BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00039478
         (207 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30318.3| unnamed protein product [Vitis vinifera]              104   8e-21
ref|XP_002276333.1| PREDICTED: pentatricopeptide repeat-containi...   104   8e-21
emb|CAN68552.1| hypothetical protein VITISV_014227 [Vitis vinifera]   104   8e-21
ref|XP_004149219.1| PREDICTED: pentatricopeptide repeat-containi...   101   7e-20
ref|XP_002323422.1| predicted protein [Populus trichocarpa] gi|2...   100   2e-19

>emb|CBI30318.3| unnamed protein product [Vitis vinifera]
          Length = 861

 Score =  104 bits (259), Expect = 8e-21
 Identities = 47/67 (70%), Positives = 57/67 (85%)
 Frame = -3

Query: 202 NEALLLYDSMMNSGIVPDKVAMVTVVYTCAKLGSMHKASVVHDYIVGKKFSLDVVLGTAM 23
           NE+L+L++ M   G+VPDKVAMVTVV+ CAKLG+MHKA ++ DYI  KKF LDV+LGTAM
Sbjct: 241 NESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAM 300

Query: 22  IDMYAKC 2
           IDMYAKC
Sbjct: 301 IDMYAKC 307



 Score =  102 bits (255), Expect = 2e-20
 Identities = 47/67 (70%), Positives = 56/67 (83%)
 Frame = -3

Query: 202 NEALLLYDSMMNSGIVPDKVAMVTVVYTCAKLGSMHKASVVHDYIVGKKFSLDVVLGTAM 23
           NE+L+L+D M   G+VPDKVAMVTVV+ CAKLG+MHKA  + DYI  KKF LDV+LGTAM
Sbjct: 471 NESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAM 530

Query: 22  IDMYAKC 2
           IDM+AKC
Sbjct: 531 IDMHAKC 537


>ref|XP_002276333.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Vitis vinifera]
          Length = 705

 Score =  104 bits (259), Expect = 8e-21
 Identities = 47/67 (70%), Positives = 57/67 (85%)
 Frame = -3

Query: 202 NEALLLYDSMMNSGIVPDKVAMVTVVYTCAKLGSMHKASVVHDYIVGKKFSLDVVLGTAM 23
           NE+L+L++ M   G+VPDKVAMVTVV+ CAKLG+MHKA ++ DYI  KKF LDV+LGTAM
Sbjct: 113 NESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAM 172

Query: 22  IDMYAKC 2
           IDMYAKC
Sbjct: 173 IDMYAKC 179



 Score =  102 bits (255), Expect = 2e-20
 Identities = 47/67 (70%), Positives = 56/67 (83%)
 Frame = -3

Query: 202 NEALLLYDSMMNSGIVPDKVAMVTVVYTCAKLGSMHKASVVHDYIVGKKFSLDVVLGTAM 23
           NE+L+L+D M   G+VPDKVAMVTVV+ CAKLG+MHKA  + DYI  KKF LDV+LGTAM
Sbjct: 315 NESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAM 374

Query: 22  IDMYAKC 2
           IDM+AKC
Sbjct: 375 IDMHAKC 381


>emb|CAN68552.1| hypothetical protein VITISV_014227 [Vitis vinifera]
          Length = 1309

 Score =  104 bits (259), Expect = 8e-21
 Identities = 47/67 (70%), Positives = 57/67 (85%)
 Frame = -3

Query: 202 NEALLLYDSMMNSGIVPDKVAMVTVVYTCAKLGSMHKASVVHDYIVGKKFSLDVVLGTAM 23
           NE+L+L++ M   G+VPDKVAMVTVV+ CAKLG+MHKA ++ DYI  KKF LDV+LGTAM
Sbjct: 243 NESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAM 302

Query: 22  IDMYAKC 2
           IDMYAKC
Sbjct: 303 IDMYAKC 309



 Score =  102 bits (255), Expect = 2e-20
 Identities = 47/67 (70%), Positives = 56/67 (83%)
 Frame = -3

Query: 202  NEALLLYDSMMNSGIVPDKVAMVTVVYTCAKLGSMHKASVVHDYIVGKKFSLDVVLGTAM 23
            NE+L+L+D M   G+VPDKVAMVTVV+ CAKLG+MHKA  + DYI  KKF LDV+LGTAM
Sbjct: 919  NESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAM 978

Query: 22   IDMYAKC 2
            IDM+AKC
Sbjct: 979  IDMHAKC 985


>ref|XP_004149219.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Cucumis sativus]
           gi|449500964|ref|XP_004161240.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g11290-like [Cucumis sativus]
          Length = 624

 Score =  101 bits (251), Expect = 7e-20
 Identities = 47/68 (69%), Positives = 56/68 (82%)
 Frame = -3

Query: 205 PNEALLLYDSMMNSGIVPDKVAMVTVVYTCAKLGSMHKASVVHDYIVGKKFSLDVVLGTA 26
           P E+L+ +D M N GIVPDKVA+VTVVY CAKLG+M+KA  +H YI G  +SLDV+LGTA
Sbjct: 233 PVESLVFFDRMRNQGIVPDKVALVTVVYACAKLGAMNKAKAIHAYINGTGYSLDVILGTA 292

Query: 25  MIDMYAKC 2
           MIDMYAKC
Sbjct: 293 MIDMYAKC 300


>ref|XP_002323422.1| predicted protein [Populus trichocarpa] gi|222868052|gb|EEF05183.1|
           predicted protein [Populus trichocarpa]
          Length = 574

 Score =  100 bits (248), Expect = 2e-19
 Identities = 45/68 (66%), Positives = 56/68 (82%)
 Frame = -3

Query: 205 PNEALLLYDSMMNSGIVPDKVAMVTVVYTCAKLGSMHKASVVHDYIVGKKFSLDVVLGTA 26
           PNE+ +L+D M   G VPDKVAMVT+V  CAKLG+M+KA +VHDY+  +++SLDV LGTA
Sbjct: 183 PNESWVLFDQMRRDGFVPDKVAMVTIVNACAKLGAMNKARLVHDYVCARRYSLDVELGTA 242

Query: 25  MIDMYAKC 2
           MIDMYAKC
Sbjct: 243 MIDMYAKC 250