +++AE+H+N                           QFKV
Sbjct: 377 DDQNSIKQALISSYKKSLYHIMRAEIHRNSHGSDGSASGPLSSRGCENQWTSSWWEQFKV 436

Query: 115 LVKRGLKERKHESYSGLRVFQIMSVSILSGLLWWRSN 5
           L++RGL+ERKHESYSGLR+FQ+MSVSILSGLLWW S+
Sbjct: 437 LLRRGLQERKHESYSGLRIFQVMSVSILSGLLWWHSD 473


>ref|XP_003631190.1| PREDICTED: LOW QUALITY PROTEIN: ABC transporter G family member
           21-like [Vitis vinifera]
          Length = 677

 Score =  102 bits (253), Expect = 4e-20
 Identities = 53/98 (54%), Positives = 69/98 (70%), Gaps = 1/98 (1%)
 Frame = -1

Query: 295 DKQNSMKQSLISSYKKNMHGVLKAELHQNDR-DXXXXXXXXXXXXXXXXXXXXXXXXQFK 119
           D QNS+KQ+LISSYKK+++ +++AE+H+N   D                        QFK
Sbjct: 357 DDQNSIKQALISSYKKSLYHIMRAEIHRNSHADSXKFVLISKGVAGCENQWTSSWWEQFK 416

Query: 118 VLVKRGLKERKHESYSGLRVFQIMSVSILSGLLWWRSN 5
           VL++RGL+ERKHESYSGLR+FQ+MSVSILSGLLWW S+
Sbjct: 417 VLLRRGLQERKHESYSGLRIFQVMSVSILSGLLWWHSD 454


>ref|XP_002524381.1| ATP-binding cassette transporter, putative [Ricinus communis]
           gi|223536342|gb|EEF37992.1| ATP-binding cassette
           transporter, putative [Ricinus communis]
          Length = 709

 Score =  101 bits (251), Expect = 7e-20
 Identities = 54/98 (55%), Positives = 67/98 (68%), Gaps = 1/98 (1%)
 Frame = -1

Query: 295 DKQNSMKQSLISSYKKNMHGVLKAELHQNDRDXXXXXXXXXXXXXXXXXXXXXXXXQ-FK 119
           D Q+S+KQSLISSYKKN++  LKAE+ +N +D                        Q FK
Sbjct: 389 DDQSSIKQSLISSYKKNLYPALKAEIRRNSQDPVLPSSTGTSSLRNSENQWATTWWQQFK 448

Query: 118 VLVKRGLKERKHESYSGLRVFQIMSVSILSGLLWWRSN 5
           VL++RGL+ERKHESYSGLR+FQ+MSVSILSGLLWW S+
Sbjct: 449 VLLRRGLQERKHESYSGLRIFQVMSVSILSGLLWWHSD 486


>ref|XP_002314895.1| white-brown-complex ABC transporter family [Populus trichocarpa]
           gi|222863935|gb|EEF01066.1| white-brown-complex ABC
           transporter family [Populus trichocarpa]
          Length = 683

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 51/97 (52%), Positives = 65/97 (67%)
 Frame = -1

Query: 295 DKQNSMKQSLISSYKKNMHGVLKAELHQNDRDXXXXXXXXXXXXXXXXXXXXXXXXQFKV 116
           D QNS KQSLISSYK N++ +L +E+H+N +D                         FKV
Sbjct: 367 DDQNSAKQSLISSYKNNLYPLLISEIHRNAQDPVLPSSSLRGSEVQWTTSCWQQ---FKV 423

Query: 115 LVKRGLKERKHESYSGLRVFQIMSVSILSGLLWWRSN 5
           L++RGL+ERKHESYSGLR+FQ++SVSILSGLLWW S+
Sbjct: 424 LLRRGLQERKHESYSGLRIFQVISVSILSGLLWWHSD 460


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