BLASTX nr result

ID: Coptis24_contig00039515 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00039515
         (246 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515971.1| ATP-binding cassette transporter, putative [...   142   2e-32
ref|XP_002515969.1| ATP-binding cassette transporter, putative [...   136   2e-30
ref|XP_004165243.1| PREDICTED: LOW QUALITY PROTEIN: ABC transpor...   135   4e-30
ref|XP_004151184.1| PREDICTED: ABC transporter G family member 3...   135   4e-30
gb|ACU82514.1| pleiotropic drug resistance protein [Cucumis sati...   135   4e-30

>ref|XP_002515971.1| ATP-binding cassette transporter, putative [Ricinus communis]
            gi|223544876|gb|EEF46391.1| ATP-binding cassette
            transporter, putative [Ricinus communis]
          Length = 1462

 Score =  142 bits (359), Expect = 2e-32
 Identities = 68/81 (83%), Positives = 73/81 (90%)
 Frame = -2

Query: 245  KRGGQVIYMGPLGHNSRKIINYFEAIPGVQKIKDKYNPATWMLEVSSIAVEVRLGIDFAQ 66
            KRGGQVIY GPLG NS KI+ YFE+IPG+ KIKDKYNPATWMLEVSSIA EVRLGIDFA+
Sbjct: 1120 KRGGQVIYSGPLGQNSHKIVEYFESIPGIPKIKDKYNPATWMLEVSSIAAEVRLGIDFAE 1179

Query: 65   HYKSSALYLRNKELVKELSAP 3
            HYKSS+LY RNK LVKELSAP
Sbjct: 1180 HYKSSSLYQRNKALVKELSAP 1200


>ref|XP_002515969.1| ATP-binding cassette transporter, putative [Ricinus communis]
            gi|223544874|gb|EEF46389.1| ATP-binding cassette
            transporter, putative [Ricinus communis]
          Length = 1472

 Score =  136 bits (343), Expect = 2e-30
 Identities = 65/81 (80%), Positives = 73/81 (90%)
 Frame = -2

Query: 245  KRGGQVIYMGPLGHNSRKIINYFEAIPGVQKIKDKYNPATWMLEVSSIAVEVRLGIDFAQ 66
            KRGGQVIY+GPLG NS KII YFEAIPGV KIK+KYNPATWMLEVSSIA E++LGIDFA+
Sbjct: 1096 KRGGQVIYLGPLGRNSHKIIEYFEAIPGVPKIKEKYNPATWMLEVSSIAAEIQLGIDFAE 1155

Query: 65   HYKSSALYLRNKELVKELSAP 3
            +YKSS+L+ RNK LVKELS P
Sbjct: 1156 YYKSSSLFERNKALVKELSTP 1176


>ref|XP_004165243.1| PREDICTED: LOW QUALITY PROTEIN: ABC transporter G family member
            36-like [Cucumis sativus]
          Length = 1475

 Score =  135 bits (339), Expect = 4e-30
 Identities = 64/81 (79%), Positives = 72/81 (88%)
 Frame = -2

Query: 245  KRGGQVIYMGPLGHNSRKIINYFEAIPGVQKIKDKYNPATWMLEVSSIAVEVRLGIDFAQ 66
            KRGGQVIY GPLG NS+KII YFE+IPGV KIK+KYNPATWMLEVSS+A EVRLG+DFA+
Sbjct: 1099 KRGGQVIYFGPLGRNSQKIIEYFESIPGVPKIKEKYNPATWMLEVSSVAAEVRLGMDFAE 1158

Query: 65   HYKSSALYLRNKELVKELSAP 3
            HYKSS+L  RNKELV +LS P
Sbjct: 1159 HYKSSSLSKRNKELVTDLSTP 1179


>ref|XP_004151184.1| PREDICTED: ABC transporter G family member 36-like [Cucumis sativus]
          Length = 1475

 Score =  135 bits (339), Expect = 4e-30
 Identities = 64/81 (79%), Positives = 72/81 (88%)
 Frame = -2

Query: 245  KRGGQVIYMGPLGHNSRKIINYFEAIPGVQKIKDKYNPATWMLEVSSIAVEVRLGIDFAQ 66
            KRGGQVIY GPLG NS+KII YFE+IPGV KIK+KYNPATWMLEVSS+A EVRLG+DFA+
Sbjct: 1099 KRGGQVIYFGPLGRNSQKIIEYFESIPGVPKIKEKYNPATWMLEVSSVAAEVRLGMDFAE 1158

Query: 65   HYKSSALYLRNKELVKELSAP 3
            HYKSS+L  RNKELV +LS P
Sbjct: 1159 HYKSSSLSKRNKELVTDLSTP 1179


>gb|ACU82514.1| pleiotropic drug resistance protein [Cucumis sativus]
          Length = 1475

 Score =  135 bits (339), Expect = 4e-30
 Identities = 64/81 (79%), Positives = 72/81 (88%)
 Frame = -2

Query: 245  KRGGQVIYMGPLGHNSRKIINYFEAIPGVQKIKDKYNPATWMLEVSSIAVEVRLGIDFAQ 66
            KRGGQVIY GPLG NS+KII YFE+IPGV KIK+KYNPATWMLEVSS+A EVRLG+DFA+
Sbjct: 1099 KRGGQVIYFGPLGRNSQKIIEYFESIPGVPKIKEKYNPATWMLEVSSVAAEVRLGMDFAE 1158

Query: 65   HYKSSALYLRNKELVKELSAP 3
            HYKSS+L  RNKELV +LS P
Sbjct: 1159 HYKSSSLSKRNKELVTDLSTP 1179


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