BLASTX nr result

ID: Coptis24_contig00038651 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00038651
         (331 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_001027693.3| zinc finger protein [Tetrahymena thermophila...    57   2e-06

>ref|XP_001027693.3| zinc finger protein [Tetrahymena thermophila]
           gi|225566843|gb|EAS07451.3| zinc finger protein
           [Tetrahymena thermophila SB210]
          Length = 243

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 25/54 (46%), Positives = 34/54 (62%), Gaps = 4/54 (7%)
 Frame = -2

Query: 321 CPLCYNGLLKEKRIERMPCKHLFHRRC----LGKSKTCPLCPDVQLDAVMQQVE 172
           C +CYNG  K + I+++PCKH+FH  C    L K KTCP C D   +++ QQ E
Sbjct: 122 CSICYNGFEKNEIIKKLPCKHIFHLSCIKPWLKKQKTCPNCRDDICESLKQQQE 175


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