BLASTX nr result

ID: Coptis24_contig00038221 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00038221
         (277 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003518531.1| PREDICTED: uncharacterized protein At4g26485...    93   3e-17
ref|XP_003617633.1| hypothetical protein MTR_5g093740 [Medicago ...    76   2e-12
ref|XP_002332190.1| predicted protein [Populus trichocarpa] gi|2...    75   4e-12
ref|XP_002523255.1| hypothetical protein RCOM_0648620 [Ricinus c...    71   8e-11
emb|CAJ19330.1| hypothetical protein [Triticum aestivum]               70   2e-10

>ref|XP_003518531.1| PREDICTED: uncharacterized protein At4g26485-like [Glycine max]
          Length = 263

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 45/75 (60%), Positives = 54/75 (72%)
 Frame = -3

Query: 275 SLDNKAMVLDKHSTAKANLETLHMLDCTIGHKVDAHSMRKHPLLKTRRFDRIVFNFPHAG 96
           SLD+K  V+ K+S A  NL  L  L CTI H+VD H+M KHPLL+ + FDRIVFNFPHAG
Sbjct: 43  SLDSKVTVIGKYSRASTNLNELENLGCTIVHEVDVHTMNKHPLLQRKYFDRIVFNFPHAG 102

Query: 95  FLYRVRGEHDEYQIQ 51
           F+YR   EHD  QI+
Sbjct: 103 FVYR---EHDSCQIE 114


>ref|XP_003617633.1| hypothetical protein MTR_5g093740 [Medicago truncatula]
           gi|355518968|gb|AET00592.1| hypothetical protein
           MTR_5g093740 [Medicago truncatula]
          Length = 525

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 33/61 (54%), Positives = 45/61 (73%)
 Frame = -3

Query: 275 SLDNKAMVLDKHSTAKANLETLHMLDCTIGHKVDAHSMRKHPLLKTRRFDRIVFNFPHAG 96
           S D+K  ++ K+S A  NLE L    C+I H+VDAHS+ KHP+L+ + FDR+V+NFPHAG
Sbjct: 43  SRDSKGSLIMKYSRASTNLEELEKFGCSIVHEVDAHSVHKHPMLQNKIFDRVVYNFPHAG 102

Query: 95  F 93
           F
Sbjct: 103 F 103


>ref|XP_002332190.1| predicted protein [Populus trichocarpa] gi|222875297|gb|EEF12428.1|
           predicted protein [Populus trichocarpa]
          Length = 301

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 40/70 (57%), Positives = 49/70 (70%)
 Frame = -3

Query: 275 SLDNKAMVLDKHSTAKANLETLHMLDCTIGHKVDAHSMRKHPLLKTRRFDRIVFNFPHAG 96
           SLD+K  ++  +S A  NL+ L  L CTI H+V+AH+M  HPLL  + FDRIVFNFPHAG
Sbjct: 177 SLDSKECLVATYSRAAENLKKLKDLGCTILHEVNAHTMGCHPLLHEQWFDRIVFNFPHAG 236

Query: 95  FLYRVRGEHD 66
           F Y  R EHD
Sbjct: 237 FHYLYR-EHD 245


>ref|XP_002523255.1| hypothetical protein RCOM_0648620 [Ricinus communis]
           gi|223537468|gb|EEF39094.1| hypothetical protein
           RCOM_0648620 [Ricinus communis]
          Length = 170

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 38/75 (50%), Positives = 50/75 (66%)
 Frame = -3

Query: 275 SLDNKAMVLDKHSTAKANLETLHMLDCTIGHKVDAHSMRKHPLLKTRRFDRIVFNFPHAG 96
           SLD+K  ++ K+S A+ +L+ L  L C I HKVDA +M +H LL    FDRIVFNFPHA 
Sbjct: 5   SLDSKGELIIKYSRAEMHLKELQDLGCRIIHKVDASTMSQHSLLAHTTFDRIVFNFPHAS 64

Query: 95  FLYRVRGEHDEYQIQ 51
             +R   EHD+ QI+
Sbjct: 65  LKWR---EHDKKQIE 76


>emb|CAJ19330.1| hypothetical protein [Triticum aestivum]
          Length = 594

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 34/61 (55%), Positives = 42/61 (68%)
 Frame = -3

Query: 275 SLDNKAMVLDKHSTAKANLETLHMLDCTIGHKVDAHSMRKHPLLKTRRFDRIVFNFPHAG 96
           SLD+   +  K+  A+AN+  L  LDCT+ H VDA  M+ +P LK RRFDRIV NFPHAG
Sbjct: 209 SLDSYDALKRKYGNAEANITELKRLDCTVLHGVDAKLMKLYPSLKMRRFDRIVLNFPHAG 268

Query: 95  F 93
           F
Sbjct: 269 F 269


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