BLASTX nr result

ID: Coptis24_contig00038887 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00038887
         (232 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004137882.1| PREDICTED: ABC transporter C family member 1...    75   7e-12
emb|CAN79782.1| hypothetical protein VITISV_002631 [Vitis vinifera]    74   1e-11
emb|CAN65321.1| hypothetical protein VITISV_028038 [Vitis vinifera]    74   1e-11
ref|XP_003520384.1| PREDICTED: uncharacterized protein LOC100795...    74   2e-11
emb|CAN59999.1| hypothetical protein VITISV_001733 [Vitis vinifera]    74   2e-11

>ref|XP_004137882.1| PREDICTED: ABC transporter C family member 13-like [Cucumis sativus]
          Length = 2377

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 33/52 (63%), Positives = 41/52 (78%)
 Frame = -3

Query: 230  VCFVQNMSRDCTKLDPRSLKCVFLGYAHSQKGYRCYHPPSRRFLVSMDVTFF 75
            VCFV+++    TKLDP+SLKC+FLGY+  QKGYRCY P  +R+LVS DV FF
Sbjct: 1242 VCFVRDVRPHHTKLDPKSLKCIFLGYSRVQKGYRCYCPTLKRYLVSPDVVFF 1293


>emb|CAN79782.1| hypothetical protein VITISV_002631 [Vitis vinifera]
          Length = 971

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 35/67 (52%), Positives = 40/67 (59%)
 Frame = -3

Query: 230 VCFVQNMSRDCTKLDPRSLKCVFLGYAHSQKGYRCYHPPSRRFLVSMDVTFF*HEAYFQG 51
           V FV      CTKL  R+L+CVF+GYA  +K YRCYHPP RR  V+MDV F     YF  
Sbjct: 406 VAFVHLHKHQCTKLTSRALQCVFVGYALHKKEYRCYHPPIRRMFVTMDVVFHEDSMYFSS 465

Query: 50  AVEFSGE 30
             E  GE
Sbjct: 466 KFELHGE 472


>emb|CAN65321.1| hypothetical protein VITISV_028038 [Vitis vinifera]
          Length = 444

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 34/68 (50%), Positives = 42/68 (61%)
 Frame = -3

Query: 230 VCFVQNMSRDCTKLDPRSLKCVFLGYAHSQKGYRCYHPPSRRFLVSMDVTFF*HEAYFQG 51
           V FV       TKL  R+L+CVF+GYA  +KGYRCYHPP+RR  ++MDV F     YF  
Sbjct: 373 VAFVHLHKHQRTKLTSRALQCVFVGYALHKKGYRCYHPPTRRMFITMDVVFHEDSMYFSS 432

Query: 50  AVEFSGEW 27
             E  GE+
Sbjct: 433 ESELQGEY 440


>ref|XP_003520384.1| PREDICTED: uncharacterized protein LOC100795634 [Glycine max]
          Length = 1815

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 33/64 (51%), Positives = 43/64 (67%)
 Frame = -3

Query: 227  CFVQNMSRDCTKLDPRSLKCVFLGYAHSQKGYRCYHPPSRRFLVSMDVTFF*HEAYFQGA 48
            CFV ++S    KL  RS+KCVFLGY+  QKGY+CY P  RR+ +S DVTFF    +F  +
Sbjct: 814  CFVHDLSPGLDKLSARSVKCVFLGYSRLQKGYKCYSPTMRRYYMSADVTFFEDTPFFSSS 873

Query: 47   VEFS 36
            V+ S
Sbjct: 874  VDHS 877


>emb|CAN59999.1| hypothetical protein VITISV_001733 [Vitis vinifera]
          Length = 616

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 34/69 (49%), Positives = 47/69 (68%), Gaps = 5/69 (7%)
 Frame = -3

Query: 230 VCFVQNMSRDCTKLDPRSLKCVFLGYAHSQKGYRCYHPPSRRFLVSMDVTFF*HEAYF-- 57
           + FV   S +  KLDPR+LKC+F+GY+ +QKGY+CYHPP++RF  S+DV F   + YF  
Sbjct: 74  ISFVYIHSNNHGKLDPRALKCIFVGYSSTQKGYKCYHPPTKRFFDSIDVIFIETKNYFPN 133

Query: 56  ---QGAVEF 39
              QG + F
Sbjct: 134 PYLQGEISF 142


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