BLASTX nr result

ID: Coptis24_contig00038055 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00038055
         (261 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282967.2| PREDICTED: zinc finger CCCH domain-containin...   110   1e-22
emb|CBI26957.3| unnamed protein product [Vitis vinifera]              110   1e-22
ref|NP_176987.1| zinc finger CCCH domain-containing protein 15 [...   109   3e-22
ref|XP_002887169.1| zinc finger (CCCH-type) family protein [Arab...   109   3e-22
ref|NP_001077792.1| zinc finger CCCH domain-containing protein 1...   109   3e-22

>ref|XP_002282967.2| PREDICTED: zinc finger CCCH domain-containing protein 15 [Vitis
           vinifera]
          Length = 396

 Score =  110 bits (275), Expect = 1e-22
 Identities = 48/53 (90%), Positives = 49/53 (92%)
 Frame = +1

Query: 1   CQFAHGINELRPVIRHPRYKTEVCRMVLAGENCPYGHRCHFRHALTEQERLTG 159
           CQFAHGI ELRPVIRHPRYKTEVCRMVLAG+ CPYGHRCHFRHALTEQER  G
Sbjct: 333 CQFAHGIEELRPVIRHPRYKTEVCRMVLAGDACPYGHRCHFRHALTEQERFMG 385


>emb|CBI26957.3| unnamed protein product [Vitis vinifera]
          Length = 398

 Score =  110 bits (275), Expect = 1e-22
 Identities = 48/53 (90%), Positives = 49/53 (92%)
 Frame = +1

Query: 1   CQFAHGINELRPVIRHPRYKTEVCRMVLAGENCPYGHRCHFRHALTEQERLTG 159
           CQFAHGI ELRPVIRHPRYKTEVCRMVLAG+ CPYGHRCHFRHALTEQER  G
Sbjct: 335 CQFAHGIEELRPVIRHPRYKTEVCRMVLAGDACPYGHRCHFRHALTEQERFMG 387


>ref|NP_176987.1| zinc finger CCCH domain-containing protein 15 [Arabidopsis
           thaliana] gi|75333565|sp|Q9C9F5.1|C3H15_ARATH RecName:
           Full=Zinc finger CCCH domain-containing protein 15;
           Short=AtC3H15 gi|12325330|gb|AAG52611.1|AC016447_20
           putative zinc finger protein; 81747-79917 [Arabidopsis
           thaliana] gi|67633492|gb|AAY78670.1| zinc finger
           (CCCH-type) family protein [Arabidopsis thaliana]
           gi|109946509|gb|ABG48433.1| At1g68200 [Arabidopsis
           thaliana] gi|332196642|gb|AEE34763.1| zinc finger CCCH
           domain-containing protein 15 [Arabidopsis thaliana]
          Length = 308

 Score =  109 bits (272), Expect = 3e-22
 Identities = 46/51 (90%), Positives = 50/51 (98%)
 Frame = +1

Query: 1   CQFAHGINELRPVIRHPRYKTEVCRMVLAGENCPYGHRCHFRHALTEQERL 153
           CQFAHGI ELRPVIRHPRYKTEVCRMVLAG+NCPYGHRCHFRH+L+EQE+L
Sbjct: 243 CQFAHGIKELRPVIRHPRYKTEVCRMVLAGDNCPYGHRCHFRHSLSEQEKL 293


>ref|XP_002887169.1| zinc finger (CCCH-type) family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297333010|gb|EFH63428.1| zinc finger
           (CCCH-type) family protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 310

 Score =  109 bits (272), Expect = 3e-22
 Identities = 46/51 (90%), Positives = 50/51 (98%)
 Frame = +1

Query: 1   CQFAHGINELRPVIRHPRYKTEVCRMVLAGENCPYGHRCHFRHALTEQERL 153
           CQFAHGI ELRPVIRHPRYKTEVCRMVLAG+NCPYGHRCHFRH+L+EQE+L
Sbjct: 245 CQFAHGIKELRPVIRHPRYKTEVCRMVLAGDNCPYGHRCHFRHSLSEQEKL 295


>ref|NP_001077792.1| zinc finger CCCH domain-containing protein 15 [Arabidopsis
           thaliana] gi|91806051|gb|ABE65754.1| zinc finger family
           protein [Arabidopsis thaliana]
           gi|332196643|gb|AEE34764.1| zinc finger CCCH
           domain-containing protein 15 [Arabidopsis thaliana]
          Length = 307

 Score =  109 bits (272), Expect = 3e-22
 Identities = 46/51 (90%), Positives = 50/51 (98%)
 Frame = +1

Query: 1   CQFAHGINELRPVIRHPRYKTEVCRMVLAGENCPYGHRCHFRHALTEQERL 153
           CQFAHGI ELRPVIRHPRYKTEVCRMVLAG+NCPYGHRCHFRH+L+EQE+L
Sbjct: 242 CQFAHGIKELRPVIRHPRYKTEVCRMVLAGDNCPYGHRCHFRHSLSEQEKL 292


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