BLASTX nr result

ID: Coptis24_contig00037873 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00037873
         (729 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002323230.1| predicted protein [Populus trichocarpa] gi|2...   198   8e-49
ref|XP_002308874.1| predicted protein [Populus trichocarpa] gi|2...   196   4e-48
ref|XP_002323227.1| predicted protein [Populus trichocarpa] gi|2...   190   2e-46
ref|XP_002277659.2| PREDICTED: uncharacterized protein LOC100250...   190   3e-46
ref|XP_002517284.1| conserved hypothetical protein [Ricinus comm...   181   1e-43

>ref|XP_002323230.1| predicted protein [Populus trichocarpa] gi|222867860|gb|EEF04991.1|
           predicted protein [Populus trichocarpa]
          Length = 474

 Score =  198 bits (504), Expect = 8e-49
 Identities = 110/228 (48%), Positives = 147/228 (64%), Gaps = 3/228 (1%)
 Frame = +3

Query: 42  LRIKEHLSKTEEESEDTILESLRRLKLMTLSVETLQATKIGMVVACLRKHKSKRISSFAR 221
           LRIK+ L  +++ES+  +LESLR+L+LM L+V+TL+AT+IG  V  LRKH SK+I   AR
Sbjct: 168 LRIKDILYNSQDESDSVLLESLRKLRLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLAR 227

Query: 222 TLVKEWKDLVDKWCSVVPDVIGGEGTPESMNPSVV--EEGLPSPPLDEGAFLATPTTSLE 395
           TL+++WK LVD+W S    + G EGTP+S+NPSVV  EEGLPSPPLDEGAF AT  TS+E
Sbjct: 228 TLIEDWKVLVDEWYSAANVIRGNEGTPDSVNPSVVDEEEGLPSPPLDEGAFFATQPTSME 287

Query: 396 LSRFFESMDDDGNLRNCGEFNMNSENERKATLQNQTFPTRMMQ-PNHEVVGSKENERQDM 572
           LS+FF+ MDDDGN RN GEF  N  + R+ + +NQ    +  Q P    + SK+NE Q M
Sbjct: 288 LSQFFDGMDDDGNPRNNGEFIKNHVSRRRPSAENQNISKQKQQTPKGANMPSKDNESQQM 347

Query: 573 RKRESVNKQTMIMNTDXXXXXXXXXXXXXXXMDGTTLRQELDTVNAQK 716
           RK+E V K +   N +                  T L ++ D V +Q+
Sbjct: 348 RKQEDVVKASKPSNANSGPGRPLKQNVEQKMNQETVLIRKTDKVTSQR 395


>ref|XP_002308874.1| predicted protein [Populus trichocarpa] gi|222854850|gb|EEE92397.1|
           predicted protein [Populus trichocarpa]
          Length = 483

 Score =  196 bits (498), Expect = 4e-48
 Identities = 103/196 (52%), Positives = 141/196 (71%), Gaps = 3/196 (1%)
 Frame = +3

Query: 42  LRIKEHLSKTEEESEDTILESLRRLKLMTLSVETLQATKIGMVVACLRKHKSKRISSFAR 221
           LRIK+ L  +++ES+  +LESLR+L+LM L+V+TL+AT+IG  V  LRKH SK+I   AR
Sbjct: 174 LRIKDILYNSQDESDSVLLESLRKLRLMALTVDTLKATEIGKAVNVLRKHGSKQIRYLAR 233

Query: 222 TLVKEWKDLVDKWCSVVPDVIGGEGTPESMNPSVV--EEGLPSPPLDEGAFLATPTTSLE 395
           TL+++WK LVD+W S    + G EGTP+S+NPSVV  EEGLPSPPLDEGAF AT  TS+E
Sbjct: 234 TLIEDWKVLVDEWYSTANAIRGDEGTPDSVNPSVVDEEEGLPSPPLDEGAFFATQPTSME 293

Query: 396 LSRFFESMDDDGNLRNCGEFNMNSENERKATLQNQTFPTRMMQ-PNHEVVGSKENERQDM 572
           LS+FF+ MDDDGN RN GEF  N E+ ++ +++ Q F  +    PN   V SK+N+ Q M
Sbjct: 294 LSQFFDGMDDDGNPRNGGEFIKNRESGQRPSVEKQNFAKQKQHTPNGANVLSKDNKSQQM 353

Query: 573 RKRESVNKQTMIMNTD 620
           R++E++ K +   N +
Sbjct: 354 RRQEAIVKASKPSNAN 369


>ref|XP_002323227.1| predicted protein [Populus trichocarpa] gi|222867857|gb|EEF04988.1|
           predicted protein [Populus trichocarpa]
          Length = 480

 Score =  190 bits (483), Expect = 2e-46
 Identities = 109/234 (46%), Positives = 147/234 (62%), Gaps = 9/234 (3%)
 Frame = +3

Query: 42  LRIKEHLSKTEEESEDTILESLRRLKLMTLSVETLQATKIGMVVACLRKHKSKRISSFAR 221
           LRIK+ L  +++ES+  +LESLR+L+LM L+V+TL+AT+IG  V  LRKH S++I   AR
Sbjct: 168 LRIKDILYNSQDESDSVLLESLRKLRLMALTVDTLKATEIGKAVNGLRKHGSEQIRHLAR 227

Query: 222 TLVKEWKDLVDKWCSVVPDVIG------GEGTPESMNPSVV--EEGLPSPPLDEGAFLAT 377
           TL+++WK LVD+W S    + G       EGTP+S+NPSVV  EEGLPSPPLDEGAF AT
Sbjct: 228 TLIEDWKVLVDEWYSAANVIRGRNLLASNEGTPDSVNPSVVDEEEGLPSPPLDEGAFFAT 287

Query: 378 PTTSLELSRFFESMDDDGNLRNCGEFNMNSENERKATLQNQTFPTRMMQ-PNHEVVGSKE 554
             TS+ELS+FF+ MDDDGN RN GEF  N  + R+ + +NQ    +  Q P    + SK+
Sbjct: 288 QPTSMELSQFFDGMDDDGNPRNNGEFIKNHVSRRRPSAENQNISKQKQQTPKGANMPSKD 347

Query: 555 NERQDMRKRESVNKQTMIMNTDXXXXXXXXXXXXXXXMDGTTLRQELDTVNAQK 716
           NE Q MRK+E V K +   N +                  T L ++ D V +Q+
Sbjct: 348 NESQQMRKQEDVVKASKPSNANSGPGRPLKQNVEQKMNQETVLIRKTDKVTSQR 401


>ref|XP_002277659.2| PREDICTED: uncharacterized protein LOC100250012 [Vitis vinifera]
          Length = 521

 Score =  190 bits (482), Expect = 3e-46
 Identities = 102/197 (51%), Positives = 133/197 (67%), Gaps = 5/197 (2%)
 Frame = +3

Query: 42  LRIKEHLSKTEEESEDTILESLRRLKLMTLSVETLQATKIGMVVACLRKHKSKRISSFAR 221
           LRI+E L  +++ES+  + +SLRRL+LM LSV+ L+AT+IG  V  LRKH SK+I   AR
Sbjct: 136 LRIREILEHSKDESDSVLFDSLRRLQLMVLSVDNLKATEIGKAVNGLRKHGSKQIRQLAR 195

Query: 222 TLVKEWKDLVDKWCSVVPDVIGGEGTPESMNPSVV-----EEGLPSPPLDEGAFLATPTT 386
           TL+ EWKD+VD+W +    +   EGTP+S+NPSVV     EEGLP PP+DE +FL T  T
Sbjct: 196 TLIDEWKDMVDEWVNATAAI--AEGTPDSVNPSVVDDDDDEEGLPFPPMDELSFLTTQPT 253

Query: 387 SLELSRFFESMDDDGNLRNCGEFNMNSENERKATLQNQTFPTRMMQPNHEVVGSKENERQ 566
           SLELS+FF+ MDDDGN RN GEFN N EN RK  L+NQ    R  Q   E  G  +++ Q
Sbjct: 254 SLELSQFFDGMDDDGNPRNNGEFNRNRENGRKPALENQNISKRKQQLPDEANGVTKDKGQ 313

Query: 567 DMRKRESVNKQTMIMNT 617
            ++K+E V K    +NT
Sbjct: 314 QIKKQEPVVKSNKPINT 330


>ref|XP_002517284.1| conserved hypothetical protein [Ricinus communis]
           gi|223543547|gb|EEF45077.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 473

 Score =  181 bits (460), Expect = 1e-43
 Identities = 96/188 (51%), Positives = 128/188 (68%), Gaps = 3/188 (1%)
 Frame = +3

Query: 42  LRIKEHLSKTEEESEDTILESLRRLKLMTLSVETLQATKIGMVVACLRKHKSKRISSFAR 221
           LRIK+ L  + +ESE  + ESLRRL+LM L+V+TL+AT+IG  V  LRKH S++I   AR
Sbjct: 164 LRIKDILLHSRDESESVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSQQIRHLAR 223

Query: 222 TLVKEWKDLVDKWCSVVPDVIGGEGTPESMNPSVV--EEGLPSPPLDEGAFLATPTTSLE 395
            L+  WK LVD+W S    + G EGTPES+NPSVV  E+GLPSPPLDE  F A   T +E
Sbjct: 224 VLIDGWKVLVDEWYSTTKAIRGDEGTPESVNPSVVDEEDGLPSPPLDEAFFFAAQNTGIE 283

Query: 396 LSRFFESMDDDGNLRNCGEFNMNSENERKATLQNQTFPTRMMQ-PNHEVVGSKENERQDM 572
           L++FF+ MDDDGN RN GEF  N EN RK++L+ +  P R    P+   V +K+N+    
Sbjct: 284 LAQFFDGMDDDGNPRNSGEFIKNRENGRKSSLEQKNIPKRKEHTPSEANVVAKDNKSHQS 343

Query: 573 RKRESVNK 596
           R++E++ K
Sbjct: 344 RRQEAMRK 351


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