BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00038000
         (366 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA65995.1| hypothetical protein [Beta vulgaris subsp. vulga...    92   4e-17
gb|ABD64923.1| hypothetical protein 24.t00067 [Brassica oleracea]      86   3e-15
dbj|BAF01759.1| putative non-LTR retroelement reverse transcript...    86   3e-15
gb|AAD17398.1| putative non-LTR retroelement reverse transcripta...    86   3e-15
emb|CCA66020.1| hypothetical protein [Beta vulgaris subsp. vulga...    83   3e-14

>emb|CCA65995.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1389

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 45/94 (47%), Positives = 64/94 (68%)
 Frame = -1

Query: 366 ADNYDATREVTIEEI*DALFSMDPHKASGPDGFTPLFYQKYWDGIIHLNLLHMVKSFMNS 187
           ADN   T  V+ EEI +A+F + P K+ GPDGF P F+QKYW  +I  ++   V++F +S
Sbjct: 435 ADNAYLTSAVSPEEIKNAVFDLAPDKSPGPDGFPPYFFQKYWT-LIGKSVCRAVQAFFHS 493

Query: 186 DHLLRELNHTNITLIPKIQGLENLNQFRPISLCN 85
            ++L+E+NHT + LIPK+    N N FRPISLC+
Sbjct: 494 GYMLKEVNHTFLALIPKVDKPVNANHFRPISLCS 527


>gb|ABD64923.1| hypothetical protein 24.t00067 [Brassica oleracea]
          Length = 381

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 46/116 (39%), Positives = 68/116 (58%)
 Frame = -1

Query: 348 TREVTIEEI*DALFSMDPHKASGPDGFTPLFYQKYWDGIIHLNLLHMVKSFMNSDHLLRE 169
           +R+VT EE+  ++FS+   +A GPDG T  FYQ YWD I+   ++  V+ F N+     +
Sbjct: 227 SRDVTAEEVRISVFSIGATRAPGPDGLTASFYQTYWD-IVGPAVVEEVRHFFNTGEFYSD 285

Query: 168 LNHTNITLIPKIQGLENLNQFRPISLCNVPSQTDS*VKWLSLSPQIEFLIIQLYGG 1
           LNHTN+ LIPKI     +  FRPI+LCNV  +  S +  L +   + F+I +   G
Sbjct: 286 LNHTNLCLIPKITNPITMKDFRPIALCNVMYKIISKILSLCMKSILHFVISENQSG 341


>dbj|BAF01759.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 400

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 49/117 (41%), Positives = 72/117 (61%)
 Frame = -1

Query: 360 NYDATREVTIEEI*DALFSMDPHKASGPDGFTPLFYQKYWDGIIHLNLLHMVKSFMNSDH 181
           N   T+ ++ EE+  ALFS++P KA GPDG T  FYQ YWD +   +L+ +V++F ++  
Sbjct: 2   NKSLTKVISPEEVKRALFSLNPDKAPGPDGMTAFFYQHYWD-LTGPDLIKLVQNFHSTGF 60

Query: 180 LLRELNHTNITLIPKIQGLENLNQFRPISLCNVPSQTDS*VKWLSLSPQIEFLIIQL 10
               LN TNI LIPK +    + +FRPISLCNV  +  S V    LS +++ L+ +L
Sbjct: 61  FDERLNETNICLIPKTERPRKMAEFRPISLCNVSYKVISKV----LSSRLKRLLPEL 113


>gb|AAD17398.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1225

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 49/117 (41%), Positives = 72/117 (61%)
 Frame = -1

Query: 360 NYDATREVTIEEI*DALFSMDPHKASGPDGFTPLFYQKYWDGIIHLNLLHMVKSFMNSDH 181
           N   T+ ++ EE+  ALFS++P KA GPDG T  FYQ YWD +   +L+ +V++F ++  
Sbjct: 368 NKSLTKVISPEEVKRALFSLNPDKAPGPDGMTAFFYQHYWD-LTGPDLIKLVQNFHSTGF 426

Query: 180 LLRELNHTNITLIPKIQGLENLNQFRPISLCNVPSQTDS*VKWLSLSPQIEFLIIQL 10
               LN TNI LIPK +    + +FRPISLCNV  +  S V    LS +++ L+ +L
Sbjct: 427 FDERLNETNICLIPKTERPRKMAEFRPISLCNVSYKVISKV----LSSRLKRLLPEL 479


>emb|CCA66020.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1365

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 42/91 (46%), Positives = 57/91 (62%)
 Frame = -1

Query: 354 DATREVTIEEI*DALFSMDPHKASGPDGFTPLFYQKYWDGIIHLNLLHMVKSFMNSDHLL 175
           D  + VT EE+ + +F M   KA GPDG   +FYQK+W  I+  ++   V  F  + ++L
Sbjct: 436 DLIKPVTREEVRNVVFQMGSLKAPGPDGIPAIFYQKHWS-IVGEDIWRAVSHFFTTGYIL 494

Query: 174 RELNHTNITLIPKIQGLENLNQFRPISLCNV 82
           +E N TNI LIPK++  E   QFRPISLCNV
Sbjct: 495 QEWNQTNICLIPKVERPEQACQFRPISLCNV 525