BLASTX nr result

ID: Coptis24_contig00038757 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00038757
         (396 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI31205.3| unnamed protein product [Vitis vinifera]               76   3e-12
ref|XP_002268382.1| PREDICTED: xylogalacturonan beta-1,3-xylosyl...    76   3e-12
emb|CAN68950.1| hypothetical protein VITISV_039537 [Vitis vinifera]    76   3e-12
ref|XP_003517832.1| PREDICTED: xylogalacturonan beta-1,3-xylosyl...    70   1e-10
ref|XP_002530948.1| catalytic, putative [Ricinus communis] gi|22...    66   3e-09

>emb|CBI31205.3| unnamed protein product [Vitis vinifera]
          Length = 455

 Score = 76.3 bits (186), Expect = 3e-12
 Identities = 49/123 (39%), Positives = 64/123 (52%)
 Frame = +1

Query: 28  MADRNTTHLVGSISRKXXXXXXXXXXXXXXXXXXXXXRSTGHPHFIDHSLLPNSKLFSVI 207
           MA+RN + L G ++R                      RSTG P FIDHSLLPNSKLF+V 
Sbjct: 1   MAERNASPL-GFVTRNSLLCLFSVASILFILSWLSVLRSTGRPRFIDHSLLPNSKLFAVT 59

Query: 208 ENNDSSQTLYDNDIQLSSLHNPSYKVDGREVYPQENPGVICKSSKVPLKVFMYDMPPEFH 387
           +N  +S++   NDI+ S        ++  E   +    V C S+   LKVFMYD+P EFH
Sbjct: 60  DNG-NSESQNQNDIEPS--------IESEEKALEGKNSVKCGSNYPVLKVFMYDLPAEFH 110

Query: 388 FAL 396
           F L
Sbjct: 111 FGL 113


>ref|XP_002268382.1| PREDICTED: xylogalacturonan beta-1,3-xylosyltransferase [Vitis
           vinifera]
          Length = 488

 Score = 76.3 bits (186), Expect = 3e-12
 Identities = 49/123 (39%), Positives = 64/123 (52%)
 Frame = +1

Query: 28  MADRNTTHLVGSISRKXXXXXXXXXXXXXXXXXXXXXRSTGHPHFIDHSLLPNSKLFSVI 207
           MA+RN + L G ++R                      RSTG P FIDHSLLPNSKLF+V 
Sbjct: 1   MAERNASPL-GFVTRNSLLCLFSVASILFILSWLSVLRSTGRPRFIDHSLLPNSKLFAVT 59

Query: 208 ENNDSSQTLYDNDIQLSSLHNPSYKVDGREVYPQENPGVICKSSKVPLKVFMYDMPPEFH 387
           +N  +S++   NDI+ S        ++  E   +    V C S+   LKVFMYD+P EFH
Sbjct: 60  DNG-NSESQNQNDIEPS--------IESEEKALEGKNSVKCGSNYPVLKVFMYDLPAEFH 110

Query: 388 FAL 396
           F L
Sbjct: 111 FGL 113


>emb|CAN68950.1| hypothetical protein VITISV_039537 [Vitis vinifera]
          Length = 488

 Score = 76.3 bits (186), Expect = 3e-12
 Identities = 49/123 (39%), Positives = 64/123 (52%)
 Frame = +1

Query: 28  MADRNTTHLVGSISRKXXXXXXXXXXXXXXXXXXXXXRSTGHPHFIDHSLLPNSKLFSVI 207
           MA+RN + L G ++R                      RSTG P FIDHSLLPNSKLF+V 
Sbjct: 1   MAERNASPL-GFVTRNSLLCLFSVASILFILSWLSVLRSTGRPRFIDHSLLPNSKLFAVT 59

Query: 208 ENNDSSQTLYDNDIQLSSLHNPSYKVDGREVYPQENPGVICKSSKVPLKVFMYDMPPEFH 387
           +N  +S++   NDI+ S        ++  E   +    V C S+   LKVFMYD+P EFH
Sbjct: 60  DNG-NSESQNQNDIEPS--------IESEEKALEGKNSVKCGSNYPVLKVFMYDLPAEFH 110

Query: 388 FAL 396
           F L
Sbjct: 111 FGL 113


>ref|XP_003517832.1| PREDICTED: xylogalacturonan beta-1,3-xylosyltransferase-like
           [Glycine max]
          Length = 509

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 48/137 (35%), Positives = 65/137 (47%), Gaps = 14/137 (10%)
 Frame = +1

Query: 28  MADRNTTHLVGSISRKXXXXXXXXXXXXXXXXXXXXXRSTGHPHFIDHSLLPNSKLFSVI 207
           MA+R     +  +SRK                     RST  PHFIDH+LLPNSKLFS +
Sbjct: 1   MAERIGASSLKVVSRKSLLFFFIMTSVLFIMSWFFVLRSTSRPHFIDHNLLPNSKLFSTL 60

Query: 208 ENNDSSQTLYDNDIQLSSLHNPSYKVDGREVYPQ-------------ENPGVIC-KSSKV 345
           + + S     + +   SS  N +  VD  +V                ++ G  C ++ +V
Sbjct: 61  DGSKSHMQKQNVE---SSFGNRAILVDSEDVEEASETKARNGKEKLVKHDGKKCNRNDEV 117

Query: 346 PLKVFMYDMPPEFHFAL 396
            LKVFMYD+PPEFHF L
Sbjct: 118 VLKVFMYDLPPEFHFGL 134


>ref|XP_002530948.1| catalytic, putative [Ricinus communis] gi|223529463|gb|EEF31420.1|
           catalytic, putative [Ricinus communis]
          Length = 512

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 52/134 (38%), Positives = 69/134 (51%), Gaps = 11/134 (8%)
 Frame = +1

Query: 28  MADRNTTHLVGSISRKXXXXXXXXXXXXXXXXXXXXXRSTGHPHFIDHSLLPNSKLFSVI 207
           MA+++++ LV  ISRK                     RSTG P+FID SL+ N+ L+S+I
Sbjct: 1   MAEKHSSSLV-VISRKSLFGLFSFVLVLFILSWFFVLRSTGRPNFIDGSLI-NNPLYSII 58

Query: 208 ENND------SSQTLYDN--DIQLSSLHNPSYKVDGREVY---PQENPGVICKSSKVPLK 354
           +N        S  TL D+  + Q  +   P  KVD ++V    P EN        K PLK
Sbjct: 59  DNGSDAPSIGSRATLADSRGEGQEEAEETPQEKVDVKDVKCNTPLEN-------RKEPLK 111

Query: 355 VFMYDMPPEFHFAL 396
           VFMYD+PPEFHF L
Sbjct: 112 VFMYDLPPEFHFEL 125


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