BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00038742
         (523 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002451896.1| hypothetical protein SORBIDRAFT_04g009491 [S...    70   4e-12
emb|CAN71467.1| hypothetical protein VITISV_038988 [Vitis vinifera]    66   3e-09
ref|XP_003588268.1| NADH-ubiquinone oxidoreductase chain [Medica...    52   1e-07

>ref|XP_002451896.1| hypothetical protein SORBIDRAFT_04g009491 [Sorghum bicolor]
           gi|241931727|gb|EES04872.1| hypothetical protein
           SORBIDRAFT_04g009491 [Sorghum bicolor]
          Length = 289

 Score = 69.7 bits (169), Expect(2) = 4e-12
 Identities = 28/30 (93%), Positives = 29/30 (96%)
 Frame = +3

Query: 114 YACIFRLDSRIFCFSGGGEQCCLRCGRCPP 203
           YAC+FRLDSRIFCFSGGGEQC LRCGRCPP
Sbjct: 239 YACLFRLDSRIFCFSGGGEQCSLRCGRCPP 268



 Score = 26.2 bits (56), Expect(2) = 4e-12
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = +2

Query: 86  RRPLSLDHYLCMY 124
           R PLSLDHY C++
Sbjct: 231 RGPLSLDHYACLF 243


>emb|CAN71467.1| hypothetical protein VITISV_038988 [Vitis vinifera]
          Length = 280

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 43/84 (51%), Positives = 46/84 (54%), Gaps = 8/84 (9%)
 Frame = +3

Query: 132 LDSRIFCFSGGGEQCCLRCGRCP-------PERTAH*LGGLVGGGPNRRKPCLSNHQ-RM 287
           LDSRIFCFSGGGEQC LRCGRCP       P R    L     GGP RR     NH  R 
Sbjct: 52  LDSRIFCFSGGGEQCSLRCGRCPPVGPGLLPARKNRSLASRTSGGPIRRH--TENHAFRT 109

Query: 288 SRV*R**LVSPVFKIKKNGLIGKK 359
            R  R      + K KKNGL+GK+
Sbjct: 110 ERNAR------LPKKKKNGLVGKR 127


>ref|XP_003588268.1| NADH-ubiquinone oxidoreductase chain [Medicago truncatula]
           gi|355477316|gb|AES58519.1| NADH-ubiquinone
           oxidoreductase chain [Medicago truncatula]
          Length = 556

 Score = 51.6 bits (122), Expect(2) = 1e-07
 Identities = 21/24 (87%), Positives = 23/24 (95%)
 Frame = -1

Query: 205 SGGHLPQRKQHCSPPPEKQKIRES 134
           +GGHLPQRK HCSPPP+KQKIRES
Sbjct: 294 TGGHLPQRKLHCSPPPDKQKIRES 317



 Score = 28.9 bits (63), Expect(2) = 1e-07
 Identities = 13/13 (100%), Positives = 13/13 (100%)
 Frame = -2

Query: 237 PLVRLASERFFRA 199
           PLVRLASERFFRA
Sbjct: 275 PLVRLASERFFRA 287