BLASTX nr result

ID: Coptis24_contig00039707 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00039707
         (264 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514639.1| conserved hypothetical protein [Ricinus comm...    65   8e-09
ref|XP_002527634.1| conserved hypothetical protein [Ricinus comm...    65   8e-09
ref|XP_002306055.1| predicted protein [Populus trichocarpa] gi|2...    64   1e-08
ref|XP_004157484.1| PREDICTED: uncharacterized LOC101203219 [Cuc...    60   1e-07
ref|XP_004155045.1| PREDICTED: uncharacterized protein LOC101224...    60   1e-07

>ref|XP_002514639.1| conserved hypothetical protein [Ricinus communis]
           gi|223546243|gb|EEF47745.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 576

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 34/67 (50%), Positives = 43/67 (64%), Gaps = 6/67 (8%)
 Frame = -3

Query: 187 DVNGLLL------HIGNKFDLPSDCIADKFIYGKAILKRSSCVDFLKFCFQRFNVGVWSS 26
           DVNGLL+      HI NK D+         I  K++ KR  C DFL+FCF++FNVGVWSS
Sbjct: 353 DVNGLLVDILPYGHISNKADIT--------ISHKSVFKRPFCDDFLQFCFKKFNVGVWSS 404

Query: 25  RIKRNLD 5
           R K+N+D
Sbjct: 405 RTKKNMD 411


>ref|XP_002527634.1| conserved hypothetical protein [Ricinus communis]
           gi|223533008|gb|EEF34773.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 340

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 35/61 (57%), Positives = 41/61 (67%)
 Frame = -3

Query: 187 DVNGLLLHIGNKFDLPSDCIADKFIYGKAILKRSSCVDFLKFCFQRFNVGVWSSRIKRNL 8
           D+NGLL+ I +    P    AD  I  KAI  R  C+DFLKFCF+RF VGVWSSRIK+N 
Sbjct: 113 DLNGLLVDIVSC--PPKGYKADVKIRRKAIFMRPFCLDFLKFCFERFEVGVWSSRIKKNF 170

Query: 7   D 5
           D
Sbjct: 171 D 171


>ref|XP_002306055.1| predicted protein [Populus trichocarpa] gi|222849019|gb|EEE86566.1|
           predicted protein [Populus trichocarpa]
          Length = 209

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 32/61 (52%), Positives = 42/61 (68%)
 Frame = -3

Query: 187 DVNGLLLHIGNKFDLPSDCIADKFIYGKAILKRSSCVDFLKFCFQRFNVGVWSSRIKRNL 8
           D+NG+L+ I +    P   IAD  I  KA+ +R  C DFLKFCF+RF VGVWSSR ++N+
Sbjct: 8   DINGVLVDIVSA--PPKGHIADIKIAKKAVFRRPFCFDFLKFCFERFEVGVWSSRTRKNV 65

Query: 7   D 5
           D
Sbjct: 66  D 66


>ref|XP_004157484.1| PREDICTED: uncharacterized LOC101203219 [Cucumis sativus]
          Length = 540

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 32/61 (52%), Positives = 38/61 (62%)
 Frame = -3

Query: 187 DVNGLLLHIGNKFDLPSDCIADKFIYGKAILKRSSCVDFLKFCFQRFNVGVWSSRIKRNL 8
           DVNGLL        +P     D  I  KA+ KR  C DF+KFCF+RF VGVWSSR +RN+
Sbjct: 323 DVNGLLADF--ICYVPPGYKPDIIIRQKAVFKRPFCDDFIKFCFERFEVGVWSSRTRRNV 380

Query: 7   D 5
           D
Sbjct: 381 D 381


>ref|XP_004155045.1| PREDICTED: uncharacterized protein LOC101224607 [Cucumis sativus]
          Length = 531

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 32/61 (52%), Positives = 38/61 (62%)
 Frame = -3

Query: 187 DVNGLLLHIGNKFDLPSDCIADKFIYGKAILKRSSCVDFLKFCFQRFNVGVWSSRIKRNL 8
           DVNGLL+     F  P     D  I  KA+ KR  C DFL+FCF+RF VG+WSSR  RNL
Sbjct: 382 DVNGLLVDFVPYF--PDGYTPDFVISRKAVFKRPFCDDFLQFCFERFEVGIWSSRTWRNL 439

Query: 7   D 5
           +
Sbjct: 440 N 440


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