BLASTX nr result
ID: Coptis24_contig00039430
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00039430
(697 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003635008.1| PREDICTED: DNA replication licensing factor ... 424 e-117
ref|XP_002299379.1| predicted protein [Populus trichocarpa] gi|2... 416 e-114
ref|XP_004134510.1| PREDICTED: DNA replication licensing factor ... 410 e-112
ref|XP_002439489.1| hypothetical protein SORBIDRAFT_09g008010 [S... 410 e-112
gb|AFW77495.1| hypothetical protein ZEAMMB73_948044 [Zea mays] 410 e-112
>ref|XP_003635008.1| PREDICTED: DNA replication licensing factor MCM6 [Vitis vinifera]
Length = 812
Score = 424 bits (1091), Expect = e-117
Identities = 211/232 (90%), Positives = 223/232 (96%)
Frame = +1
Query: 1 LSYRLAFIANSVKISDGRRDSDIRNSKRDGEDDDSQQFTAEELDEIQTMRNTPDFFNKIV 180
LSYRLAFIANSV+ISDGRR++DIRN K+D ++DD+QQF EELDEIQ MRNTPDFFNK+V
Sbjct: 291 LSYRLAFIANSVQISDGRREADIRNRKKDADEDDNQQFMQEELDEIQRMRNTPDFFNKLV 350
Query: 181 DSIAPTVFGHQEIKRAILLMLLGGVHKITHEGINLRGDINVCIVGDPSCAKSQFLKYTTT 360
DSIAPTVFGHQ+IKRAILLMLLGGVHK THEGINLRGDINVCIVGDPSCAKSQFLKYT+
Sbjct: 351 DSIAPTVFGHQDIKRAILLMLLGGVHKCTHEGINLRGDINVCIVGDPSCAKSQFLKYTSG 410
Query: 361 LVARSVYTSGKSSSAAGLTATVAKEQETGEFCIEAGALMLADNGICCIDEFDKMDVRDQV 540
LV RSVYTSGKSSSAAGLTATVAKE ETGEFCIEAGALMLADNG+CCIDEFDKMD+RDQV
Sbjct: 411 LVPRSVYTSGKSSSAAGLTATVAKEPETGEFCIEAGALMLADNGVCCIDEFDKMDIRDQV 470
Query: 541 AIHEAMEQQTISITKAGIQATLNARTSILAAANPTGGRYDKSKPLKYNVALP 696
AIHEAMEQQTISITKAGIQATLNARTSILAAANPTGGRYDKSKPLKYNVALP
Sbjct: 471 AIHEAMEQQTISITKAGIQATLNARTSILAAANPTGGRYDKSKPLKYNVALP 522
>ref|XP_002299379.1| predicted protein [Populus trichocarpa] gi|222846637|gb|EEE84184.1|
predicted protein [Populus trichocarpa]
Length = 842
Score = 416 bits (1070), Expect = e-114
Identities = 207/232 (89%), Positives = 220/232 (94%)
Frame = +1
Query: 1 LSYRLAFIANSVKISDGRRDSDIRNSKRDGEDDDSQQFTAEELDEIQTMRNTPDFFNKIV 180
LSYRLAFIANSV++ DGRRD+DIRN K+ ++DD+Q+FT EELDEIQ MRNTPDFFNKIV
Sbjct: 294 LSYRLAFIANSVQVCDGRRDTDIRNRKKAVDEDDNQEFTTEELDEIQRMRNTPDFFNKIV 353
Query: 181 DSIAPTVFGHQEIKRAILLMLLGGVHKITHEGINLRGDINVCIVGDPSCAKSQFLKYTTT 360
DSIAPTVFGHQ+IKRAILLMLLGGVHK THEGINLRGDINVCIVGDPSCAKSQFLKY +
Sbjct: 354 DSIAPTVFGHQDIKRAILLMLLGGVHKFTHEGINLRGDINVCIVGDPSCAKSQFLKYASG 413
Query: 361 LVARSVYTSGKSSSAAGLTATVAKEQETGEFCIEAGALMLADNGICCIDEFDKMDVRDQV 540
+V RSVYTSGKSSSAAGLTA+VAKE ETGEFCIEAGALMLADNGICCIDEFDKMD+RDQV
Sbjct: 414 IVPRSVYTSGKSSSAAGLTASVAKEPETGEFCIEAGALMLADNGICCIDEFDKMDIRDQV 473
Query: 541 AIHEAMEQQTISITKAGIQATLNARTSILAAANPTGGRYDKSKPLKYNVALP 696
AIHEAMEQQTISITKAGIQATLNARTSILAAANP GGRYDKSKPLKYNVALP
Sbjct: 474 AIHEAMEQQTISITKAGIQATLNARTSILAAANPAGGRYDKSKPLKYNVALP 525
>ref|XP_004134510.1| PREDICTED: DNA replication licensing factor MCM6-like [Cucumis
sativus] gi|449515593|ref|XP_004164833.1| PREDICTED: DNA
replication licensing factor MCM6-like [Cucumis sativus]
Length = 839
Score = 410 bits (1054), Expect = e-112
Identities = 205/232 (88%), Positives = 219/232 (94%)
Frame = +1
Query: 1 LSYRLAFIANSVKISDGRRDSDIRNSKRDGEDDDSQQFTAEELDEIQTMRNTPDFFNKIV 180
LSYRLAFIANSV++ DGRR+ DIRN K+D D+DSQQFT ELD++Q MRNTPDFFN++V
Sbjct: 293 LSYRLAFIANSVQVLDGRRNFDIRNRKKDA-DEDSQQFTTGELDDVQRMRNTPDFFNRLV 351
Query: 181 DSIAPTVFGHQEIKRAILLMLLGGVHKITHEGINLRGDINVCIVGDPSCAKSQFLKYTTT 360
DSIAP VFGHQ+IKRAILLMLLGGVHK+THEGINLRGDINVCIVGDPSCAKSQFLKYT+
Sbjct: 352 DSIAPAVFGHQDIKRAILLMLLGGVHKLTHEGINLRGDINVCIVGDPSCAKSQFLKYTSG 411
Query: 361 LVARSVYTSGKSSSAAGLTATVAKEQETGEFCIEAGALMLADNGICCIDEFDKMDVRDQV 540
+V RSVYTSGKSSSAAGLTATVAKE ETGEFCIEAGALMLADNGICCIDEFDKMD+RDQV
Sbjct: 412 IVPRSVYTSGKSSSAAGLTATVAKEPETGEFCIEAGALMLADNGICCIDEFDKMDIRDQV 471
Query: 541 AIHEAMEQQTISITKAGIQATLNARTSILAAANPTGGRYDKSKPLKYNVALP 696
AIHEAMEQQTISITKAGIQATLNARTSILAAANP GGRYDKSKPLKYNVALP
Sbjct: 472 AIHEAMEQQTISITKAGIQATLNARTSILAAANPAGGRYDKSKPLKYNVALP 523
>ref|XP_002439489.1| hypothetical protein SORBIDRAFT_09g008010 [Sorghum bicolor]
gi|241944774|gb|EES17919.1| hypothetical protein
SORBIDRAFT_09g008010 [Sorghum bicolor]
Length = 831
Score = 410 bits (1054), Expect = e-112
Identities = 203/232 (87%), Positives = 217/232 (93%)
Frame = +1
Query: 1 LSYRLAFIANSVKISDGRRDSDIRNSKRDGEDDDSQQFTAEELDEIQTMRNTPDFFNKIV 180
LSYRLAF+ANSV+++DGRR+ DIR+ DG+D + Q+FT EE DE+ MRNTPDFFNKIV
Sbjct: 295 LSYRLAFVANSVQVADGRREVDIRDRDTDGDDSERQKFTEEEEDEVVRMRNTPDFFNKIV 354
Query: 181 DSIAPTVFGHQEIKRAILLMLLGGVHKITHEGINLRGDINVCIVGDPSCAKSQFLKYTTT 360
DSI PTVFGHQEIKRA+LLMLLGGVHKITHEGINLRGDINVCIVGDPSCAKSQFLKYT
Sbjct: 355 DSICPTVFGHQEIKRAVLLMLLGGVHKITHEGINLRGDINVCIVGDPSCAKSQFLKYTAG 414
Query: 361 LVARSVYTSGKSSSAAGLTATVAKEQETGEFCIEAGALMLADNGICCIDEFDKMDVRDQV 540
+V RSVYTSGKSSSAAGLTATVAKE ETGEFCIEAGALMLADNGICCIDEFDKMD++DQV
Sbjct: 415 IVPRSVYTSGKSSSAAGLTATVAKEPETGEFCIEAGALMLADNGICCIDEFDKMDIKDQV 474
Query: 541 AIHEAMEQQTISITKAGIQATLNARTSILAAANPTGGRYDKSKPLKYNVALP 696
AIHEAMEQQTISITKAGIQATLNARTSILAAANPTGGRYDKSKPLKYNVALP
Sbjct: 475 AIHEAMEQQTISITKAGIQATLNARTSILAAANPTGGRYDKSKPLKYNVALP 526
>gb|AFW77495.1| hypothetical protein ZEAMMB73_948044 [Zea mays]
Length = 709
Score = 410 bits (1053), Expect = e-112
Identities = 203/232 (87%), Positives = 216/232 (93%)
Frame = +1
Query: 1 LSYRLAFIANSVKISDGRRDSDIRNSKRDGEDDDSQQFTAEELDEIQTMRNTPDFFNKIV 180
LSYRLAF+ANSV+++DGRR+ DIR+ DG+D Q+FT EE DE+ MRNTPDFFNKIV
Sbjct: 295 LSYRLAFVANSVQVADGRREGDIRDRDTDGDDSGRQKFTEEEEDEVVRMRNTPDFFNKIV 354
Query: 181 DSIAPTVFGHQEIKRAILLMLLGGVHKITHEGINLRGDINVCIVGDPSCAKSQFLKYTTT 360
DSI PTVFGHQEIKRA+LLMLLGGVHKITHEGINLRGDINVCIVGDPSCAKSQFLKYT
Sbjct: 355 DSICPTVFGHQEIKRAVLLMLLGGVHKITHEGINLRGDINVCIVGDPSCAKSQFLKYTAG 414
Query: 361 LVARSVYTSGKSSSAAGLTATVAKEQETGEFCIEAGALMLADNGICCIDEFDKMDVRDQV 540
+V RSVYTSGKSSSAAGLTATVAKE ETGEFCIEAGALMLADNGICCIDEFDKMD++DQV
Sbjct: 415 IVPRSVYTSGKSSSAAGLTATVAKEPETGEFCIEAGALMLADNGICCIDEFDKMDIKDQV 474
Query: 541 AIHEAMEQQTISITKAGIQATLNARTSILAAANPTGGRYDKSKPLKYNVALP 696
AIHEAMEQQTISITKAGIQATLNARTSILAAANPTGGRYDKSKPLKYNVALP
Sbjct: 475 AIHEAMEQQTISITKAGIQATLNARTSILAAANPTGGRYDKSKPLKYNVALP 526