BLASTX nr result

ID: Coptis24_contig00038448 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00038448
         (287 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631342.1| PREDICTED: inactive leucine-rich repeat rece...   182   3e-44
emb|CAN80935.1| hypothetical protein VITISV_005661 [Vitis vinifera]   181   7e-44
ref|XP_004156151.1| PREDICTED: inactive leucine-rich repeat rece...   170   1e-40
ref|XP_004142286.1| PREDICTED: inactive leucine-rich repeat rece...   170   1e-40
ref|XP_002518813.1| receptor-kinase, putative [Ricinus communis]...   170   1e-40

>ref|XP_003631342.1| PREDICTED: inactive leucine-rich repeat receptor-like
           serine/threonine-protein kinase At1g60630-like [Vitis
           vinifera]
          Length = 662

 Score =  182 bits (462), Expect = 3e-44
 Identities = 88/95 (92%), Positives = 93/95 (97%)
 Frame = -3

Query: 285 SWEGEGLGSLVFCGPGDQQMSYSLEDLLKASAETLGRGTMGSTYKAVMESGFIVTVKRLK 106
           SWEGEGLGSLVFCGPGDQQMSYSLEDLLKASAETLGRGTMGSTYKAVMESGFIVTVKRLK
Sbjct: 329 SWEGEGLGSLVFCGPGDQQMSYSLEDLLKASAETLGRGTMGSTYKAVMESGFIVTVKRLK 388

Query: 105 DSRYPRLDEFRKQMLVIGKLRHPNLVPLRAYFQAK 1
           D+RYPRL+EFR QM ++G+LRHPNLVPLRAYFQAK
Sbjct: 389 DARYPRLEEFRAQMELLGRLRHPNLVPLRAYFQAK 423


>emb|CAN80935.1| hypothetical protein VITISV_005661 [Vitis vinifera]
          Length = 695

 Score =  181 bits (458), Expect = 7e-44
 Identities = 87/95 (91%), Positives = 93/95 (97%)
 Frame = -3

Query: 285 SWEGEGLGSLVFCGPGDQQMSYSLEDLLKASAETLGRGTMGSTYKAVMESGFIVTVKRLK 106
           SWEGEGLGSLVFCGPGDQQMSYSLEDLLKASAETLGRGTMGSTYKAVMESGFIVTVKRLK
Sbjct: 320 SWEGEGLGSLVFCGPGDQQMSYSLEDLLKASAETLGRGTMGSTYKAVMESGFIVTVKRLK 379

Query: 105 DSRYPRLDEFRKQMLVIGKLRHPNLVPLRAYFQAK 1
           D+RYPRL+EFR QM ++G+LRHPNLVPLRA+FQAK
Sbjct: 380 DARYPRLEEFRAQMELLGRLRHPNLVPLRAFFQAK 414


>ref|XP_004156151.1| PREDICTED: inactive leucine-rich repeat receptor-like
           serine/threonine-protein kinase At1g60630-like [Cucumis
           sativus]
          Length = 765

 Score =  170 bits (431), Expect = 1e-40
 Identities = 82/95 (86%), Positives = 90/95 (94%)
 Frame = -3

Query: 285 SWEGEGLGSLVFCGPGDQQMSYSLEDLLKASAETLGRGTMGSTYKAVMESGFIVTVKRLK 106
           SWE EGLGSLVFCG GDQ+M+YSLEDLLKASAETLGRGT+GSTYKAVMESG+IVTVKRLK
Sbjct: 432 SWESEGLGSLVFCGAGDQKMTYSLEDLLKASAETLGRGTIGSTYKAVMESGYIVTVKRLK 491

Query: 105 DSRYPRLDEFRKQMLVIGKLRHPNLVPLRAYFQAK 1
           DSRYPR +EF +QM V+G+LRHPNLVPLRAYFQAK
Sbjct: 492 DSRYPRAEEFGRQMEVLGRLRHPNLVPLRAYFQAK 526


>ref|XP_004142286.1| PREDICTED: inactive leucine-rich repeat receptor-like
           serine/threonine-protein kinase At1g60630-like [Cucumis
           sativus]
          Length = 660

 Score =  170 bits (431), Expect = 1e-40
 Identities = 82/95 (86%), Positives = 90/95 (94%)
 Frame = -3

Query: 285 SWEGEGLGSLVFCGPGDQQMSYSLEDLLKASAETLGRGTMGSTYKAVMESGFIVTVKRLK 106
           SWE EGLGSLVFCG GDQ+M+YSLEDLLKASAETLGRGT+GSTYKAVMESG+IVTVKRLK
Sbjct: 327 SWESEGLGSLVFCGAGDQKMTYSLEDLLKASAETLGRGTIGSTYKAVMESGYIVTVKRLK 386

Query: 105 DSRYPRLDEFRKQMLVIGKLRHPNLVPLRAYFQAK 1
           DSRYPR +EF +QM V+G+LRHPNLVPLRAYFQAK
Sbjct: 387 DSRYPRAEEFGRQMEVLGRLRHPNLVPLRAYFQAK 421


>ref|XP_002518813.1| receptor-kinase, putative [Ricinus communis]
           gi|223542194|gb|EEF43738.1| receptor-kinase, putative
           [Ricinus communis]
          Length = 663

 Score =  170 bits (431), Expect = 1e-40
 Identities = 82/95 (86%), Positives = 91/95 (95%)
 Frame = -3

Query: 285 SWEGEGLGSLVFCGPGDQQMSYSLEDLLKASAETLGRGTMGSTYKAVMESGFIVTVKRLK 106
           SWEGEGLG+LVF G GDQQMSYSLEDLLKASAETLGRG+MGSTYKAVMESGFIVTVKRLK
Sbjct: 330 SWEGEGLGTLVFLGAGDQQMSYSLEDLLKASAETLGRGSMGSTYKAVMESGFIVTVKRLK 389

Query: 105 DSRYPRLDEFRKQMLVIGKLRHPNLVPLRAYFQAK 1
           D+RYPR++EFR+ M ++G+LRHPNLVPLRAYFQAK
Sbjct: 390 DARYPRVEEFRRHMDLLGRLRHPNLVPLRAYFQAK 424


Top