BLASTX nr result

ID: Coptis24_contig00038620 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00038620
         (324 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002509597.1| Amine oxidase [copper-containing] precursor,...   136   2e-30
ref|XP_003635614.1| PREDICTED: primary amine oxidase-like, parti...   125   3e-27
ref|XP_004162660.1| PREDICTED: LOW QUALITY PROTEIN: primary amin...   120   2e-25
ref|XP_004147579.1| PREDICTED: primary amine oxidase-like [Cucum...   120   2e-25
ref|XP_002509596.1| Amine oxidase [copper-containing] precursor,...   111   7e-23

>ref|XP_002509597.1| Amine oxidase [copper-containing] precursor, putative [Ricinus
           communis] gi|223549496|gb|EEF50984.1| Amine oxidase
           [copper-containing] precursor, putative [Ricinus
           communis]
          Length = 718

 Score =  136 bits (342), Expect = 2e-30
 Identities = 66/107 (61%), Positives = 80/107 (74%)
 Frame = +2

Query: 2   TESPKHPLDPLTLQEITKVGTILSSYQPFSSTFPPIHSISLYEPEKSRVLNWKRGDPLLP 181
           TE+P HPLDPLT+QEI KV  ILSSYQPF   FP IHS+SL EP+KS VL WK GDP  P
Sbjct: 60  TETPHHPLDPLTVQEINKVKAILSSYQPFWYAFPAIHSLSLDEPDKSLVLEWKEGDPFPP 119

Query: 182 RQAFVIVYFEAKSNVLVVDLGSSQVLSHVVNPDSGYPILTAEDMAIA 322
           R+A VI  F  +S+VL VDL   QV++H +NP SGYP+L++ED + A
Sbjct: 120 RKALVIALFNGQSHVLAVDLDLCQVMNHEINPYSGYPMLSSEDTSAA 166


>ref|XP_003635614.1| PREDICTED: primary amine oxidase-like, partial [Vitis vinifera]
          Length = 447

 Score =  125 bits (315), Expect = 3e-27
 Identities = 62/106 (58%), Positives = 78/106 (73%)
 Frame = +2

Query: 5   ESPKHPLDPLTLQEITKVGTILSSYQPFSSTFPPIHSISLYEPEKSRVLNWKRGDPLLPR 184
           E+  HPLDPL++QEI KV  +LSSY PFSS+FP I S+SL EPEKS VL WK+GD L PR
Sbjct: 65  ETTHHPLDPLSIQEINKVRAVLSSYGPFSSSFPAIQSLSLDEPEKSVVLGWKKGDSLPPR 124

Query: 185 QAFVIVYFEAKSNVLVVDLGSSQVLSHVVNPDSGYPILTAEDMAIA 322
           +AFVI     K+ VL+VDL SS+V SH  +  SGYP L+ +D+ +A
Sbjct: 125 KAFVIALLNGKTQVLLVDLDSSRVTSHSTHQGSGYPTLSMDDIQVA 170


>ref|XP_004162660.1| PREDICTED: LOW QUALITY PROTEIN: primary amine oxidase-like [Cucumis
           sativus]
          Length = 661

 Score =  120 bits (300), Expect = 2e-25
 Identities = 58/107 (54%), Positives = 80/107 (74%)
 Frame = +2

Query: 2   TESPKHPLDPLTLQEITKVGTILSSYQPFSSTFPPIHSISLYEPEKSRVLNWKRGDPLLP 181
           +++P HPLDPLT+QEI KV  ILSSY+PFS++FP IHS++L EP+KS VL+W+ G+PL P
Sbjct: 2   SKAPHHPLDPLTVQEINKVRDILSSYEPFSNSFPTIHSLALEEPDKSLVLSWEFGNPLPP 61

Query: 182 RQAFVIVYFEAKSNVLVVDLGSSQVLSHVVNPDSGYPILTAEDMAIA 322
           R+A VI     + +VL VDL   +V+ H  NP SGYP++T E++  A
Sbjct: 62  RRAAVIGILYEQVHVLSVDLELHRVIRHTANPTSGYPMITMEELLSA 108


>ref|XP_004147579.1| PREDICTED: primary amine oxidase-like [Cucumis sativus]
          Length = 710

 Score =  120 bits (300), Expect = 2e-25
 Identities = 58/107 (54%), Positives = 80/107 (74%)
 Frame = +2

Query: 2   TESPKHPLDPLTLQEITKVGTILSSYQPFSSTFPPIHSISLYEPEKSRVLNWKRGDPLLP 181
           +++P HPLDPLT+QEI KV  ILSSY+PFS++FP IHS++L EP+KS VL+W+ G+PL P
Sbjct: 51  SKAPHHPLDPLTVQEINKVRDILSSYEPFSNSFPTIHSLALEEPDKSLVLSWEFGNPLPP 110

Query: 182 RQAFVIVYFEAKSNVLVVDLGSSQVLSHVVNPDSGYPILTAEDMAIA 322
           R+A VI     + +VL VDL   +V+ H  NP SGYP++T E++  A
Sbjct: 111 RRAAVIGILYEQVHVLSVDLELHRVIRHTANPTSGYPMITMEELLSA 157


>ref|XP_002509596.1| Amine oxidase [copper-containing] precursor, putative [Ricinus
           communis] gi|223549495|gb|EEF50983.1| Amine oxidase
           [copper-containing] precursor, putative [Ricinus
           communis]
          Length = 730

 Score =  111 bits (277), Expect = 7e-23
 Identities = 55/107 (51%), Positives = 72/107 (67%)
 Frame = +2

Query: 2   TESPKHPLDPLTLQEITKVGTILSSYQPFSSTFPPIHSISLYEPEKSRVLNWKRGDPLLP 181
           ++ P HPLDPLT+QE  KV TIL S+  F S+   +HS+ L EPEK+ VL W++GDP+LP
Sbjct: 74  SDLPTHPLDPLTIQEFNKVRTILKSHDLFKSSPFSLHSVVLEEPEKTLVLKWRKGDPMLP 133

Query: 182 RQAFVIVYFEAKSNVLVVDLGSSQVLSHVVNPDSGYPILTAEDMAIA 322
           R+A VI     +S+VL VD+ +S V     NP SGYP +T EDM  A
Sbjct: 134 RKAEVIARVNGQSHVLTVDINTSDVAVQETNPLSGYPTMTIEDMTTA 180


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