BLASTX nr result

ID: Coptis24_contig00039124 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00039124
         (372 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002312533.1| predicted protein [Populus trichocarpa] gi|2...    84   8e-21
ref|XP_002517130.1| conserved hypothetical protein [Ricinus comm...    83   1e-20
ref|XP_002314697.1| predicted protein [Populus trichocarpa] gi|2...    81   7e-20
ref|XP_003590633.1| Ethylene receptor [Medicago truncatula] gi|3...    85   3e-19
emb|CBI26259.3| unnamed protein product [Vitis vinifera]               92   4e-17

>ref|XP_002312533.1| predicted protein [Populus trichocarpa] gi|222852353|gb|EEE89900.1|
           predicted protein [Populus trichocarpa]
          Length = 211

 Score = 84.0 bits (206), Expect(2) = 8e-21
 Identities = 35/58 (60%), Positives = 47/58 (81%)
 Frame = -1

Query: 177 HKDFRRSMQEMVESRKCSDVTNDWDFLHELLLCYLALNPKHAHKYILSAFADLLISLV 4
           + DF+ SMQEM+E+R+  DV   WD+LHELL CYL LNPKH HK+I+SAFAD+++ L+
Sbjct: 136 YTDFKHSMQEMIEARELRDVRAKWDYLHELLSCYLKLNPKHTHKFIISAFADIVVCLL 193



 Score = 41.2 bits (95), Expect(2) = 8e-21
 Identities = 25/58 (43%), Positives = 26/58 (44%)
 Frame = -3

Query: 349 DFATILTSQRFFFSSPGRXXXXXXXXXXXXXXXXXXXXXXXXTLVGGGVPLSTYSPDP 176
           DFATIL SQR FFSSPGR                          V GGV +  YSPDP
Sbjct: 90  DFATILASQRLFFSSPGRSNSIIESLPEPQTP------------VSGGVAIKKYSPDP 135


>ref|XP_002517130.1| conserved hypothetical protein [Ricinus communis]
           gi|223543765|gb|EEF45293.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 230

 Score = 83.2 bits (204), Expect(2) = 1e-20
 Identities = 37/58 (63%), Positives = 47/58 (81%)
 Frame = -1

Query: 177 HKDFRRSMQEMVESRKCSDVTNDWDFLHELLLCYLALNPKHAHKYILSAFADLLISLV 4
           + DFR+SM EM+E+RK  DV  DWD+LHELL CYL LNPK  HK+I+SAFAD++I L+
Sbjct: 145 YADFRQSMLEMIEARKPRDVKADWDYLHELLSCYLNLNPKQTHKFIISAFADIVICLL 202



 Score = 41.2 bits (95), Expect(2) = 1e-20
 Identities = 24/59 (40%), Positives = 26/59 (44%)
 Frame = -3

Query: 352 PDFATILTSQRFFFSSPGRXXXXXXXXXXXXXXXXXXXXXXXXTLVGGGVPLSTYSPDP 176
           PDFA I  SQRFFFSSPGR                          + GGV +  YSPDP
Sbjct: 94  PDFAAIFASQRFFFSSPGRSNSIIESPETPSAEPQTP--------LNGGVAVKKYSPDP 144


>ref|XP_002314697.1| predicted protein [Populus trichocarpa] gi|222863737|gb|EEF00868.1|
           predicted protein [Populus trichocarpa]
          Length = 218

 Score = 81.3 bits (199), Expect(2) = 7e-20
 Identities = 33/56 (58%), Positives = 47/56 (83%)
 Frame = -1

Query: 171 DFRRSMQEMVESRKCSDVTNDWDFLHELLLCYLALNPKHAHKYILSAFADLLISLV 4
           DF+ SMQEM+E+R+  DV  +WD+LHEL+ CYL LNPK+ HK+I+SAFAD+++ L+
Sbjct: 137 DFKNSMQEMIEAREIRDVRANWDYLHELISCYLKLNPKNTHKFIISAFADIIVCLL 192



 Score = 40.8 bits (94), Expect(2) = 7e-20
 Identities = 25/61 (40%), Positives = 28/61 (45%)
 Frame = -3

Query: 358 TTPDFATILTSQRFFFSSPGRXXXXXXXXXXXXXXXXXXXXXXXXTLVGGGVPLSTYSPD 179
           +TPDFATI+ SQRFF SSPGR                          V GGV +  YS D
Sbjct: 86  STPDFATIIASQRFFSSSPGRSNSIIESMQELHTP------------VSGGVAIKKYSLD 133

Query: 178 P 176
           P
Sbjct: 134 P 134


>ref|XP_003590633.1| Ethylene receptor [Medicago truncatula] gi|355479681|gb|AES60884.1|
           Ethylene receptor [Medicago truncatula]
          Length = 237

 Score = 85.1 bits (209), Expect(2) = 3e-19
 Identities = 40/59 (67%), Positives = 51/59 (86%), Gaps = 1/59 (1%)
 Frame = -1

Query: 177 HKDFRRSMQEMVESR-KCSDVTNDWDFLHELLLCYLALNPKHAHKYILSAFADLLISLV 4
           + DFRRSMQEMVE+R +  DV ++W+ LHELLLCYLALNPK+ HK+IL AFADLL++L+
Sbjct: 177 YMDFRRSMQEMVEARPELMDVKSNWNILHELLLCYLALNPKNTHKFILGAFADLLVTLM 235



 Score = 34.7 bits (78), Expect(2) = 3e-19
 Identities = 25/80 (31%), Positives = 26/80 (32%), Gaps = 15/80 (18%)
 Frame = -3

Query: 370 EPESTTPDFATILTSQRFFFSSPG---------------RXXXXXXXXXXXXXXXXXXXX 236
           EPE    DFA    SQRFFFSSPG                                    
Sbjct: 97  EPEPEPADFAAAFASQRFFFSSPGSSNSLIEYTNTDCIQHSSVPLMDKSNSTKREKKQEK 156

Query: 235 XXXXTLVGGGVPLSTYSPDP 176
                L  G V + TYSPDP
Sbjct: 157 EKEEVLFNGSVAVPTYSPDP 176


>emb|CBI26259.3| unnamed protein product [Vitis vinifera]
          Length = 224

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 41/69 (59%), Positives = 53/69 (76%)
 Frame = -1

Query: 210 GVYHYLHIHQIHKDFRRSMQEMVESRKCSDVTNDWDFLHELLLCYLALNPKHAHKYILSA 31
           GV  + +    ++DFRRSMQEM E+R+  DV  DWD+LHELLLCYL LNPKH HK+I+ A
Sbjct: 132 GVAVHTYSPNPYEDFRRSMQEMAEARELRDVAADWDYLHELLLCYLTLNPKHTHKFIIRA 191

Query: 30  FADLLISLV 4
           FADL++ L+
Sbjct: 192 FADLIVCLM 200


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