BLASTX nr result

ID: Coptis24_contig00039336 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00039336
         (287 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAH60859.1| ornithine decarboxylase [Populus nigra]               146   2e-33
gb|AEQ02350.1| ornithine decarboxylase [Erythroxylum coca]            145   3e-33
gb|ABN04356.1| putative ornithine decarboxylase [Theobroma cacao]     143   1e-32
ref|XP_002307756.1| predicted protein [Populus trichocarpa] gi|2...   142   2e-32
gb|AAO49839.1| ornithine decarboxylase [Vitis vinifera]               135   3e-30

>emb|CAH60859.1| ornithine decarboxylase [Populus nigra]
          Length = 200

 Score =  146 bits (368), Expect = 2e-33
 Identities = 71/95 (74%), Positives = 79/95 (83%)
 Frame = -3

Query: 285 AHIRYAASVGVNLTTFDSREEVEKIRKWHPKCSLLIRLKAPDDGGARCPLGPKYGALPEE 106
           +HI+YAASVGVNLTTFDS+EE++KIRKWH KC+LLIR+KAPDD GARCPLGPKYGALPEE
Sbjct: 10  SHIKYAASVGVNLTTFDSKEELDKIRKWHSKCALLIRIKAPDDSGARCPLGPKYGALPEE 69

Query: 105 VTPLLQAAHAARLXXXXXXXXXXXGATHSRAYRGA 1
           VTPLLQAA  ARL           GAT SRAY+GA
Sbjct: 70  VTPLLQAAQTARLNVVGVSFHIGSGATRSRAYKGA 104


>gb|AEQ02350.1| ornithine decarboxylase [Erythroxylum coca]
          Length = 413

 Score =  145 bits (366), Expect = 3e-33
 Identities = 69/95 (72%), Positives = 80/95 (84%)
 Frame = -3

Query: 285 AHIRYAASVGVNLTTFDSREEVEKIRKWHPKCSLLIRLKAPDDGGARCPLGPKYGALPEE 106
           +HI+YAASVGVNLTTFDS++E+EK+RKWHPKC+LL+R+KAP+DGGARCPLGPKYGALPEE
Sbjct: 126 SHIKYAASVGVNLTTFDSKDELEKMRKWHPKCALLLRVKAPEDGGARCPLGPKYGALPEE 185

Query: 105 VTPLLQAAHAARLXXXXXXXXXXXGATHSRAYRGA 1
           V PLLQAA AARL           GATH  +YRGA
Sbjct: 186 VIPLLQAAQAARLSVVGASFHIGSGATHFSSYRGA 220


>gb|ABN04356.1| putative ornithine decarboxylase [Theobroma cacao]
          Length = 411

 Score =  143 bits (361), Expect = 1e-32
 Identities = 70/95 (73%), Positives = 78/95 (82%)
 Frame = -3

Query: 285 AHIRYAASVGVNLTTFDSREEVEKIRKWHPKCSLLIRLKAPDDGGARCPLGPKYGALPEE 106
           +HI+YAA+VGVNLTTFDS+EE+EKI+KWHPKC+LLIR+KAPDDGGARCPLGPKYGALPEE
Sbjct: 126 SHIKYAATVGVNLTTFDSKEELEKIKKWHPKCALLIRVKAPDDGGARCPLGPKYGALPEE 185

Query: 105 VTPLLQAAHAARLXXXXXXXXXXXGATHSRAYRGA 1
           VTPLLQAA  ARL           GA   RAYR A
Sbjct: 186 VTPLLQAAQTARLTVTGVSFHIGSGAMQFRAYREA 220


>ref|XP_002307756.1| predicted protein [Populus trichocarpa] gi|222857205|gb|EEE94752.1|
           predicted protein [Populus trichocarpa]
          Length = 416

 Score =  142 bits (359), Expect = 2e-32
 Identities = 69/95 (72%), Positives = 78/95 (82%)
 Frame = -3

Query: 285 AHIRYAASVGVNLTTFDSREEVEKIRKWHPKCSLLIRLKAPDDGGARCPLGPKYGALPEE 106
           +HI+YAASVGVNLTTFDS+EE++KIRKWH KC+LLIR+KAPDD GARCPLGPKYGALP+E
Sbjct: 128 SHIKYAASVGVNLTTFDSKEELDKIRKWHSKCALLIRIKAPDDSGARCPLGPKYGALPDE 187

Query: 105 VTPLLQAAHAARLXXXXXXXXXXXGATHSRAYRGA 1
           VTPLLQAA  A+L           GAT SRAY GA
Sbjct: 188 VTPLLQAAQTAQLNVVGVSFHIGSGATRSRAYEGA 222


>gb|AAO49839.1| ornithine decarboxylase [Vitis vinifera]
          Length = 276

 Score =  135 bits (341), Expect = 3e-30
 Identities = 68/95 (71%), Positives = 77/95 (81%)
 Frame = -3

Query: 285 AHIRYAASVGVNLTTFDSREEVEKIRKWHPKCSLLIRLKAPDDGGARCPLGPKYGALPEE 106
           +HI+YAASVGVNLTTFDSR+E+EKIRK+HPKC+LLIR+K PDD GARCPL  KYGALPEE
Sbjct: 47  SHIKYAASVGVNLTTFDSRDEIEKIRKYHPKCALLIRVKPPDDSGARCPLESKYGALPEE 106

Query: 105 VTPLLQAAHAARLXXXXXXXXXXXGATHSRAYRGA 1
           VTPLLQAA  ARL           GAT ++AYRGA
Sbjct: 107 VTPLLQAAQDARLTVSGVSFHIGSGATLAQAYRGA 141