BLASTX nr result
ID: Coptis24_contig00037889
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00037889 (248 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ABK24758.1| unknown [Picea sitchensis] 129 2e-28 ref|XP_002330805.1| predicted protein [Populus trichocarpa] gi|2... 125 4e-27 ref|XP_002324396.1| predicted protein [Populus trichocarpa] gi|2... 125 4e-27 ref|XP_004138765.1| PREDICTED: COP9 signalosome complex subunit ... 124 1e-26 emb|CBI37693.3| unnamed protein product [Vitis vinifera] 124 1e-26 >gb|ABK24758.1| unknown [Picea sitchensis] Length = 363 Score = 129 bits (325), Expect = 2e-28 Identities = 67/84 (79%), Positives = 75/84 (89%), Gaps = 2/84 (2%) Frame = +3 Query: 3 LLDLLWNTYWANTLSSSPLLGSRDYVAGQISDLAEKLEQAENYI-HNQCGSFL-QPNTKK 176 LLDLLWN YW NTLSSSPLLG+RDYVAGQISDLAEKLEQAE+ + H++ GSFL P KK Sbjct: 245 LLDLLWNKYWVNTLSSSPLLGNRDYVAGQISDLAEKLEQAESQLAHSRVGSFLVPPQRKK 304 Query: 177 EEDNQLAKITRDSSKITVEQVHGL 248 EE++QLAKIT+DSSKITVEQVHGL Sbjct: 305 EEESQLAKITKDSSKITVEQVHGL 328 >ref|XP_002330805.1| predicted protein [Populus trichocarpa] gi|222872607|gb|EEF09738.1| predicted protein [Populus trichocarpa] Length = 366 Score = 125 bits (314), Expect = 4e-27 Identities = 62/83 (74%), Positives = 71/83 (85%), Gaps = 1/83 (1%) Frame = +3 Query: 3 LLDLLWNTYWANTLSSSPLLGSRDYVAGQISDLAEKLEQAENYI-HNQCGSFLQPNTKKE 179 LLDLLWN YW NTLSSSPLLG+ DYVAGQISDLAEKLE AEN + H++ G + P KK+ Sbjct: 252 LLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEHAENQLAHSRLGPLMTPQRKKD 311 Query: 180 EDNQLAKITRDSSKITVEQVHGL 248 E++QLAKITRDS+KITVEQVHGL Sbjct: 312 EESQLAKITRDSAKITVEQVHGL 334 >ref|XP_002324396.1| predicted protein [Populus trichocarpa] gi|222865830|gb|EEF02961.1| predicted protein [Populus trichocarpa] Length = 366 Score = 125 bits (314), Expect = 4e-27 Identities = 62/83 (74%), Positives = 71/83 (85%), Gaps = 1/83 (1%) Frame = +3 Query: 3 LLDLLWNTYWANTLSSSPLLGSRDYVAGQISDLAEKLEQAENYI-HNQCGSFLQPNTKKE 179 LLDLLWN YW NTLSSSPLLG+ DYVAGQISDLAEKLE AEN + H++ G + P KK+ Sbjct: 252 LLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEHAENQLAHSRLGPLMAPQRKKD 311 Query: 180 EDNQLAKITRDSSKITVEQVHGL 248 E++QLAKITRDS+KITVEQVHGL Sbjct: 312 EESQLAKITRDSAKITVEQVHGL 334 >ref|XP_004138765.1| PREDICTED: COP9 signalosome complex subunit 5a-like [Cucumis sativus] gi|449499546|ref|XP_004160845.1| PREDICTED: COP9 signalosome complex subunit 5a-like [Cucumis sativus] Length = 365 Score = 124 bits (310), Expect = 1e-26 Identities = 64/84 (76%), Positives = 72/84 (85%), Gaps = 2/84 (2%) Frame = +3 Query: 3 LLDLLWNTYWANTLSSSPLLGSRDYVAGQISDLAEKLEQAENYI-HNQCGSFLQPN-TKK 176 LLDLLWN YW NTLSSSPLLG+ DYVAGQISDLAEKLEQ EN + H++ G + P+ KK Sbjct: 250 LLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQVENQLAHSRFGPLIAPSQRKK 309 Query: 177 EEDNQLAKITRDSSKITVEQVHGL 248 EED+QLAKITRDS+KITVEQVHGL Sbjct: 310 EEDSQLAKITRDSAKITVEQVHGL 333 >emb|CBI37693.3| unnamed protein product [Vitis vinifera] Length = 260 Score = 124 bits (310), Expect = 1e-26 Identities = 64/84 (76%), Positives = 73/84 (86%), Gaps = 2/84 (2%) Frame = +3 Query: 3 LLDLLWNTYWANTLSSSPLLGSRDYVAGQISDLAEKLEQAENYI-HNQCGSFLQPN-TKK 176 LLDLLWN YW NTLSSSPLLG+ DYVAGQISDLAEKLEQAEN + H++ G + P+ KK Sbjct: 145 LLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLAHSRFGPLIAPSQRKK 204 Query: 177 EEDNQLAKITRDSSKITVEQVHGL 248 EE++QLAKITRDS+KITVEQVHGL Sbjct: 205 EEESQLAKITRDSAKITVEQVHGL 228