BLASTX nr result

ID: Coptis24_contig00037913 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00037913
         (247 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK96309.1| unknown [Populus trichocarpa x Populus deltoides]       85   5e-15
ref|XP_002315711.1| predicted protein [Populus trichocarpa] gi|2...    84   1e-14
ref|XP_002315712.1| predicted protein [Populus trichocarpa] gi|2...    80   1e-13
ref|XP_003548216.1| PREDICTED: 1-aminocyclopropane-1-carboxylate...    80   2e-13
ref|XP_003532285.1| PREDICTED: 1-aminocyclopropane-1-carboxylate...    79   3e-13

>gb|ABK96309.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 370

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 40/69 (57%), Positives = 45/69 (65%)
 Frame = -2

Query: 207 RDIILQYSKEVQGLGITXXXXXXXXXXXXXXXLREMDCVKGHVLLGHYYPACPQPELTMG 28
           RDII++YS +V  L                  L+EMDCVKGH LL HYYPACP+PEL MG
Sbjct: 180 RDIIMEYSNKVCKLATVLFELLSEALGLKSDHLKEMDCVKGHALLSHYYPACPEPELAMG 239

Query: 27  TTKHSDPDF 1
           TTKHSDPDF
Sbjct: 240 TTKHSDPDF 248


>ref|XP_002315711.1| predicted protein [Populus trichocarpa] gi|222864751|gb|EEF01882.1|
           predicted protein [Populus trichocarpa]
          Length = 374

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 39/69 (56%), Positives = 45/69 (65%)
 Frame = -2

Query: 207 RDIILQYSKEVQGLGITXXXXXXXXXXXXXXXLREMDCVKGHVLLGHYYPACPQPELTMG 28
           RDI+++YS +V  L                  L+EMDCVKGH LL HYYPACP+PEL MG
Sbjct: 180 RDIMMEYSNKVCKLATVLFELLSEALGLKSDHLKEMDCVKGHALLSHYYPACPEPELAMG 239

Query: 27  TTKHSDPDF 1
           TTKHSDPDF
Sbjct: 240 TTKHSDPDF 248


>ref|XP_002315712.1| predicted protein [Populus trichocarpa] gi|222864752|gb|EEF01883.1|
           predicted protein [Populus trichocarpa]
          Length = 366

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 37/69 (53%), Positives = 47/69 (68%)
 Frame = -2

Query: 207 RDIILQYSKEVQGLGITXXXXXXXXXXXXXXXLREMDCVKGHVLLGHYYPACPQPELTMG 28
           RDI+++Y+KEV  LG +               L+++DC KG  +LGHYYPACPQPELT+G
Sbjct: 174 RDILIEYTKEVMKLGNSLFELLSEALGLNPNHLKDIDCSKGLTILGHYYPACPQPELTLG 233

Query: 27  TTKHSDPDF 1
           TTKHSD DF
Sbjct: 234 TTKHSDNDF 242


>ref|XP_003548216.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 1-like
           [Glycine max]
          Length = 369

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 36/69 (52%), Positives = 45/69 (65%)
 Frame = -2

Query: 207 RDIILQYSKEVQGLGITXXXXXXXXXXXXXXXLREMDCVKGHVLLGHYYPACPQPELTMG 28
           RD+ ++YS++VQ LG                 L  MDC KGH +L HYYP+CP+PELTMG
Sbjct: 177 RDVAMEYSRQVQLLGRVLFGLLSEALGLDPDHLEGMDCAKGHSILFHYYPSCPEPELTMG 236

Query: 27  TTKHSDPDF 1
           TT+HSDPDF
Sbjct: 237 TTRHSDPDF 245


>ref|XP_003532285.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog
           12-like [Glycine max]
          Length = 690

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 34/69 (49%), Positives = 48/69 (69%)
 Frame = -2

Query: 207 RDIILQYSKEVQGLGITXXXXXXXXXXXXXXXLREMDCVKGHVLLGHYYPACPQPELTMG 28
           RDI+++YSK+++ LG T               L+E++C +G  +LGHYYPACP+PELTMG
Sbjct: 497 RDIVIEYSKKIRDLGFTMFELLSEALGLNPSYLKELNCAEGLFILGHYYPACPEPELTMG 556

Query: 27  TTKHSDPDF 1
           TTKH+D +F
Sbjct: 557 TTKHTDSNF 565



 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 28/69 (40%), Positives = 43/69 (62%)
 Frame = -2

Query: 207 RDIILQYSKEVQGLGITXXXXXXXXXXXXXXXLREMDCVKGHVLLGHYYPACPQPELTMG 28
           RDI+++Y+K+++ +G T               L E+ C +G   +G+YYPACP+PELTMG
Sbjct: 182 RDIVIEYTKKIRDVGFTIFELLSEALGLNSSYLNELSCGEGLFTVGNYYPACPEPELTMG 241

Query: 27  TTKHSDPDF 1
             KH+D +F
Sbjct: 242 AAKHTDGNF 250


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