BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00037899
         (365 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAP43914.1| integrase [Gossypium raimondii]                        108   4e-22
gb|AAP43919.1| integrase [Gossypium hirsutum]                         105   4e-21
emb|CAN77900.1| hypothetical protein VITISV_037350 [Vitis vinifera]   101   7e-20
emb|CAN74758.1| hypothetical protein VITISV_039181 [Vitis vinifera]   100   9e-20
gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana]              100   2e-19

>gb|AAP43914.1| integrase [Gossypium raimondii]
          Length = 340

 Score =  108 bits (270), Expect = 4e-22
 Identities = 49/106 (46%), Positives = 73/106 (68%)
 Frame = -1

Query: 359 LNTQHAKWVEFLQSYTFHIKHKAGIQNQVADALSRRYSLLNTIEAKVLGFEALAELYKDD 180
           LN +HA+WVEF++S+ + I++K G  N VADALSRRY+LL+T+  K+LGFE L +LY  D
Sbjct: 65  LNKRHARWVEFIESFPYGIRYKKGKDNIVADALSRRYTLLSTLHTKLLGFEYLKDLYATD 124

Query: 179 PYFAKIWEDCSKGLYQHFFTARWFSLQKYQLCIPACSLRKTIIIEA 42
             FA I++ C  G +  F+    +  Q  +LC+P CS+R+ ++ EA
Sbjct: 125 SDFASIYDACEHGAFHKFYKHDGYLFQNNRLCLPKCSMRELLVREA 170


>gb|AAP43919.1| integrase [Gossypium hirsutum]
          Length = 334

 Score =  105 bits (262), Expect = 4e-21
 Identities = 48/106 (45%), Positives = 74/106 (69%)
 Frame = -1

Query: 359 LNTQHAKWVEFLQSYTFHIKHKAGIQNQVADALSRRYSLLNTIEAKVLGFEALAELYKDD 180
           L+ +HA+WVEF++++ + I++K G  N VADALSRRY+L+ T+ AKVLGFE + ELY DD
Sbjct: 65  LSKRHARWVEFIETFPYMIQYKIGNDNVVADALSRRYTLITTLNAKVLGFEHIKELYDDD 124

Query: 179 PYFAKIWEDCSKGLYQHFFTARWFSLQKYQLCIPACSLRKTIIIEA 42
             F+ I+++C    ++ F+       +  +LCIP CS+R+ +I EA
Sbjct: 125 TDFSHIYKNCGHTAFEKFYLVDGLLFRLNRLCIPKCSMRELLIHEA 170


>emb|CAN77900.1| hypothetical protein VITISV_037350 [Vitis vinifera]
          Length = 1173

 Score =  101 bits (251), Expect = 7e-20
 Identities = 46/106 (43%), Positives = 74/106 (69%)
 Frame = -1

Query: 359  LNTQHAKWVEFLQSYTFHIKHKAGIQNQVADALSRRYSLLNTIEAKVLGFEALAELYKDD 180
            LN +HAKWVEF++++ + IK+K G +N V DALSRRY+L++T+ AK+LGFE + ELY +D
Sbjct: 687  LNRRHAKWVEFIETFPYVIKYKQGKENIVVDALSRRYALVSTLNAKLLGFEYVKELYAND 746

Query: 179  PYFAKIWEDCSKGLYQHFFTARWFSLQKYQLCIPACSLRKTIIIEA 42
              FA ++  C K  +  F+    +  ++ +LC+P  S+R+ ++ EA
Sbjct: 747  DDFASVYGACEKVAFGKFYRLDGYLFRENRLCVPNSSMRELLVREA 792


>emb|CAN74758.1| hypothetical protein VITISV_039181 [Vitis vinifera]
          Length = 337

 Score =  100 bits (250), Expect = 9e-20
 Identities = 47/106 (44%), Positives = 74/106 (69%)
 Frame = -1

Query: 359 LNTQHAKWVEFLQSYTFHIKHKAGIQNQVADALSRRYSLLNTIEAKVLGFEALAELYKDD 180
           LN +HAKWVEF++++++ IK+K G +N VADALSRRY+L++T+ AK+LGFE + ELY +D
Sbjct: 64  LNRRHAKWVEFIETFSYVIKYKQGKENIVADALSRRYALVSTLNAKLLGFEYVKELYAND 123

Query: 179 PYFAKIWEDCSKGLYQHFFTARWFSLQKYQLCIPACSLRKTIIIEA 42
             FA ++  C K  +  F+    +  +  +LC+P  S+ + I+ EA
Sbjct: 124 DDFASVYGACEKVAFGKFYRLDGYLFRDNRLCVPNSSMPELIVREA 169


>gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana]
          Length = 1887

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 49/106 (46%), Positives = 70/106 (66%)
 Frame = -1

Query: 359  LNTQHAKWVEFLQSYTFHIKHKAGIQNQVADALSRRYSLLNTIEAKVLGFEALAELYKDD 180
            LN +HA+WVEF++++ + IK+K G  N VADALSRRY LL++++AK+LGFE +  LY +D
Sbjct: 1286 LNKRHARWVEFIETFPYVIKYKKGKDNVVADALSRRYVLLSSLDAKLLGFEHIKSLYAND 1345

Query: 179  PYFAKIWEDCSKGLYQHFFTARWFSLQKYQLCIPACSLRKTIIIEA 42
              F KI+  C K  +  ++    F     +LCIP  SLR+  I EA
Sbjct: 1346 SDFEKIYSSCEKFAFGKYYRHDGFLFYDNRLCIPNSSLRELFIREA 1391