BLASTX nr result
ID: Coptis24_contig00037913
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00037913 (247 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ABK96309.1| unknown [Populus trichocarpa x Populus deltoides] 85 5e-15 ref|XP_002315711.1| predicted protein [Populus trichocarpa] gi|2... 84 1e-14 ref|XP_002315712.1| predicted protein [Populus trichocarpa] gi|2... 80 1e-13 ref|XP_003548216.1| PREDICTED: 1-aminocyclopropane-1-carboxylate... 80 2e-13 ref|XP_003532285.1| PREDICTED: 1-aminocyclopropane-1-carboxylate... 79 3e-13 >gb|ABK96309.1| unknown [Populus trichocarpa x Populus deltoides] Length = 370 Score = 85.1 bits (209), Expect = 5e-15 Identities = 40/69 (57%), Positives = 45/69 (65%) Frame = -2 Query: 207 RDIILQYSKEVQGLGITXXXXXXXXXXXXXXXLREMDCVKGHVLLGHYYPACPQPELTMG 28 RDII++YS +V L L+EMDCVKGH LL HYYPACP+PEL MG Sbjct: 180 RDIIMEYSNKVCKLATVLFELLSEALGLKSDHLKEMDCVKGHALLSHYYPACPEPELAMG 239 Query: 27 TTKHSDPDF 1 TTKHSDPDF Sbjct: 240 TTKHSDPDF 248 >ref|XP_002315711.1| predicted protein [Populus trichocarpa] gi|222864751|gb|EEF01882.1| predicted protein [Populus trichocarpa] Length = 374 Score = 84.0 bits (206), Expect = 1e-14 Identities = 39/69 (56%), Positives = 45/69 (65%) Frame = -2 Query: 207 RDIILQYSKEVQGLGITXXXXXXXXXXXXXXXLREMDCVKGHVLLGHYYPACPQPELTMG 28 RDI+++YS +V L L+EMDCVKGH LL HYYPACP+PEL MG Sbjct: 180 RDIMMEYSNKVCKLATVLFELLSEALGLKSDHLKEMDCVKGHALLSHYYPACPEPELAMG 239 Query: 27 TTKHSDPDF 1 TTKHSDPDF Sbjct: 240 TTKHSDPDF 248 >ref|XP_002315712.1| predicted protein [Populus trichocarpa] gi|222864752|gb|EEF01883.1| predicted protein [Populus trichocarpa] Length = 366 Score = 80.5 bits (197), Expect = 1e-13 Identities = 37/69 (53%), Positives = 47/69 (68%) Frame = -2 Query: 207 RDIILQYSKEVQGLGITXXXXXXXXXXXXXXXLREMDCVKGHVLLGHYYPACPQPELTMG 28 RDI+++Y+KEV LG + L+++DC KG +LGHYYPACPQPELT+G Sbjct: 174 RDILIEYTKEVMKLGNSLFELLSEALGLNPNHLKDIDCSKGLTILGHYYPACPQPELTLG 233 Query: 27 TTKHSDPDF 1 TTKHSD DF Sbjct: 234 TTKHSDNDF 242 >ref|XP_003548216.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 1-like [Glycine max] Length = 369 Score = 79.7 bits (195), Expect = 2e-13 Identities = 36/69 (52%), Positives = 45/69 (65%) Frame = -2 Query: 207 RDIILQYSKEVQGLGITXXXXXXXXXXXXXXXLREMDCVKGHVLLGHYYPACPQPELTMG 28 RD+ ++YS++VQ LG L MDC KGH +L HYYP+CP+PELTMG Sbjct: 177 RDVAMEYSRQVQLLGRVLFGLLSEALGLDPDHLEGMDCAKGHSILFHYYPSCPEPELTMG 236 Query: 27 TTKHSDPDF 1 TT+HSDPDF Sbjct: 237 TTRHSDPDF 245 >ref|XP_003532285.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 12-like [Glycine max] Length = 690 Score = 79.3 bits (194), Expect = 3e-13 Identities = 34/69 (49%), Positives = 48/69 (69%) Frame = -2 Query: 207 RDIILQYSKEVQGLGITXXXXXXXXXXXXXXXLREMDCVKGHVLLGHYYPACPQPELTMG 28 RDI+++YSK+++ LG T L+E++C +G +LGHYYPACP+PELTMG Sbjct: 497 RDIVIEYSKKIRDLGFTMFELLSEALGLNPSYLKELNCAEGLFILGHYYPACPEPELTMG 556 Query: 27 TTKHSDPDF 1 TTKH+D +F Sbjct: 557 TTKHTDSNF 565 Score = 65.5 bits (158), Expect = 4e-09 Identities = 28/69 (40%), Positives = 43/69 (62%) Frame = -2 Query: 207 RDIILQYSKEVQGLGITXXXXXXXXXXXXXXXLREMDCVKGHVLLGHYYPACPQPELTMG 28 RDI+++Y+K+++ +G T L E+ C +G +G+YYPACP+PELTMG Sbjct: 182 RDIVIEYTKKIRDVGFTIFELLSEALGLNSSYLNELSCGEGLFTVGNYYPACPEPELTMG 241 Query: 27 TTKHSDPDF 1 KH+D +F Sbjct: 242 AAKHTDGNF 250