BLASTX nr result

ID: Coptis24_contig00037898 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00037898
         (273 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002297982.1| predicted protein [Populus trichocarpa] gi|2...   143   2e-32
emb|CBI34467.3| unnamed protein product [Vitis vinifera]              142   3e-32
ref|XP_002270849.1| PREDICTED: uncharacterized protein KIAA1310 ...   142   3e-32
gb|EEE62749.1| hypothetical protein OsJ_17552 [Oryza sativa Japo...   140   1e-31
gb|ABK26204.1| unknown [Picea sitchensis]                             140   1e-31

>ref|XP_002297982.1| predicted protein [Populus trichocarpa] gi|222845240|gb|EEE82787.1|
           predicted protein [Populus trichocarpa]
          Length = 228

 Score =  143 bits (360), Expect = 2e-32
 Identities = 66/90 (73%), Positives = 76/90 (84%)
 Frame = +3

Query: 3   DIVKTAVDKHPGHPLVLVGKSMGSRVSCMVAGKDEINVSAIICLGYPLKGMNGTIRDEIL 182
           DIVK   DK+P HPL+L GKSMGSRVSCMVA + +I+ SA+ICLGYPLK M G +RDE L
Sbjct: 87  DIVKKTTDKYPAHPLILAGKSMGSRVSCMVAAEVDIDASAVICLGYPLKAMGGAVRDETL 146

Query: 183 LQVTVPIMFVQGSKDNLCPLDKLAAVCKKM 272
           LQ+TVP+MFVQGSKD LCPL+KL AVCKKM
Sbjct: 147 LQLTVPVMFVQGSKDGLCPLEKLEAVCKKM 176


>emb|CBI34467.3| unnamed protein product [Vitis vinifera]
          Length = 205

 Score =  142 bits (358), Expect = 3e-32
 Identities = 68/90 (75%), Positives = 77/90 (85%)
 Frame = +3

Query: 3   DIVKTAVDKHPGHPLVLVGKSMGSRVSCMVAGKDEINVSAIICLGYPLKGMNGTIRDEIL 182
           DIVK  + K+PGHPL+L GKSMGSRVSCMVA  +EI  SA++CLGYPLKGM+GTIRDE L
Sbjct: 64  DIVKMTLAKYPGHPLILAGKSMGSRVSCMVASGEEIGASAVVCLGYPLKGMSGTIRDETL 123

Query: 183 LQVTVPIMFVQGSKDNLCPLDKLAAVCKKM 272
           LQ+ VPIMFVQGSKD LCPL+KL AV KKM
Sbjct: 124 LQLKVPIMFVQGSKDGLCPLEKLEAVRKKM 153


>ref|XP_002270849.1| PREDICTED: uncharacterized protein KIAA1310 homolog [Vitis
           vinifera]
          Length = 235

 Score =  142 bits (358), Expect = 3e-32
 Identities = 68/90 (75%), Positives = 77/90 (85%)
 Frame = +3

Query: 3   DIVKTAVDKHPGHPLVLVGKSMGSRVSCMVAGKDEINVSAIICLGYPLKGMNGTIRDEIL 182
           DIVK  + K+PGHPL+L GKSMGSRVSCMVA  +EI  SA++CLGYPLKGM+GTIRDE L
Sbjct: 94  DIVKMTLAKYPGHPLILAGKSMGSRVSCMVASGEEIGASAVVCLGYPLKGMSGTIRDETL 153

Query: 183 LQVTVPIMFVQGSKDNLCPLDKLAAVCKKM 272
           LQ+ VPIMFVQGSKD LCPL+KL AV KKM
Sbjct: 154 LQLKVPIMFVQGSKDGLCPLEKLEAVRKKM 183


>gb|EEE62749.1| hypothetical protein OsJ_17552 [Oryza sativa Japonica Group]
          Length = 246

 Score =  140 bits (352), Expect = 1e-31
 Identities = 66/89 (74%), Positives = 76/89 (85%)
 Frame = +3

Query: 6   IVKTAVDKHPGHPLVLVGKSMGSRVSCMVAGKDEINVSAIICLGYPLKGMNGTIRDEILL 185
           +VK AV KHPGHPLVL+GKSMGSRVSCMVA  D+I VSA+ICLGYPLKG+NG +RDE LL
Sbjct: 106 VVKDAVAKHPGHPLVLMGKSMGSRVSCMVADSDDIIVSAVICLGYPLKGVNGAVRDETLL 165

Query: 186 QVTVPIMFVQGSKDNLCPLDKLAAVCKKM 272
           ++ +P MFVQG+KD LCPLDKL A  KKM
Sbjct: 166 KLKIPTMFVQGNKDGLCPLDKLEATRKKM 194


>gb|ABK26204.1| unknown [Picea sitchensis]
          Length = 236

 Score =  140 bits (352), Expect = 1e-31
 Identities = 68/90 (75%), Positives = 78/90 (86%)
 Frame = +3

Query: 3   DIVKTAVDKHPGHPLVLVGKSMGSRVSCMVAGKDEINVSAIICLGYPLKGMNGTIRDEIL 182
           D VK AV K+PGHPLVLVGKSMGSRVSCMVA +++I+ SA+ICLGYPLKG+NG IRD  L
Sbjct: 95  DEVKKAVAKYPGHPLVLVGKSMGSRVSCMVAEREDIDASAVICLGYPLKGVNGAIRDGTL 154

Query: 183 LQVTVPIMFVQGSKDNLCPLDKLAAVCKKM 272
           LQ++VP+MFVQGSKD LCPL KL AV KKM
Sbjct: 155 LQLSVPVMFVQGSKDGLCPLQKLEAVRKKM 184


Top