BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00037969
         (405 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265138.1| PREDICTED: pentatricopeptide repeat-containi...    80   1e-13
emb|CAN67593.1| hypothetical protein VITISV_000699 [Vitis vinifera]    80   1e-13
emb|CAN74489.1| hypothetical protein VITISV_029273 [Vitis vinifera]    80   1e-13
ref|XP_003618091.1| Pentatricopeptide repeat-containing protein ...    77   2e-12
ref|XP_004167803.1| PREDICTED: pentatricopeptide repeat-containi...    72   4e-11

>ref|XP_002265138.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
           chloroplastic [Vitis vinifera]
          Length = 825

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 34/61 (55%), Positives = 42/61 (68%)
 Frame = -2

Query: 404 KGLRKETGCSWIEIGSVVNCFTSKDQKHPQCDAIYAKLAELALEMKEAGYIPSFSCSNGD 225
           KGL KE GCSW+E+   VNCF S+D KHPQC  IY  L +LA+EMK+AGY P  +   G 
Sbjct: 760 KGLMKEAGCSWVEVAGHVNCFMSRDHKHPQCAEIYQMLEKLAMEMKDAGYKPCLNLQTGG 819

Query: 224 V 222
           +
Sbjct: 820 I 820


>emb|CAN67593.1| hypothetical protein VITISV_000699 [Vitis vinifera]
          Length = 825

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 34/61 (55%), Positives = 42/61 (68%)
 Frame = -2

Query: 404 KGLRKETGCSWIEIGSVVNCFTSKDQKHPQCDAIYAKLAELALEMKEAGYIPSFSCSNGD 225
           KGL KE GCSW+E+   VNCF S+D KHPQC  IY  L +LA+EMK+AGY P  +   G 
Sbjct: 760 KGLMKEAGCSWVEVAGHVNCFMSRDHKHPQCAEIYQMLEKLAMEMKDAGYKPCLNLQTGG 819

Query: 224 V 222
           +
Sbjct: 820 I 820


>emb|CAN74489.1| hypothetical protein VITISV_029273 [Vitis vinifera]
          Length = 102

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 34/61 (55%), Positives = 42/61 (68%)
 Frame = -2

Query: 404 KGLRKETGCSWIEIGSVVNCFTSKDQKHPQCDAIYAKLAELALEMKEAGYIPSFSCSNGD 225
           KGL KE GCSW+E+   VNCF S+D KHPQC  IY  L +LA+EMK+AGY P  +   G 
Sbjct: 37  KGLMKEAGCSWVEVAGHVNCFMSRDHKHPQCAEIYQMLEKLAMEMKDAGYKPCLNLQTGG 96

Query: 224 V 222
           +
Sbjct: 97  I 97


>ref|XP_003618091.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355519426|gb|AET01050.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 828

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 34/55 (61%), Positives = 39/55 (70%)
 Frame = -2

Query: 404 KGLRKETGCSWIEIGSVVNCFTSKDQKHPQCDAIYAKLAELALEMKEAGYIPSFS 240
           KGL KETGCSW+EI   VNCF S+D+KHPQ   IY  L  L L+MK AGY P +S
Sbjct: 763 KGLHKETGCSWVEIAGFVNCFVSRDEKHPQSSEIYYMLDMLTLDMKYAGYKPQYS 817


>ref|XP_004167803.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
           chloroplastic-like [Cucumis sativus]
          Length = 817

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 33/52 (63%), Positives = 39/52 (75%)
 Frame = -2

Query: 404 KGLRKETGCSWIEIGSVVNCFTSKDQKHPQCDAIYAKLAELALEMKEAGYIP 249
           +GL+KETG SWIEI   +N F SKD+KHPQ D IY+ L EL +EMK AGY P
Sbjct: 752 RGLKKETGSSWIEIAGYMNHFASKDRKHPQSDQIYSMLEELLMEMKHAGYRP 803