BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00039859
         (269 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003546476.1| PREDICTED: replication protein A 70 kDa DNA-...   169   3e-40
ref|XP_002330505.1| predicted protein [Populus trichocarpa] gi|2...   166   2e-39
ref|XP_002278273.1| PREDICTED: replication protein A 70 kDa DNA-...   166   2e-39
ref|NP_973433.1| replication factor A1 [Arabidopsis thaliana] gi...   163   1e-38
ref|NP_178690.1| replication factor A1 [Arabidopsis thaliana] gi...   163   1e-38

>ref|XP_003546476.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
           [Glycine max]
          Length = 637

 Score =  169 bits (427), Expect = 3e-40
 Identities = 79/87 (90%), Positives = 87/87 (100%)
 Frame = -3

Query: 267 AIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNSLVDKFYDVVEVGKVYM 88
           AIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFN++VD+FY+V+EVGKVYM
Sbjct: 205 AIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYNVIEVGKVYM 264

Query: 87  VSKGSLKPAQKNFNHLKNEWEILLETA 7
           +SKGSLKPAQKNFNHLKNEWEILLE++
Sbjct: 265 ISKGSLKPAQKNFNHLKNEWEILLESS 291


>ref|XP_002330505.1| predicted protein [Populus trichocarpa] gi|222872439|gb|EEF09570.1|
           predicted protein [Populus trichocarpa]
          Length = 502

 Score =  166 bits (420), Expect = 2e-39
 Identities = 77/85 (90%), Positives = 84/85 (98%)
 Frame = -3

Query: 267 AIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNSLVDKFYDVVEVGKVYM 88
           AIKAR+TAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFN++VD+FYDVVEVGKVY+
Sbjct: 130 AIKARITAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYDVVEVGKVYL 189

Query: 87  VSKGSLKPAQKNFNHLKNEWEILLE 13
           +SKGSLKPAQKNFNHLKN+WEI LE
Sbjct: 190 ISKGSLKPAQKNFNHLKNDWEIFLE 214


>ref|XP_002278273.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit [Vitis
           vinifera] gi|297738589|emb|CBI27834.3| unnamed protein
           product [Vitis vinifera]
          Length = 622

 Score =  166 bits (420), Expect = 2e-39
 Identities = 77/87 (88%), Positives = 84/87 (96%)
 Frame = -3

Query: 267 AIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNSLVDKFYDVVEVGKVYM 88
           AIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFN++VD+FYD +EVGKVY+
Sbjct: 192 AIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYDTIEVGKVYL 251

Query: 87  VSKGSLKPAQKNFNHLKNEWEILLETA 7
           +SKGSLKPAQKNFNHLKNEWEI LE +
Sbjct: 252 ISKGSLKPAQKNFNHLKNEWEIFLEAS 278


>ref|NP_973433.1| replication factor A1 [Arabidopsis thaliana]
           gi|330250915|gb|AEC06009.1| replication factor A1
           [Arabidopsis thaliana]
          Length = 617

 Score =  163 bits (413), Expect = 1e-38
 Identities = 76/86 (88%), Positives = 83/86 (96%)
 Frame = -3

Query: 267 AIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNSLVDKFYDVVEVGKVYM 88
           AIKARVTAKGD+RRYNNA+GDGKVFSFDLLD DGGEIRVTCFN+LVD+FYDV EVGKVY+
Sbjct: 188 AIKARVTAKGDIRRYNNAKGDGKVFSFDLLDYDGGEIRVTCFNALVDRFYDVTEVGKVYL 247

Query: 87  VSKGSLKPAQKNFNHLKNEWEILLET 10
           +SKGSLKPAQKNFNHLKNEWEI LE+
Sbjct: 248 ISKGSLKPAQKNFNHLKNEWEIFLES 273


>ref|NP_178690.1| replication factor A1 [Arabidopsis thaliana]
           gi|4584356|gb|AAD25150.1| putative replication protein
           A1 [Arabidopsis thaliana] gi|26452416|dbj|BAC43293.1|
           putative replication protein A1 [Arabidopsis thaliana]
           gi|29029004|gb|AAO64881.1| At2g06510 [Arabidopsis
           thaliana] gi|330250916|gb|AEC06010.1| replication factor
           A1 [Arabidopsis thaliana]
          Length = 640

 Score =  163 bits (413), Expect = 1e-38
 Identities = 76/86 (88%), Positives = 83/86 (96%)
 Frame = -3

Query: 267 AIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNSLVDKFYDVVEVGKVYM 88
           AIKARVTAKGD+RRYNNA+GDGKVFSFDLLD DGGEIRVTCFN+LVD+FYDV EVGKVY+
Sbjct: 211 AIKARVTAKGDIRRYNNAKGDGKVFSFDLLDYDGGEIRVTCFNALVDRFYDVTEVGKVYL 270

Query: 87  VSKGSLKPAQKNFNHLKNEWEILLET 10
           +SKGSLKPAQKNFNHLKNEWEI LE+
Sbjct: 271 ISKGSLKPAQKNFNHLKNEWEIFLES 296