BLASTX nr result

ID: Coptis24_contig00039744 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00039744
         (359 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265776.1| PREDICTED: fanconi-associated nuclease 1 hom...   146   1e-33
emb|CBI39437.3| unnamed protein product [Vitis vinifera]              145   3e-33
ref|XP_002302897.1| predicted protein [Populus trichocarpa] gi|2...   145   3e-33
ref|XP_004141651.1| PREDICTED: fanconi-associated nuclease 1 hom...   144   7e-33
emb|CAN81871.1| hypothetical protein VITISV_038069 [Vitis vinifera]   137   7e-31

>ref|XP_002265776.1| PREDICTED: fanconi-associated nuclease 1 homolog [Vitis vinifera]
          Length = 955

 Score =  146 bits (369), Expect = 1e-33
 Identities = 76/118 (64%), Positives = 89/118 (75%)
 Frame = +2

Query: 5   VSEIREILRQTCFKKDIYSKRRPELIASLYASYEDGMCSSLPSLILNRAGICVRISSTAE 184
           VSE+REI      K   +  R+ +LIASL +SYEDG+C  L   ILN+ G CVRIS  AE
Sbjct: 452 VSELREI-SSAVMKHCHHGTRKQDLIASLLSSYEDGLCPLLQRAILNKTGTCVRISCKAE 510

Query: 185 FLLWRVQRLFFLNGDQDLSAFLLVDLGLVKYPIYNCIVSNHIFPVRSDLLAYEEAIEV 358
            L+WR  RLFFLNG+QDLSAFLLVDLG+VKYP YNCI+S+ IFP  +DLLAYEEAIEV
Sbjct: 511 SLVWRALRLFFLNGEQDLSAFLLVDLGIVKYPTYNCIISDQIFPGLNDLLAYEEAIEV 568


>emb|CBI39437.3| unnamed protein product [Vitis vinifera]
          Length = 951

 Score =  145 bits (367), Expect = 3e-33
 Identities = 75/118 (63%), Positives = 90/118 (76%)
 Frame = +2

Query: 5   VSEIREILRQTCFKKDIYSKRRPELIASLYASYEDGMCSSLPSLILNRAGICVRISSTAE 184
           VSE+REI   +  +   +  R+ +LIASL +SYEDG+C  L   ILN+ G CVRIS  AE
Sbjct: 449 VSELREI--SSALQHCHHGTRKQDLIASLLSSYEDGLCPLLQRAILNKTGTCVRISCKAE 506

Query: 185 FLLWRVQRLFFLNGDQDLSAFLLVDLGLVKYPIYNCIVSNHIFPVRSDLLAYEEAIEV 358
            L+WR  RLFFLNG+QDLSAFLLVDLG+VKYP YNCI+S+ IFP  +DLLAYEEAIEV
Sbjct: 507 SLVWRALRLFFLNGEQDLSAFLLVDLGIVKYPTYNCIISDQIFPGLNDLLAYEEAIEV 564


>ref|XP_002302897.1| predicted protein [Populus trichocarpa] gi|222844623|gb|EEE82170.1|
           predicted protein [Populus trichocarpa]
          Length = 1028

 Score =  145 bits (367), Expect = 3e-33
 Identities = 67/98 (68%), Positives = 84/98 (85%)
 Frame = +2

Query: 65  RRPELIASLYASYEDGMCSSLPSLILNRAGICVRISSTAEFLLWRVQRLFFLNGDQDLSA 244
           R+ +LIAS+++SYEDG+C  LP  IL+R GIC++ISS AE L+WR +RLFFLNG+QDLSA
Sbjct: 544 RKQDLIASVFSSYEDGVCPFLPIAILDRTGICIKISSKAESLIWRTERLFFLNGEQDLSA 603

Query: 245 FLLVDLGLVKYPIYNCIVSNHIFPVRSDLLAYEEAIEV 358
           FLLVDLG++KYP Y+CI+S  IF  RSDL+AYEEAIEV
Sbjct: 604 FLLVDLGIIKYPAYHCIISEQIFSARSDLIAYEEAIEV 641


>ref|XP_004141651.1| PREDICTED: fanconi-associated nuclease 1 homolog [Cucumis sativus]
           gi|449506836|ref|XP_004162862.1| PREDICTED:
           fanconi-associated nuclease 1 homolog [Cucumis sativus]
          Length = 949

 Score =  144 bits (363), Expect = 7e-33
 Identities = 74/119 (62%), Positives = 95/119 (79%), Gaps = 1/119 (0%)
 Frame = +2

Query: 5   VSEIREILRQTCFKKDIYS-KRRPELIASLYASYEDGMCSSLPSLILNRAGICVRISSTA 181
           VSE+REI+     KK+  S  R+ +L+ASL ++YEDG+C  LP LIL  AGIC RI+S A
Sbjct: 441 VSELREIMH--LLKKNCNSVMRKDDLVASLLSAYEDGLCPLLPDLILRIAGICARITSKA 498

Query: 182 EFLLWRVQRLFFLNGDQDLSAFLLVDLGLVKYPIYNCIVSNHIFPVRSDLLAYEEAIEV 358
           E L+WR +RLFFLNG+Q+LS+FLLVD+G+VKYP Y+CIVS+ IF  R+DLLAYEEA+EV
Sbjct: 499 ELLIWRAERLFFLNGEQNLSSFLLVDMGVVKYPTYSCIVSDQIFLDRNDLLAYEEAMEV 557


>emb|CAN81871.1| hypothetical protein VITISV_038069 [Vitis vinifera]
          Length = 231

 Score =  137 bits (346), Expect = 7e-31
 Identities = 69/107 (64%), Positives = 81/107 (75%), Gaps = 3/107 (2%)
 Frame = +2

Query: 35  TCFKKDIYSK---RRPELIASLYASYEDGMCSSLPSLILNRAGICVRISSTAEFLLWRVQ 205
           TCFK   Y+     + +LIASL +SYEDG+C  L   ILN+ G CVRIS  AE L+WR  
Sbjct: 103 TCFKLQRYASLVVSKQDLIASLLSSYEDGLCPLLQRAILNKTGTCVRISCKAESLVWRAL 162

Query: 206 RLFFLNGDQDLSAFLLVDLGLVKYPIYNCIVSNHIFPVRSDLLAYEE 346
           RLFFLNG+QDLSAFLLVDLG+VKYP YNCI+S+ IFP  +DLLAYEE
Sbjct: 163 RLFFLNGEQDLSAFLLVDLGIVKYPTYNCIISDQIFPGLNDLLAYEE 209


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