BLASTX nr result
ID: Coptis24_contig00039124
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00039124 (372 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002312533.1| predicted protein [Populus trichocarpa] gi|2... 84 8e-21 ref|XP_002517130.1| conserved hypothetical protein [Ricinus comm... 83 1e-20 ref|XP_002314697.1| predicted protein [Populus trichocarpa] gi|2... 81 7e-20 ref|XP_003590633.1| Ethylene receptor [Medicago truncatula] gi|3... 85 3e-19 emb|CBI26259.3| unnamed protein product [Vitis vinifera] 92 4e-17 >ref|XP_002312533.1| predicted protein [Populus trichocarpa] gi|222852353|gb|EEE89900.1| predicted protein [Populus trichocarpa] Length = 211 Score = 84.0 bits (206), Expect(2) = 8e-21 Identities = 35/58 (60%), Positives = 47/58 (81%) Frame = -1 Query: 177 HKDFRRSMQEMVESRKCSDVTNDWDFLHELLLCYLALNPKHAHKYILSAFADLLISLV 4 + DF+ SMQEM+E+R+ DV WD+LHELL CYL LNPKH HK+I+SAFAD+++ L+ Sbjct: 136 YTDFKHSMQEMIEARELRDVRAKWDYLHELLSCYLKLNPKHTHKFIISAFADIVVCLL 193 Score = 41.2 bits (95), Expect(2) = 8e-21 Identities = 25/58 (43%), Positives = 26/58 (44%) Frame = -3 Query: 349 DFATILTSQRFFFSSPGRXXXXXXXXXXXXXXXXXXXXXXXXTLVGGGVPLSTYSPDP 176 DFATIL SQR FFSSPGR V GGV + YSPDP Sbjct: 90 DFATILASQRLFFSSPGRSNSIIESLPEPQTP------------VSGGVAIKKYSPDP 135 >ref|XP_002517130.1| conserved hypothetical protein [Ricinus communis] gi|223543765|gb|EEF45293.1| conserved hypothetical protein [Ricinus communis] Length = 230 Score = 83.2 bits (204), Expect(2) = 1e-20 Identities = 37/58 (63%), Positives = 47/58 (81%) Frame = -1 Query: 177 HKDFRRSMQEMVESRKCSDVTNDWDFLHELLLCYLALNPKHAHKYILSAFADLLISLV 4 + DFR+SM EM+E+RK DV DWD+LHELL CYL LNPK HK+I+SAFAD++I L+ Sbjct: 145 YADFRQSMLEMIEARKPRDVKADWDYLHELLSCYLNLNPKQTHKFIISAFADIVICLL 202 Score = 41.2 bits (95), Expect(2) = 1e-20 Identities = 24/59 (40%), Positives = 26/59 (44%) Frame = -3 Query: 352 PDFATILTSQRFFFSSPGRXXXXXXXXXXXXXXXXXXXXXXXXTLVGGGVPLSTYSPDP 176 PDFA I SQRFFFSSPGR + GGV + YSPDP Sbjct: 94 PDFAAIFASQRFFFSSPGRSNSIIESPETPSAEPQTP--------LNGGVAVKKYSPDP 144 >ref|XP_002314697.1| predicted protein [Populus trichocarpa] gi|222863737|gb|EEF00868.1| predicted protein [Populus trichocarpa] Length = 218 Score = 81.3 bits (199), Expect(2) = 7e-20 Identities = 33/56 (58%), Positives = 47/56 (83%) Frame = -1 Query: 171 DFRRSMQEMVESRKCSDVTNDWDFLHELLLCYLALNPKHAHKYILSAFADLLISLV 4 DF+ SMQEM+E+R+ DV +WD+LHEL+ CYL LNPK+ HK+I+SAFAD+++ L+ Sbjct: 137 DFKNSMQEMIEAREIRDVRANWDYLHELISCYLKLNPKNTHKFIISAFADIIVCLL 192 Score = 40.8 bits (94), Expect(2) = 7e-20 Identities = 25/61 (40%), Positives = 28/61 (45%) Frame = -3 Query: 358 TTPDFATILTSQRFFFSSPGRXXXXXXXXXXXXXXXXXXXXXXXXTLVGGGVPLSTYSPD 179 +TPDFATI+ SQRFF SSPGR V GGV + YS D Sbjct: 86 STPDFATIIASQRFFSSSPGRSNSIIESMQELHTP------------VSGGVAIKKYSLD 133 Query: 178 P 176 P Sbjct: 134 P 134 >ref|XP_003590633.1| Ethylene receptor [Medicago truncatula] gi|355479681|gb|AES60884.1| Ethylene receptor [Medicago truncatula] Length = 237 Score = 85.1 bits (209), Expect(2) = 3e-19 Identities = 40/59 (67%), Positives = 51/59 (86%), Gaps = 1/59 (1%) Frame = -1 Query: 177 HKDFRRSMQEMVESR-KCSDVTNDWDFLHELLLCYLALNPKHAHKYILSAFADLLISLV 4 + DFRRSMQEMVE+R + DV ++W+ LHELLLCYLALNPK+ HK+IL AFADLL++L+ Sbjct: 177 YMDFRRSMQEMVEARPELMDVKSNWNILHELLLCYLALNPKNTHKFILGAFADLLVTLM 235 Score = 34.7 bits (78), Expect(2) = 3e-19 Identities = 25/80 (31%), Positives = 26/80 (32%), Gaps = 15/80 (18%) Frame = -3 Query: 370 EPESTTPDFATILTSQRFFFSSPG---------------RXXXXXXXXXXXXXXXXXXXX 236 EPE DFA SQRFFFSSPG Sbjct: 97 EPEPEPADFAAAFASQRFFFSSPGSSNSLIEYTNTDCIQHSSVPLMDKSNSTKREKKQEK 156 Query: 235 XXXXTLVGGGVPLSTYSPDP 176 L G V + TYSPDP Sbjct: 157 EKEEVLFNGSVAVPTYSPDP 176 >emb|CBI26259.3| unnamed protein product [Vitis vinifera] Length = 224 Score = 92.0 bits (227), Expect = 4e-17 Identities = 41/69 (59%), Positives = 53/69 (76%) Frame = -1 Query: 210 GVYHYLHIHQIHKDFRRSMQEMVESRKCSDVTNDWDFLHELLLCYLALNPKHAHKYILSA 31 GV + + ++DFRRSMQEM E+R+ DV DWD+LHELLLCYL LNPKH HK+I+ A Sbjct: 132 GVAVHTYSPNPYEDFRRSMQEMAEARELRDVAADWDYLHELLLCYLTLNPKHTHKFIIRA 191 Query: 30 FADLLISLV 4 FADL++ L+ Sbjct: 192 FADLIVCLM 200