BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00039329
         (288 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002535295.1| conserved hypothetical protein [Ricinus comm...   140   1e-31
ref|NP_085566.1| hypothetical protein ArthMp044 [Arabidopsis tha...   100   2e-19
gb|AFW63421.1| hypothetical protein ZEAMMB73_397358 [Zea mays] g...    77   1e-12
ref|YP_717140.1| hypothetical protein BrnapMp043 [Brassica napus...    76   3e-12
emb|CAA27743.1| URF-1 [Citrullus lanatus]                              73   3e-11

>ref|XP_002535295.1| conserved hypothetical protein [Ricinus communis]
           gi|223523525|gb|EEF27089.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 139

 Score =  140 bits (353), Expect = 1e-31
 Identities = 73/91 (80%), Positives = 77/91 (84%)
 Frame = +2

Query: 14  EEPDD*ASSSEKDVSDATLPARTTFSIFLFGAGSVRRDTREILSISPKQIPPPMLPRSAY 193
           EEP D ASSS+KDVSDATL ARTTFSI +F AGSVRRD REI   S     PPMLP+SAY
Sbjct: 11  EEPVDEASSSDKDVSDATLSARTTFSIVIFLAGSVRRDKREIFYQSKADTAPPMLPQSAY 70

Query: 194 RGIEREDPGPEQVGLGYRAVSAVGGDRGRAR 286
           RGIEREDPGPEQVGLGYRAVSA+GGDRGRAR
Sbjct: 71  RGIEREDPGPEQVGLGYRAVSAMGGDRGRAR 101


>ref|NP_085566.1| hypothetical protein ArthMp044 [Arabidopsis thaliana]
           gi|45477063|sp|P92544.1|M1130_ARATH RecName:
           Full=Uncharacterized mitochondrial protein AtMg01130;
           AltName: Full=ORF106f gi|1785767|emb|CAA69797.1| unnamed
           protein product [Arabidopsis thaliana]
          Length = 106

 Score =  100 bits (248), Expect = 2e-19
 Identities = 54/73 (73%), Positives = 60/73 (82%), Gaps = 1/73 (1%)
 Frame = +2

Query: 14  EEPDD*ASSSEKDVSDATLPARTTFSIFLFGAGSVRRDTREILSISPK-QIPPPMLPRSA 190
           +EPDD ASSS+KDVSDATLPARTT+SI +F AGSVRRD RE+LSIS K  + P MLPR A
Sbjct: 32  DEPDDEASSSDKDVSDATLPARTTYSIVIFLAGSVRRDKREMLSISQKGTLSPAMLPRPA 91

Query: 191 YRGIEREDPGPEQ 229
           YRGIERED G  Q
Sbjct: 92  YRGIEREDRGGVQ 104


>gb|AFW63421.1| hypothetical protein ZEAMMB73_397358 [Zea mays]
           gi|413923490|gb|AFW63422.1| hypothetical protein
           ZEAMMB73_397358 [Zea mays] gi|413923799|gb|AFW63731.1|
           hypothetical protein ZEAMMB73_879039 [Zea mays]
           gi|413923800|gb|AFW63732.1| hypothetical protein
           ZEAMMB73_879039 [Zea mays]
          Length = 172

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 48/88 (54%), Positives = 58/88 (65%)
 Frame = +2

Query: 2   NIIYEEPDD*ASSSEKDVSDATLPARTTFSIFLFGAGSVRRDTREILSISPKQIPPPMLP 181
           NII EEPDD AS S+KDVSDAT        +++ G+G  ++D   +  ISPK+IPP    
Sbjct: 24  NIILEEPDDEASKSDKDVSDAT-----GLQLYM-GSGGKKKDM--LFPISPKRIPPSFHG 75

Query: 182 RSAYRGIEREDPGPEQVGLGYRAVSAVG 265
                 + REDPGPEQVGLGYRAVSAVG
Sbjct: 76  PLTEEEM-REDPGPEQVGLGYRAVSAVG 102


>ref|YP_717140.1| hypothetical protein BrnapMp043 [Brassica napus]
           gi|353526443|ref|YP_004927515.1| orf100b (mitochondrion)
           [Brassica oleracea] gi|353526482|ref|YP_004927553.1|
           orf100b (mitochondrion) [Brassica carinata]
           gi|353526689|ref|YP_004927858.1| orf100b (mitochondrion)
           [Brassica rapa subsp. campestris]
           gi|353531371|ref|YP_004927761.1| orf100b (mitochondrion)
           [Brassica juncea] gi|37591087|dbj|BAC98889.1|
           hypothetical protein [Brassica napus]
           gi|335354877|gb|AEH43433.1| orf100b [Brassica rapa
           subsp. campestris] gi|335354988|gb|AEH43543.1| orf100b
           [Brassica oleracea] gi|335355013|gb|AEH43567.1| orf100b
           [Brassica carinata] gi|335355104|gb|AEH43657.1| orf100b
           [Brassica juncea] gi|339511304|emb|CBX48359.1| unnamed
           protein product [Brassica napus]
          Length = 100

 Score = 76.3 bits (186), Expect = 3e-12
 Identities = 39/53 (73%), Positives = 43/53 (81%), Gaps = 2/53 (3%)
 Frame = +1

Query: 91  YFSFWGGFGQEGHKRDPFYQSKADTAP-HAPTIRLPRNRKGGP-GARASWVGV 243
           +  F+GGFGQE  KRD FYQSK D+AP HAPT RLPRNRKGGP G+RAS VGV
Sbjct: 48  FCDFFGGFGQERQKRDAFYQSKGDSAPRHAPTARLPRNRKGGPGGSRASRVGV 100


>emb|CAA27743.1| URF-1 [Citrullus lanatus]
          Length = 316

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 46/75 (61%), Positives = 49/75 (65%), Gaps = 4/75 (5%)
 Frame = +3

Query: 3   TSFMRSRTTKPPPQKKMSPTLLSRQEPLF-LFFFLGRVRSGGTQERSFLSVQSRYRPPCS 179
           TSFMRSRTTKPPPQ KMSP  LSRQEP F   FF G  +    +ER F SV+SRYRPP  
Sbjct: 7   TSFMRSRTTKPPPQIKMSPMRLSRQEPFFDCDFFCGFGQVIEAKERCFPSVKSRYRPP-- 64

Query: 180 HDP---LTEE*KGRT 215
           H P   L    KGRT
Sbjct: 65  HAPPVRLPRNRKGRT 79



 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 33/60 (55%), Positives = 38/60 (63%), Gaps = 2/60 (3%)
 Frame = +1

Query: 85  FFYFSFWGGFGQEGHKRDPFYQSKADT--APHAPTIRLPRNRKGGPGARASWVGV*SRKR 258
           FF   F+ GFGQ    ++  + S       PHAP +RLPRNRKG  GARASWVGV SRKR
Sbjct: 34  FFDCDFFCGFGQVIEAKERCFPSVKSRYRPPHAPPVRLPRNRKGRTGARASWVGVKSRKR 93