BLASTX nr result

ID: Coptis24_contig00038725 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00038725
         (460 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282986.1| PREDICTED: uncharacterized protein LOC100267...   119   2e-25
emb|CAN61027.1| hypothetical protein VITISV_001147 [Vitis vinifera]   119   2e-25
ref|XP_002510168.1| conserved hypothetical protein [Ricinus comm...   116   2e-24
ref|XP_004141390.1| PREDICTED: transcription factor LHW-like [Cu...    77   2e-12
ref|XP_003550324.1| PREDICTED: uncharacterized protein LOC100807...    63   2e-08

>ref|XP_002282986.1| PREDICTED: uncharacterized protein LOC100267842 [Vitis vinifera]
           gi|302142275|emb|CBI19478.3| unnamed protein product
           [Vitis vinifera]
          Length = 380

 Score =  119 bits (299), Expect = 2e-25
 Identities = 75/139 (53%), Positives = 92/139 (66%), Gaps = 9/139 (6%)
 Frame = +3

Query: 45  ETSFFVDEKRNIMGGKRCYGERLDETPSKSMNLGWNNPQTFSNNXXXXXXXFPFWSIPPL 224
           ETSF  +EK  + G KR Y +R  E P KS+NLGWN+PQ               WSIPPL
Sbjct: 220 ETSFSPEEKCQLAGAKRLYSDRPGEPPIKSINLGWNSPQNGVAGPA-------IWSIPPL 272

Query: 225 LPTMSCSLGALLSKLPSVIPSDNSTEAPDTTLDINN-----DSSSRRSKVDD-GGID--Q 380
           LPTMSCSLGALLSKLPSV+PS N  EA DTTL  NN     +S+S+R KV+  GG++  Q
Sbjct: 273 LPTMSCSLGALLSKLPSVLPSYNHIEAHDTTLLSNNSNSNINSTSQRLKVNGVGGLNEIQ 332

Query: 381 ISHIKLE-SCLGESFKDEK 434
           I+ IKLE SCL ++ ++EK
Sbjct: 333 IAGIKLESSCLMDTNQEEK 351


>emb|CAN61027.1| hypothetical protein VITISV_001147 [Vitis vinifera]
          Length = 387

 Score =  119 bits (299), Expect = 2e-25
 Identities = 75/139 (53%), Positives = 92/139 (66%), Gaps = 9/139 (6%)
 Frame = +3

Query: 45  ETSFFVDEKRNIMGGKRCYGERLDETPSKSMNLGWNNPQTFSNNXXXXXXXFPFWSIPPL 224
           ETSF  +EK  + G KR Y +R  E P KS+NLGWN+PQ               WSIPPL
Sbjct: 227 ETSFSPEEKCQLAGAKRLYSDRPGEPPIKSINLGWNSPQNGVAGPA-------IWSIPPL 279

Query: 225 LPTMSCSLGALLSKLPSVIPSDNSTEAPDTTLDINN-----DSSSRRSKVDD-GGID--Q 380
           LPTMSCSLGALLSKLPSV+PS N  EA DTTL  NN     +S+S+R KV+  GG++  Q
Sbjct: 280 LPTMSCSLGALLSKLPSVLPSYNHIEAHDTTLLSNNSNSNINSTSQRLKVNGVGGLNEIQ 339

Query: 381 ISHIKLE-SCLGESFKDEK 434
           I+ IKLE SCL ++ ++EK
Sbjct: 340 IAGIKLESSCLMDTNQEEK 358


>ref|XP_002510168.1| conserved hypothetical protein [Ricinus communis]
           gi|223550869|gb|EEF52355.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 369

 Score =  116 bits (291), Expect = 2e-24
 Identities = 73/145 (50%), Positives = 94/145 (64%), Gaps = 10/145 (6%)
 Frame = +3

Query: 3   QYPHTMKPNIQMIN--ETSFFVDE-KRNIMGGKRCYGERLDETPSKSMNLGWNNPQTFSN 173
           Q+P+ +KPN +M+   ET+F +D+ K  I+  KR + ER D+ P KS++LGWNNPQ    
Sbjct: 214 QHPYILKPNTRMVESQETTFSIDDNKHQIIREKRLFDERFDDNPIKSISLGWNNPQN--- 270

Query: 174 NXXXXXXXFPFWSIPPLLPTMSCSLGALLSKLPSVIPSD-NSTEAPDTTLDINNDSSSRR 350
                    P WSIP LLPTMSCSLGALLSKLPSV+PS   S EA DT L +N ++S+RR
Sbjct: 271 ----GIAGAPIWSIPTLLPTMSCSLGALLSKLPSVVPSSCGSIEAFDTAL-VNCNNSNRR 325

Query: 351 ---SKVDDGGIDQ---ISHIKLESC 407
              SKVD  G+ +    S+  LESC
Sbjct: 326 SQSSKVDTCGLAREVPPSNRNLESC 350


>ref|XP_004141390.1| PREDICTED: transcription factor LHW-like [Cucumis sativus]
           gi|449515101|ref|XP_004164588.1| PREDICTED:
           transcription factor LHW-like [Cucumis sativus]
          Length = 375

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 50/153 (32%), Positives = 74/153 (48%), Gaps = 10/153 (6%)
 Frame = +3

Query: 3   QYPHTMKPNIQMINETSFFVDEKRNIMGGKRCYGERLDETPSKSMNLGWNNPQTFSNNXX 182
           Q+P+ +KP++QMI   S          G KR +   LDE+P KS+NLGWN PQ       
Sbjct: 216 QHPYVLKPDVQMIENQS---------TGLKRLFSSMLDESPIKSINLGWNTPQ------H 260

Query: 183 XXXXXFPFWSIPPLLPTMSCSLGALLSKLPS-VIPSDNSTEAPDTT--LDINNDSSSRRS 353
                 P W IPPLLP+ SCSLG   S  PS   P     + PD    + IN+ + + ++
Sbjct: 261 SLTTGSPVWPIPPLLPSTSCSLGTFKSNFPSNSTPPCEVNDRPDPVQHMSINHPTPNTKA 320

Query: 354 KVDDGGIDQISHI-------KLESCLGESFKDE 431
              +  I+  + +       + ++CL  S + E
Sbjct: 321 SNSEVKIETSNKLDAAQETEEKQNCLNPSLRFE 353


>ref|XP_003550324.1| PREDICTED: uncharacterized protein LOC100807289 [Glycine max]
          Length = 204

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 40/107 (37%), Positives = 51/107 (47%), Gaps = 3/107 (2%)
 Frame = +3

Query: 3   QYPHTMKPNIQMINETSFFVDEKRNIMGGKRCYGERLDETPSKSM---NLGWNNPQTFSN 173
           Q+P   KPN+QM+      +          R  G   +++   SM   NLG N P     
Sbjct: 71  QHPCIAKPNLQMMESNEMTLSAYNATNQVTRVNGVHEEKSSFFSMISINLGRNPPP---Q 127

Query: 174 NXXXXXXXFPFWSIPPLLPTMSCSLGALLSKLPSVIPSDNSTEAPDT 314
           N        P WS PP LP MSCS GA+LSKLP V PS+N  +  +T
Sbjct: 128 NGTTTTQGSPLWSAPPSLPNMSCSFGAMLSKLPYVTPSNNPPQVLET 174


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