BLASTX nr result

ID: Coptis24_contig00037903 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00037903
         (409 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265157.2| PREDICTED: uncharacterized protein LOC100257...    85   5e-15
ref|XP_002298449.1| predicted protein [Populus trichocarpa] gi|2...    81   1e-13
ref|XP_003534489.1| PREDICTED: multiple C2 and transmembrane dom...    72   4e-11
emb|CBI24848.3| unnamed protein product [Vitis vinifera]               72   6e-11
ref|XP_004161406.1| PREDICTED: LOW QUALITY PROTEIN: multiple C2 ...    70   2e-10

>ref|XP_002265157.2| PREDICTED: uncharacterized protein LOC100257873 [Vitis vinifera]
          Length = 1046

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 47/110 (42%), Positives = 64/110 (58%)
 Frame = -2

Query: 333 SAPEVTDTSNAAVSNTKPSPPKPAIDNSSGATSAAKISVEVIKESTEVKVETTQYIHKHQ 154
           S+P +T  S       K S P P  ++   +    K   E IKE  EV+VE   +I+K+Q
Sbjct: 177 SSPSITRVSLIE----KSSSPIPEAESPRSSVEEPK---EEIKEPVEVRVEANPHIYKYQ 229

Query: 153 TSSYQPGISVERRPEGVPSTMQQMNPQIHTNRQEDFKLKDTSPRLGERWP 4
               QP ISVE+ P+G+ STM Q NP IH + Q+D+ LK+  P+LGERWP
Sbjct: 230 VLQ-QPAISVEKGPQGISSTMHQANPDIHPSPQDDYNLKEMDPQLGERWP 278


>ref|XP_002298449.1| predicted protein [Populus trichocarpa] gi|222845707|gb|EEE83254.1|
           predicted protein [Populus trichocarpa]
          Length = 1051

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 45/108 (41%), Positives = 61/108 (56%)
 Frame = -2

Query: 324 EVTDTSNAAVSNTKPSPPKPAIDNSSGATSAAKISVEVIKESTEVKVETTQYIHKHQTSS 145
           E+  TS A     +P     AI  +SG   A K      KE T+++ +TTQ++HKHQ   
Sbjct: 181 EILHTSEAITE--QPGKKISAISETSGGFPA-KEPKNSNKEPTKIRADTTQHVHKHQVLQ 237

Query: 144 YQPGISVERRPEGVPSTMQQMNPQIHTNRQEDFKLKDTSPRLGERWPN 1
            +   SVE+ P G P TM   NP  H++  +DF LKDT P+LGERWP+
Sbjct: 238 -KTSQSVEKLPNGAPYTMHAANPSAHSSDLDDFNLKDTDPQLGERWPS 284


>ref|XP_003534489.1| PREDICTED: multiple C2 and transmembrane domain-containing protein
           2-like [Glycine max]
          Length = 1060

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 37/83 (44%), Positives = 53/83 (63%), Gaps = 3/83 (3%)
 Frame = -2

Query: 240 TSAAKISVEVIKESTEVKVETTQYIHKHQTSSYQPGISVERRPEGVPSTMQQMNPQI--- 70
           +S+  I  E  KE+ E  VET Q + KHQ    Q  IS++RRP+G PSTM  ++PQ+   
Sbjct: 211 SSSVDIDQEPKKENREAVVETVQQLDKHQVLQPQT-ISIKRRPQGTPSTMHSVDPQVQSS 269

Query: 69  HTNRQEDFKLKDTSPRLGERWPN 1
           H +  E++ L DT+ +LGERWP+
Sbjct: 270 HPSNDENYNLSDTNVQLGERWPS 292


>emb|CBI24848.3| unnamed protein product [Vitis vinifera]
          Length = 295

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 39/95 (41%), Positives = 59/95 (62%)
 Frame = -2

Query: 294 SNTKPSPPKPAIDNSSGATSAAKISVEVIKESTEVKVETTQYIHKHQTSSYQPGISVERR 115
           S T+P P    +++S   T      V +I++S  ++VE   +I+K+Q    QP ISVE+ 
Sbjct: 189 SETEPMPVSNILNSSPSITR-----VSLIEKS--IRVEANPHIYKYQVLQ-QPAISVEKG 240

Query: 114 PEGVPSTMQQMNPQIHTNRQEDFKLKDTSPRLGER 10
           P+G+ STM Q NP IH + Q+D+ LK+  P+LGER
Sbjct: 241 PQGISSTMHQANPDIHPSPQDDYNLKEMDPQLGER 275


>ref|XP_004161406.1| PREDICTED: LOW QUALITY PROTEIN: multiple C2 and transmembrane
           domain-containing protein 2-like [Cucumis sativus]
          Length = 1055

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 43/128 (33%), Positives = 67/128 (52%), Gaps = 21/128 (16%)
 Frame = -2

Query: 321 VTDTSNAAVSNTKPSPPKPAIDNSSGATSAAKISV-------------EVIKESTEVKVE 181
           VT      VS+ +  P K  +  S    S + + V             E I+E  E + E
Sbjct: 163 VTKADGVPVSDIQEEPKKDVLKISPSKDSNSTLPVVEFRIEDPAKEPKEEIEEPIEARQE 222

Query: 180 TTQYIHKHQTSSYQPGISVERRPEG--------VPSTMQQMNPQIHTNRQEDFKLKDTSP 25
           TTQ +HK QT   +P I V+RRP+G        +P TM   N + +++ Q+D++++DT+P
Sbjct: 223 TTQ-LHKQQTMQ-RPRIVVQRRPQGASSSMNRSIPPTMNTSNSEANSSNQDDYEIRDTNP 280

Query: 24  RLGERWPN 1
           +LGE+WPN
Sbjct: 281 QLGEQWPN 288


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