BLASTX nr result

ID: Coptis24_contig00037973 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00037973
         (311 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001236999.1| clathrin heavy chain [Glycine max] gi|133586...   199   3e-49
gb|AFV61748.1| clathrin heavy chain, partial [Leucaena leucoceph...   197   1e-48
ref|XP_003538472.1| PREDICTED: clathrin heavy chain 1-like [Glyc...   197   1e-48
ref|XP_002311238.1| predicted protein [Populus trichocarpa] gi|2...   197   1e-48
gb|AAG50828.1|AC074395_2 clathrin heavy chain, putative [Arabido...   196   2e-48

>ref|NP_001236999.1| clathrin heavy chain [Glycine max] gi|1335862|gb|AAC49294.1| clathrin
            heavy chain [Glycine max]
          Length = 1700

 Score =  199 bits (505), Expect = 3e-49
 Identities = 94/103 (91%), Positives = 99/103 (96%)
 Frame = -2

Query: 310  FYNPEKTKNFLMEAKLSDAWPLINVCDRFAFVPDLTHYLYSNNMLQYIEGYVQKVNPGNA 131
            FY+PEKTKNFLMEAKL DA PLINVCDRF FVPDLTHYLY+NNML+YIEGYVQKVNPGNA
Sbjct: 766  FYDPEKTKNFLMEAKLPDARPLINVCDRFGFVPDLTHYLYTNNMLRYIEGYVQKVNPGNA 825

Query: 130  PLVIGQLLDDECPEDFIKGLIFSVRSLLPVEPLVEKCEKRNRL 2
            PLV+GQLLDDECPEDFIKGLI SVRSLLPVEPLVE+CEKRNRL
Sbjct: 826  PLVVGQLLDDECPEDFIKGLILSVRSLLPVEPLVEECEKRNRL 868


>gb|AFV61748.1| clathrin heavy chain, partial [Leucaena leucocephala]
          Length = 1232

 Score =  197 bits (500), Expect = 1e-48
 Identities = 93/103 (90%), Positives = 99/103 (96%)
 Frame = -2

Query: 310 FYNPEKTKNFLMEAKLSDAWPLINVCDRFAFVPDLTHYLYSNNMLQYIEGYVQKVNPGNA 131
           FY+PEKTKNFLMEAKL DA PLINVCDRF FVPDLTHYLY++NML+YIEGYVQKVNPGNA
Sbjct: 289 FYDPEKTKNFLMEAKLPDARPLINVCDRFGFVPDLTHYLYTSNMLRYIEGYVQKVNPGNA 348

Query: 130 PLVIGQLLDDECPEDFIKGLIFSVRSLLPVEPLVEKCEKRNRL 2
           PLV+GQLLDDECPEDFIKGLI SVRSLLPVEPLVE+CEKRNRL
Sbjct: 349 PLVVGQLLDDECPEDFIKGLILSVRSLLPVEPLVEECEKRNRL 391


>ref|XP_003538472.1| PREDICTED: clathrin heavy chain 1-like [Glycine max]
          Length = 1700

 Score =  197 bits (500), Expect = 1e-48
 Identities = 93/103 (90%), Positives = 99/103 (96%)
 Frame = -2

Query: 310  FYNPEKTKNFLMEAKLSDAWPLINVCDRFAFVPDLTHYLYSNNMLQYIEGYVQKVNPGNA 131
            FY+PEKTKNFLMEAKL DA PLINVCDRF FVPDLTHYLY++NML+YIEGYVQKVNPGNA
Sbjct: 767  FYDPEKTKNFLMEAKLPDARPLINVCDRFGFVPDLTHYLYTSNMLRYIEGYVQKVNPGNA 826

Query: 130  PLVIGQLLDDECPEDFIKGLIFSVRSLLPVEPLVEKCEKRNRL 2
            PLV+GQLLDDECPEDFIKGLI SVRSLLPVEPLVE+CEKRNRL
Sbjct: 827  PLVVGQLLDDECPEDFIKGLILSVRSLLPVEPLVEECEKRNRL 869


>ref|XP_002311238.1| predicted protein [Populus trichocarpa] gi|222851058|gb|EEE88605.1|
            predicted protein [Populus trichocarpa]
          Length = 1700

 Score =  197 bits (500), Expect = 1e-48
 Identities = 94/103 (91%), Positives = 98/103 (95%)
 Frame = -2

Query: 310  FYNPEKTKNFLMEAKLSDAWPLINVCDRFAFVPDLTHYLYSNNMLQYIEGYVQKVNPGNA 131
            FY+PEKTKNFLMEAKL DA PLINVCDRF FV DLTHYLYSNNML+YIEGYVQKVNPGNA
Sbjct: 762  FYDPEKTKNFLMEAKLPDARPLINVCDRFGFVADLTHYLYSNNMLRYIEGYVQKVNPGNA 821

Query: 130  PLVIGQLLDDECPEDFIKGLIFSVRSLLPVEPLVEKCEKRNRL 2
            PLV+GQLLDDECPEDFIKGLI SVRSLLPVEPLVE+CEKRNRL
Sbjct: 822  PLVVGQLLDDECPEDFIKGLILSVRSLLPVEPLVEECEKRNRL 864


>gb|AAG50828.1|AC074395_2 clathrin heavy chain, putative [Arabidopsis thaliana]
          Length = 1516

 Score =  196 bits (498), Expect = 2e-48
 Identities = 93/103 (90%), Positives = 99/103 (96%)
 Frame = -2

Query: 310 FYNPEKTKNFLMEAKLSDAWPLINVCDRFAFVPDLTHYLYSNNMLQYIEGYVQKVNPGNA 131
           FY+ EKTKNFLMEAKL DA PLINVCDRF+FVPDLTHYLY+NNML+YIEGYVQKVNPGNA
Sbjct: 580 FYDAEKTKNFLMEAKLPDARPLINVCDRFSFVPDLTHYLYTNNMLRYIEGYVQKVNPGNA 639

Query: 130 PLVIGQLLDDECPEDFIKGLIFSVRSLLPVEPLVEKCEKRNRL 2
           PLV+GQLLDDECPEDFIKGLI SVRSLLPVEPLVE+CEKRNRL
Sbjct: 640 PLVVGQLLDDECPEDFIKGLILSVRSLLPVEPLVEECEKRNRL 682


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