BLASTX nr result

ID: Coptis24_contig00038900 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00038900
         (335 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36230.3| unnamed protein product [Vitis vinifera]               43   9e-08
ref|XP_002280900.1| PREDICTED: uncharacterized protein LOC100248...    43   9e-08
emb|CAN64395.1| hypothetical protein VITISV_036654 [Vitis vinifera]    43   9e-08

>emb|CBI36230.3| unnamed protein product [Vitis vinifera]
          Length = 1790

 Score = 43.1 bits (100), Expect(2) = 9e-08
 Identities = 20/33 (60%), Positives = 27/33 (81%)
 Frame = +3

Query: 9    EKILQILMLLVVIGSIYSQLVYLRENIDALPYI 107
            E IL+IL L VVI  I SQL+Y+R+N+D++PYI
Sbjct: 1470 EGILRILTLSVVIACIVSQLLYIRDNVDSVPYI 1502



 Score = 37.7 bits (86), Expect(2) = 9e-08
 Identities = 24/56 (42%), Positives = 33/56 (58%)
 Frame = +2

Query: 95   PSLYIVMLGIQTFTFSLPLIMGTEFLFDWKATQFCRAPSFGLEKLQRYRHRVIDAT 262
            P + +VMLG+Q   +SLPLI   E LF  KA+     PS+ L++ Q +   VID T
Sbjct: 1500 PYISLVMLGVQVLGYSLPLITDAEALFK-KASDSYGTPSYELDRNQWF--HVIDYT 1552


>ref|XP_002280900.1| PREDICTED: uncharacterized protein LOC100248030 [Vitis vinifera]
          Length = 1059

 Score = 43.1 bits (100), Expect(2) = 9e-08
 Identities = 20/33 (60%), Positives = 27/33 (81%)
 Frame = +3

Query: 9   EKILQILMLLVVIGSIYSQLVYLRENIDALPYI 107
           E IL+IL L VVI  I SQL+Y+R+N+D++PYI
Sbjct: 733 EGILRILTLSVVIACIVSQLLYIRDNVDSVPYI 765



 Score = 37.7 bits (86), Expect(2) = 9e-08
 Identities = 24/56 (42%), Positives = 33/56 (58%)
 Frame = +2

Query: 95  PSLYIVMLGIQTFTFSLPLIMGTEFLFDWKATQFCRAPSFGLEKLQRYRHRVIDAT 262
           P + +VMLG+Q   +SLPLI   E LF  KA+     PS+ L++ Q +   VID T
Sbjct: 763 PYISLVMLGVQVLGYSLPLITDAEALFK-KASDSYGTPSYELDRNQWF--HVIDYT 815


>emb|CAN64395.1| hypothetical protein VITISV_036654 [Vitis vinifera]
          Length = 1037

 Score = 43.1 bits (100), Expect(2) = 9e-08
 Identities = 20/33 (60%), Positives = 27/33 (81%)
 Frame = +3

Query: 9   EKILQILMLLVVIGSIYSQLVYLRENIDALPYI 107
           E IL+IL L VVI  I SQL+Y+R+N+D++PYI
Sbjct: 711 EGILRILTLSVVIACIVSQLLYIRDNVDSVPYI 743



 Score = 37.7 bits (86), Expect(2) = 9e-08
 Identities = 24/56 (42%), Positives = 33/56 (58%)
 Frame = +2

Query: 95  PSLYIVMLGIQTFTFSLPLIMGTEFLFDWKATQFCRAPSFGLEKLQRYRHRVIDAT 262
           P + +VMLG+Q   +SLPLI   E LF  KA+     PS+ L++ Q +   VID T
Sbjct: 741 PYISLVMLGVQVLGYSLPLITDAEALFK-KASDSYGTPSYELDRNQWF--HVIDYT 793


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