BLASTX nr result

ID: Coptis24_contig00038925 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00038925
         (263 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003623897.1| Ripening-related protein [Medicago truncatul...   143   1e-32
ref|XP_003605687.1| Ripening-related protein [Medicago truncatul...   142   2e-32
ref|XP_003605681.1| Ripening-related protein [Medicago truncatul...   142   2e-32
ref|XP_003552385.1| PREDICTED: putative ripening-related protein...   141   5e-32
ref|XP_003623919.1| Ripening-related protein [Medicago truncatul...   140   8e-32

>ref|XP_003623897.1| Ripening-related protein [Medicago truncatula]
           gi|355498912|gb|AES80115.1| Ripening-related protein
           [Medicago truncatula]
          Length = 189

 Score =  143 bits (361), Expect = 1e-32
 Identities = 65/87 (74%), Positives = 71/87 (81%)
 Frame = -3

Query: 261 PGQCNTENDSDCCVQGELYTVYTCSPPVPSPTNALLTLNSFDEGGDGSGPSECDNEYRSN 82
           PGQCN ENDSDCCVQ ++YT Y CSP V + T A LTLNSF  GGDG GPSECDN+Y S+
Sbjct: 43  PGQCNQENDSDCCVQEKMYTTYECSPAVSTYTKAYLTLNSFQNGGDGGGPSECDNQYHSD 102

Query: 81  DNLVVALSTGWFNHESRCNKSITISAN 1
           D  VVALSTGWFNHESRC K+ITISAN
Sbjct: 103 DTPVVALSTGWFNHESRCLKNITISAN 129


>ref|XP_003605687.1| Ripening-related protein [Medicago truncatula]
           gi|355506742|gb|AES87884.1| Ripening-related protein
           [Medicago truncatula]
          Length = 170

 Score =  142 bits (359), Expect = 2e-32
 Identities = 63/87 (72%), Positives = 72/87 (82%)
 Frame = -3

Query: 261 PGQCNTENDSDCCVQGELYTVYTCSPPVPSPTNALLTLNSFDEGGDGSGPSECDNEYRSN 82
           PGQCN ENDSDCCVQG++YT Y CSP V + T A LTLNSF++GGDG GPSECD +Y S+
Sbjct: 24  PGQCNQENDSDCCVQGKMYTTYVCSPSVSTHTKAYLTLNSFEKGGDGGGPSECDKQYHSD 83

Query: 81  DNLVVALSTGWFNHESRCNKSITISAN 1
           D  VVALSTGWFNH+SRC  +ITISAN
Sbjct: 84  DTPVVALSTGWFNHKSRCLNNITISAN 110


>ref|XP_003605681.1| Ripening-related protein [Medicago truncatula]
           gi|355506736|gb|AES87878.1| Ripening-related protein
           [Medicago truncatula]
          Length = 348

 Score =  142 bits (359), Expect = 2e-32
 Identities = 63/87 (72%), Positives = 72/87 (82%)
 Frame = -3

Query: 261 PGQCNTENDSDCCVQGELYTVYTCSPPVPSPTNALLTLNSFDEGGDGSGPSECDNEYRSN 82
           PGQCN ENDSDCCVQG++YT Y CSP V + T A LTLNSF++GGDG GPSECD +Y S+
Sbjct: 202 PGQCNQENDSDCCVQGKMYTTYVCSPSVSTHTKAYLTLNSFEKGGDGGGPSECDKQYHSD 261

Query: 81  DNLVVALSTGWFNHESRCNKSITISAN 1
           D  VVALSTGWFNH+SRC  +ITISAN
Sbjct: 262 DTPVVALSTGWFNHKSRCLNNITISAN 288



 Score =  135 bits (339), Expect = 5e-30
 Identities = 61/86 (70%), Positives = 68/86 (79%)
 Frame = -3

Query: 258 GQCNTENDSDCCVQGELYTVYTCSPPVPSPTNALLTLNSFDEGGDGSGPSECDNEYRSND 79
           GQCN ENDSDCCVQG++YT Y CSP V + T A LTLNSF +GGDG GPS CDN+Y S+D
Sbjct: 43  GQCNKENDSDCCVQGKMYTTYECSPSVSTHTKAYLTLNSFQKGGDGGGPSACDNQYHSDD 102

Query: 78  NLVVALSTGWFNHESRCNKSITISAN 1
             VVALSTGWFN +SRC   ITISAN
Sbjct: 103 TPVVALSTGWFNDKSRCLNKITISAN 128


>ref|XP_003552385.1| PREDICTED: putative ripening-related protein 2-like [Glycine max]
          Length = 188

 Score =  141 bits (356), Expect = 5e-32
 Identities = 62/87 (71%), Positives = 71/87 (81%)
 Frame = -3

Query: 261 PGQCNTENDSDCCVQGELYTVYTCSPPVPSPTNALLTLNSFDEGGDGSGPSECDNEYRSN 82
           PGQCN ENDSDCC +G++YT Y CSPP+ S T A LTLNSF +GGDG GPSECDN+Y S+
Sbjct: 42  PGQCNQENDSDCCKEGKMYTTYECSPPMSSNTKAYLTLNSFQKGGDGGGPSECDNQYHSD 101

Query: 81  DNLVVALSTGWFNHESRCNKSITISAN 1
           D  VVALSTGWFNH+SRC  +ITIS N
Sbjct: 102 DTPVVALSTGWFNHKSRCLHNITISGN 128


>ref|XP_003623919.1| Ripening-related protein [Medicago truncatula]
           gi|355498934|gb|AES80137.1| Ripening-related protein
           [Medicago truncatula]
          Length = 255

 Score =  140 bits (354), Expect = 8e-32
 Identities = 62/87 (71%), Positives = 72/87 (82%)
 Frame = -3

Query: 261 PGQCNTENDSDCCVQGELYTVYTCSPPVPSPTNALLTLNSFDEGGDGSGPSECDNEYRSN 82
           PGQCN ENDSDCCV+G++YT Y CSP V + T A LTLNSF++GGDG GPSECD +Y S+
Sbjct: 43  PGQCNQENDSDCCVEGKMYTTYVCSPYVSTHTKAYLTLNSFEKGGDGGGPSECDKQYHSD 102

Query: 81  DNLVVALSTGWFNHESRCNKSITISAN 1
           D  VVALSTGWFNH+SRC  +ITISAN
Sbjct: 103 DTPVVALSTGWFNHKSRCLNNITISAN 129


Top