BLASTX nr result
ID: Coptis24_contig00038619
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00038619 (215 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002517213.1| chloride channel clc, putative [Ricinus comm... 56 3e-06 emb|CBI26223.3| unnamed protein product [Vitis vinifera] 54 1e-05 ref|XP_002281606.1| PREDICTED: chloride channel protein CLC-d [V... 54 1e-05 >ref|XP_002517213.1| chloride channel clc, putative [Ricinus communis] gi|223543848|gb|EEF45376.1| chloride channel clc, putative [Ricinus communis] Length = 794 Score = 56.2 bits (134), Expect = 3e-06 Identities = 33/71 (46%), Positives = 37/71 (52%) Frame = -3 Query: 213 KVVSFPHVVKVADLVSILRNNKHNGFPMSFASSLVSHHKKTSFMLFCNACFMFACFQVVD 34 KVVSFP V KVAD+VSILR+NKHNGFP V+D Sbjct: 587 KVVSFPRVAKVADVVSILRSNKHNGFP------------------------------VID 616 Query: 33 HGQNGEALVIG 1 H +NGE LVIG Sbjct: 617 HTRNGETLVIG 627 >emb|CBI26223.3| unnamed protein product [Vitis vinifera] Length = 800 Score = 54.3 bits (129), Expect = 1e-05 Identities = 32/71 (45%), Positives = 38/71 (53%) Frame = -3 Query: 213 KVVSFPHVVKVADLVSILRNNKHNGFPMSFASSLVSHHKKTSFMLFCNACFMFACFQVVD 34 KVV FP VVKVAD+VSILR+N+HNGFP V+D Sbjct: 593 KVVYFPRVVKVADVVSILRSNEHNGFP------------------------------VID 622 Query: 33 HGQNGEALVIG 1 H +NGE+LVIG Sbjct: 623 HTRNGESLVIG 633 >ref|XP_002281606.1| PREDICTED: chloride channel protein CLC-d [Vitis vinifera] gi|301318138|gb|ADK66984.1| chloride channel ClC6 [Vitis vinifera] Length = 771 Score = 54.3 bits (129), Expect = 1e-05 Identities = 32/71 (45%), Positives = 38/71 (53%) Frame = -3 Query: 213 KVVSFPHVVKVADLVSILRNNKHNGFPMSFASSLVSHHKKTSFMLFCNACFMFACFQVVD 34 KVV FP VVKVAD+VSILR+N+HNGFP V+D Sbjct: 593 KVVYFPRVVKVADVVSILRSNEHNGFP------------------------------VID 622 Query: 33 HGQNGEALVIG 1 H +NGE+LVIG Sbjct: 623 HTRNGESLVIG 633