BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00038338
         (497 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15227.3| unnamed protein product [Vitis vinifera]              265   3e-69
ref|XP_002282084.1| PREDICTED: pentatricopeptide repeat-containi...   265   3e-69
ref|XP_004137583.1| PREDICTED: pentatricopeptide repeat-containi...   261   4e-68
ref|XP_002328557.1| predicted protein [Populus trichocarpa] gi|2...   251   3e-65
ref|XP_003550780.1| PREDICTED: pentatricopeptide repeat-containi...   246   2e-63

>emb|CBI15227.3| unnamed protein product [Vitis vinifera]
          Length = 491

 Score =  265 bits (677), Expect = 3e-69
 Identities = 124/165 (75%), Positives = 146/165 (88%)
 Frame = -2

Query: 496 IEHYGCMVDLYGRAGLLSKAYDFVTEMPIKPNDIIWRTLLGACSIHGDIKLAEQVKEQLS 317
           IEHYGCMVDLYGRAG L KAY+F+  MP+ P  IIWRTLLGACSIHG++KLAE+VKE+LS
Sbjct: 243 IEHYGCMVDLYGRAGQLDKAYEFIIHMPVLPTAIIWRTLLGACSIHGNVKLAERVKERLS 302

Query: 316 ELDPNNSGDHVLLSNVYAVAGKWRDVAYVRKSMNDRRIKKSPGWSIIEVDKVMYSFVMGE 137
           ELDPNNSGDHVLLSN+YAVAGKW+DVA VR+SM D+R+ K+PGWS+IEVDK+MYSFV GE
Sbjct: 303 ELDPNNSGDHVLLSNIYAVAGKWKDVAAVRRSMTDQRMNKTPGWSMIEVDKIMYSFVAGE 362

Query: 136 GLNGVTHEANEKLVEIMSRIRIEGGYIPEVGSVLHDIEEEEKENA 2
             N +T EA EKL EIM ++R+EG YIPEVGSVLHDIE+EEKE++
Sbjct: 363 VQNSITEEAYEKLKEIMLKLRVEGCYIPEVGSVLHDIEDEEKEDS 407


>ref|XP_002282084.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g74630-like [Vitis vinifera]
          Length = 643

 Score =  265 bits (677), Expect = 3e-69
 Identities = 124/165 (75%), Positives = 146/165 (88%)
 Frame = -2

Query: 496 IEHYGCMVDLYGRAGLLSKAYDFVTEMPIKPNDIIWRTLLGACSIHGDIKLAEQVKEQLS 317
           IEHYGCMVDLYGRAG L KAY+F+  MP+ P  IIWRTLLGACSIHG++KLAE+VKE+LS
Sbjct: 407 IEHYGCMVDLYGRAGQLDKAYEFIIHMPVLPTAIIWRTLLGACSIHGNVKLAERVKERLS 466

Query: 316 ELDPNNSGDHVLLSNVYAVAGKWRDVAYVRKSMNDRRIKKSPGWSIIEVDKVMYSFVMGE 137
           ELDPNNSGDHVLLSN+YAVAGKW+DVA VR+SM D+R+ K+PGWS+IEVDK+MYSFV GE
Sbjct: 467 ELDPNNSGDHVLLSNIYAVAGKWKDVAAVRRSMTDQRMNKTPGWSMIEVDKIMYSFVAGE 526

Query: 136 GLNGVTHEANEKLVEIMSRIRIEGGYIPEVGSVLHDIEEEEKENA 2
             N +T EA EKL EIM ++R+EG YIPEVGSVLHDIE+EEKE++
Sbjct: 527 VQNSITEEAYEKLKEIMLKLRVEGCYIPEVGSVLHDIEDEEKEDS 571


>ref|XP_004137583.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g74630-like [Cucumis sativus]
           gi|449487109|ref|XP_004157499.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g74630-like [Cucumis sativus]
          Length = 642

 Score =  261 bits (667), Expect = 4e-68
 Identities = 122/165 (73%), Positives = 146/165 (88%)
 Frame = -2

Query: 496 IEHYGCMVDLYGRAGLLSKAYDFVTEMPIKPNDIIWRTLLGACSIHGDIKLAEQVKEQLS 317
           IEHYGCMVDLYGRAG L +AYDFV +MPI PNDI+WRTLLGACSIHG++ LA QVK QLS
Sbjct: 406 IEHYGCMVDLYGRAGKLQQAYDFVCQMPISPNDIVWRTLLGACSIHGNLYLAGQVKRQLS 465

Query: 316 ELDPNNSGDHVLLSNVYAVAGKWRDVAYVRKSMNDRRIKKSPGWSIIEVDKVMYSFVMGE 137
           ELDP NSGDHVLLSN+YAVAGKW+DVA +R+SM  +R+KK+PGWS+IEV++++YSFV GE
Sbjct: 466 ELDPENSGDHVLLSNIYAVAGKWKDVAALRRSMTHQRLKKTPGWSMIEVNRIIYSFVAGE 525

Query: 136 GLNGVTHEANEKLVEIMSRIRIEGGYIPEVGSVLHDIEEEEKENA 2
             N +  EA++KL EIMSR+RIEGGY+PEVGSVLHDIE EEKE++
Sbjct: 526 KQNDIAVEAHQKLREIMSRLRIEGGYVPEVGSVLHDIEVEEKEDS 570


>ref|XP_002328557.1| predicted protein [Populus trichocarpa] gi|222838272|gb|EEE76637.1|
           predicted protein [Populus trichocarpa]
          Length = 643

 Score =  251 bits (642), Expect = 3e-65
 Identities = 118/165 (71%), Positives = 140/165 (84%)
 Frame = -2

Query: 496 IEHYGCMVDLYGRAGLLSKAYDFVTEMPIKPNDIIWRTLLGACSIHGDIKLAEQVKEQLS 317
           IEHYGCMVDLYGRAG L KAY+FV +MPI    IIWRTLLGACS+HGD+KLAEQVKE+LS
Sbjct: 407 IEHYGCMVDLYGRAGQLQKAYEFVCQMPIPCTAIIWRTLLGACSMHGDVKLAEQVKERLS 466

Query: 316 ELDPNNSGDHVLLSNVYAVAGKWRDVAYVRKSMNDRRIKKSPGWSIIEVDKVMYSFVMGE 137
           ELDPNNS DHVLLSN YAVAGKW+D A VR+SM ++RI K+PGWS+IEVDK+MY+F+ G 
Sbjct: 467 ELDPNNSSDHVLLSNAYAVAGKWKDAASVRRSMTEQRITKTPGWSMIEVDKIMYTFLAGT 526

Query: 136 GLNGVTHEANEKLVEIMSRIRIEGGYIPEVGSVLHDIEEEEKENA 2
               +T EA +KL EI+ R+R+EGGY+PE+G VLHDIEEEEKE +
Sbjct: 527 KQYKITEEAYKKLKEIIRRLRVEGGYVPEIGRVLHDIEEEEKEGS 571


>ref|XP_003550780.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g74630-like [Glycine max]
          Length = 640

 Score =  246 bits (627), Expect = 2e-63
 Identities = 114/165 (69%), Positives = 141/165 (85%)
 Frame = -2

Query: 496 IEHYGCMVDLYGRAGLLSKAYDFVTEMPIKPNDIIWRTLLGACSIHGDIKLAEQVKEQLS 317
           IEHYGCMVDLYGRA  L KAY+F+ EMP+ PN IIWRTLLGACSIHG+I++AE VK +L+
Sbjct: 404 IEHYGCMVDLYGRAARLQKAYEFICEMPVSPNAIIWRTLLGACSIHGNIEMAELVKARLA 463

Query: 316 ELDPNNSGDHVLLSNVYAVAGKWRDVAYVRKSMNDRRIKKSPGWSIIEVDKVMYSFVMGE 137
           E+DP+NSGDHVLLSNVYAVAGKW+DV+ +R++M +  +KK+PGWS+IE+DKV+Y FV GE
Sbjct: 464 EMDPDNSGDHVLLSNVYAVAGKWKDVSSIRRTMTEHSMKKTPGWSMIEIDKVIYGFVAGE 523

Query: 136 GLNGVTHEANEKLVEIMSRIRIEGGYIPEVGSVLHDIEEEEKENA 2
             N VT EA+EKL EIM R+R E GY P++ SVLHDIEEEEKE++
Sbjct: 524 KPNEVTEEAHEKLREIMLRLRTEAGYAPQLRSVLHDIEEEEKEDS 568