BLASTX nr result

ID: Coptis24_contig00039685 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00039685
         (250 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002311149.1| predicted protein [Populus trichocarpa] gi|2...    71   8e-11
ref|XP_002531984.1| conserved hypothetical protein [Ricinus comm...    70   2e-10
ref|XP_002881659.1| hypothetical protein ARALYDRAFT_903200 [Arab...    69   5e-10
ref|XP_002879803.1| hypothetical protein ARALYDRAFT_903202 [Arab...    69   5e-10
ref|NP_565907.1| uncharacterized protein [Arabidopsis thaliana] ...    68   9e-10

>ref|XP_002311149.1| predicted protein [Populus trichocarpa] gi|222850969|gb|EEE88516.1|
           predicted protein [Populus trichocarpa]
          Length = 59

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 33/45 (73%), Positives = 37/45 (82%)
 Frame = +2

Query: 74  WCASFLIAWAAVLQGHMMWLKRQDSFKNKFGTLEEEDEINDDLSQ 208
           W ASFLIAWAA LQGHMMWL+RQDSFK KFGTL E+   N D++Q
Sbjct: 17  WFASFLIAWAAALQGHMMWLRRQDSFKQKFGTLNED---NSDVAQ 58


>ref|XP_002531984.1| conserved hypothetical protein [Ricinus communis]
           gi|223528381|gb|EEF30420.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 91

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 30/38 (78%), Positives = 32/38 (84%)
 Frame = +2

Query: 71  FWCASFLIAWAAVLQGHMMWLKRQDSFKNKFGTLEEED 184
           FW ASFLI WAA LQGHMMWL+RQDSFK KFGTL + D
Sbjct: 12  FWFASFLIGWAAALQGHMMWLQRQDSFKQKFGTLNQND 49


>ref|XP_002881659.1| hypothetical protein ARALYDRAFT_903200 [Arabidopsis lyrata subsp.
           lyrata] gi|297327498|gb|EFH57918.1| hypothetical protein
           ARALYDRAFT_903200 [Arabidopsis lyrata subsp. lyrata]
          Length = 53

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 28/38 (73%), Positives = 34/38 (89%)
 Frame = +2

Query: 71  FWCASFLIAWAAVLQGHMMWLKRQDSFKNKFGTLEEED 184
           FW ASFLI WAA LQGHMMWL++Q+SFK KFGT++E+D
Sbjct: 14  FWVASFLIVWAAGLQGHMMWLQKQESFKQKFGTIDEDD 51


>ref|XP_002879803.1| hypothetical protein ARALYDRAFT_903202 [Arabidopsis lyrata subsp.
           lyrata] gi|297325642|gb|EFH56062.1| hypothetical protein
           ARALYDRAFT_903202 [Arabidopsis lyrata subsp. lyrata]
          Length = 55

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 28/38 (73%), Positives = 34/38 (89%)
 Frame = +2

Query: 71  FWCASFLIAWAAVLQGHMMWLKRQDSFKNKFGTLEEED 184
           FW ASFLI WAA LQGHMMWL++Q+SFK KFGT++E+D
Sbjct: 16  FWVASFLIVWAAGLQGHMMWLQKQESFKQKFGTIDEDD 53


>ref|NP_565907.1| uncharacterized protein [Arabidopsis thaliana]
           gi|3355479|gb|AAC27841.1| expressed protein [Arabidopsis
           thaliana] gi|14335016|gb|AAK59772.1| At2g39500/F12L6.16
           [Arabidopsis thaliana] gi|330254593|gb|AEC09687.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 55

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 27/38 (71%), Positives = 34/38 (89%)
 Frame = +2

Query: 71  FWCASFLIAWAAVLQGHMMWLKRQDSFKNKFGTLEEED 184
           FW ASF+I WAA LQGHMMWL++Q+SFK KFGT++E+D
Sbjct: 16  FWIASFIIVWAAGLQGHMMWLQKQESFKQKFGTIDEDD 53


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