BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00038960
         (339 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003543761.1| PREDICTED: synaptonemal complex protein 1-li...    88   8e-16
ref|XP_002302294.1| predicted protein [Populus trichocarpa] gi|2...    88   8e-16
ref|XP_003544792.1| PREDICTED: synaptonemal complex protein 1-li...    87   1e-15
ref|XP_002513917.1| Ribosome-binding protein, putative [Ricinus ...    85   5e-15
ref|NP_173645.3| synaptonemal complex protein 1 [Arabidopsis tha...    84   9e-15

>ref|XP_003543761.1| PREDICTED: synaptonemal complex protein 1-like [Glycine max]
          Length = 866

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 44/51 (86%), Positives = 48/51 (94%)
 Frame = +1

Query: 187 FANLKLTAEKLVKEQASVKTDLEMANLKVKKSLEHIHALEEKLQNAINENA 339
           FANLKLTAEKLVKEQASVKTDLE AN K+KKS E++HALEEKLQNA+NENA
Sbjct: 44  FANLKLTAEKLVKEQASVKTDLENANAKLKKSQEYVHALEEKLQNALNENA 94


>ref|XP_002302294.1| predicted protein [Populus trichocarpa] gi|222844020|gb|EEE81567.1|
           predicted protein [Populus trichocarpa]
          Length = 874

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 43/51 (84%), Positives = 47/51 (92%)
 Frame = +1

Query: 187 FANLKLTAEKLVKEQASVKTDLEMANLKVKKSLEHIHALEEKLQNAINENA 339
           FANLK+TAEKLVKEQASVKTDL MAN K+KKS+EHIH LE+KLQNA NENA
Sbjct: 41  FANLKITAEKLVKEQASVKTDLGMANTKLKKSMEHIHVLEDKLQNAFNENA 91


>ref|XP_003544792.1| PREDICTED: synaptonemal complex protein 1-like [Glycine max]
          Length = 866

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 44/51 (86%), Positives = 48/51 (94%)
 Frame = +1

Query: 187 FANLKLTAEKLVKEQASVKTDLEMANLKVKKSLEHIHALEEKLQNAINENA 339
           FANLKLTAEKLVKEQASVKTDLE AN K+KKS E++HALEEKLQNA+NENA
Sbjct: 44  FANLKLTAEKLVKEQASVKTDLENANSKLKKSQEYVHALEEKLQNALNENA 94


>ref|XP_002513917.1| Ribosome-binding protein, putative [Ricinus communis]
           gi|223547003|gb|EEF48500.1| Ribosome-binding protein,
           putative [Ricinus communis]
          Length = 868

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 43/51 (84%), Positives = 46/51 (90%)
 Frame = +1

Query: 187 FANLKLTAEKLVKEQASVKTDLEMANLKVKKSLEHIHALEEKLQNAINENA 339
           F NLKLTAEKL+KEQASVKTDLE+AN K+KKS EHI ALEEKLQNA NENA
Sbjct: 45  FTNLKLTAEKLIKEQASVKTDLEIANSKLKKSTEHITALEEKLQNAFNENA 95


>ref|NP_173645.3| synaptonemal complex protein 1 [Arabidopsis thaliana]
           gi|47606316|sp|Q9LME2.1|SYCP1_ARATH RecName:
           Full=Synaptonemal complex protein 1; AltName:
           Full=Synaptonemal complex central region protein ZYP1a
           gi|9392688|gb|AAF87265.1|AC068562_12 T16E15.12
           [Arabidopsis thaliana] gi|66394506|gb|AAY46119.1|
           synaptonemal complex central region protein ZYP1a
           [Arabidopsis thaliana] gi|332192096|gb|AEE30217.1|
           synaptonemal complex protein 1 [Arabidopsis thaliana]
          Length = 871

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 39/51 (76%), Positives = 49/51 (96%)
 Frame = +1

Query: 187 FANLKLTAEKLVKEQASVKTDLEMANLKVKKSLEHIHALEEKLQNAINENA 339
           F+NLKLTAEKLVK+QA+++TDLE+AN K+KKS+EH++ALEEKLQNA NENA
Sbjct: 41  FSNLKLTAEKLVKDQAAMRTDLELANCKLKKSMEHVYALEEKLQNAFNENA 91