BLASTX nr result

ID: Coptis24_contig00037889 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00037889
         (248 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK24758.1| unknown [Picea sitchensis]                             129   2e-28
ref|XP_002330805.1| predicted protein [Populus trichocarpa] gi|2...   125   4e-27
ref|XP_002324396.1| predicted protein [Populus trichocarpa] gi|2...   125   4e-27
ref|XP_004138765.1| PREDICTED: COP9 signalosome complex subunit ...   124   1e-26
emb|CBI37693.3| unnamed protein product [Vitis vinifera]              124   1e-26

>gb|ABK24758.1| unknown [Picea sitchensis]
          Length = 363

 Score =  129 bits (325), Expect = 2e-28
 Identities = 67/84 (79%), Positives = 75/84 (89%), Gaps = 2/84 (2%)
 Frame = +3

Query: 3   LLDLLWNTYWANTLSSSPLLGSRDYVAGQISDLAEKLEQAENYI-HNQCGSFL-QPNTKK 176
           LLDLLWN YW NTLSSSPLLG+RDYVAGQISDLAEKLEQAE+ + H++ GSFL  P  KK
Sbjct: 245 LLDLLWNKYWVNTLSSSPLLGNRDYVAGQISDLAEKLEQAESQLAHSRVGSFLVPPQRKK 304

Query: 177 EEDNQLAKITRDSSKITVEQVHGL 248
           EE++QLAKIT+DSSKITVEQVHGL
Sbjct: 305 EEESQLAKITKDSSKITVEQVHGL 328


>ref|XP_002330805.1| predicted protein [Populus trichocarpa] gi|222872607|gb|EEF09738.1|
           predicted protein [Populus trichocarpa]
          Length = 366

 Score =  125 bits (314), Expect = 4e-27
 Identities = 62/83 (74%), Positives = 71/83 (85%), Gaps = 1/83 (1%)
 Frame = +3

Query: 3   LLDLLWNTYWANTLSSSPLLGSRDYVAGQISDLAEKLEQAENYI-HNQCGSFLQPNTKKE 179
           LLDLLWN YW NTLSSSPLLG+ DYVAGQISDLAEKLE AEN + H++ G  + P  KK+
Sbjct: 252 LLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEHAENQLAHSRLGPLMTPQRKKD 311

Query: 180 EDNQLAKITRDSSKITVEQVHGL 248
           E++QLAKITRDS+KITVEQVHGL
Sbjct: 312 EESQLAKITRDSAKITVEQVHGL 334


>ref|XP_002324396.1| predicted protein [Populus trichocarpa] gi|222865830|gb|EEF02961.1|
           predicted protein [Populus trichocarpa]
          Length = 366

 Score =  125 bits (314), Expect = 4e-27
 Identities = 62/83 (74%), Positives = 71/83 (85%), Gaps = 1/83 (1%)
 Frame = +3

Query: 3   LLDLLWNTYWANTLSSSPLLGSRDYVAGQISDLAEKLEQAENYI-HNQCGSFLQPNTKKE 179
           LLDLLWN YW NTLSSSPLLG+ DYVAGQISDLAEKLE AEN + H++ G  + P  KK+
Sbjct: 252 LLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEHAENQLAHSRLGPLMAPQRKKD 311

Query: 180 EDNQLAKITRDSSKITVEQVHGL 248
           E++QLAKITRDS+KITVEQVHGL
Sbjct: 312 EESQLAKITRDSAKITVEQVHGL 334


>ref|XP_004138765.1| PREDICTED: COP9 signalosome complex subunit 5a-like [Cucumis
           sativus] gi|449499546|ref|XP_004160845.1| PREDICTED:
           COP9 signalosome complex subunit 5a-like [Cucumis
           sativus]
          Length = 365

 Score =  124 bits (310), Expect = 1e-26
 Identities = 64/84 (76%), Positives = 72/84 (85%), Gaps = 2/84 (2%)
 Frame = +3

Query: 3   LLDLLWNTYWANTLSSSPLLGSRDYVAGQISDLAEKLEQAENYI-HNQCGSFLQPN-TKK 176
           LLDLLWN YW NTLSSSPLLG+ DYVAGQISDLAEKLEQ EN + H++ G  + P+  KK
Sbjct: 250 LLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQVENQLAHSRFGPLIAPSQRKK 309

Query: 177 EEDNQLAKITRDSSKITVEQVHGL 248
           EED+QLAKITRDS+KITVEQVHGL
Sbjct: 310 EEDSQLAKITRDSAKITVEQVHGL 333


>emb|CBI37693.3| unnamed protein product [Vitis vinifera]
          Length = 260

 Score =  124 bits (310), Expect = 1e-26
 Identities = 64/84 (76%), Positives = 73/84 (86%), Gaps = 2/84 (2%)
 Frame = +3

Query: 3   LLDLLWNTYWANTLSSSPLLGSRDYVAGQISDLAEKLEQAENYI-HNQCGSFLQPN-TKK 176
           LLDLLWN YW NTLSSSPLLG+ DYVAGQISDLAEKLEQAEN + H++ G  + P+  KK
Sbjct: 145 LLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLAHSRFGPLIAPSQRKK 204

Query: 177 EEDNQLAKITRDSSKITVEQVHGL 248
           EE++QLAKITRDS+KITVEQVHGL
Sbjct: 205 EEESQLAKITRDSAKITVEQVHGL 228


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