BLASTX nr result

ID: Coptis24_contig00037871 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00037871
         (269 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267123.1| PREDICTED: probable GMP synthase [glutamine-...   114   8e-24
emb|CBI27404.3| unnamed protein product [Vitis vinifera]              114   8e-24
ref|XP_004135425.1| PREDICTED: probable GMP synthase [glutamine-...   105   3e-21
ref|XP_002314913.1| predicted protein [Populus trichocarpa] gi|2...   101   6e-20
ref|XP_002514580.1| DNA-3-methyladenine glycosylase, putative [R...    98   8e-19

>ref|XP_002267123.1| PREDICTED: probable GMP synthase [glutamine-hydrolyzing]-like
           [Vitis vinifera]
          Length = 318

 Score =  114 bits (285), Expect = 8e-24
 Identities = 55/85 (64%), Positives = 67/85 (78%), Gaps = 1/85 (1%)
 Frame = -3

Query: 252 IRDLRPPEIKEKLVSVSNVGQN-SMDIQDGNLKRCYWITKNSDKAYVQYHDESWGVPVYD 76
           +R + PPE +E  V+++NV Q  S D+ DG LKRC WITKNSDK YVQ+HDE WGVPVY+
Sbjct: 80  LRLIGPPERREVPVAITNVPQQPSPDVGDGELKRCNWITKNSDKVYVQFHDECWGVPVYE 139

Query: 75  DIQLFELLALSGMLMYHLWAEIVKR 1
           D QLFELLA+SGMLM + W EI+KR
Sbjct: 140 DNQLFELLAMSGMLMDYNWTEILKR 164


>emb|CBI27404.3| unnamed protein product [Vitis vinifera]
          Length = 290

 Score =  114 bits (285), Expect = 8e-24
 Identities = 55/85 (64%), Positives = 67/85 (78%), Gaps = 1/85 (1%)
 Frame = -3

Query: 252 IRDLRPPEIKEKLVSVSNVGQN-SMDIQDGNLKRCYWITKNSDKAYVQYHDESWGVPVYD 76
           +R + PPE +E  V+++NV Q  S D+ DG LKRC WITKNSDK YVQ+HDE WGVPVY+
Sbjct: 80  LRLIGPPERREVPVAITNVPQQPSPDVGDGELKRCNWITKNSDKVYVQFHDECWGVPVYE 139

Query: 75  DIQLFELLALSGMLMYHLWAEIVKR 1
           D QLFELLA+SGMLM + W EI+KR
Sbjct: 140 DNQLFELLAMSGMLMDYNWTEILKR 164


>ref|XP_004135425.1| PREDICTED: probable GMP synthase [glutamine-hydrolyzing]-like
           [Cucumis sativus] gi|449531521|ref|XP_004172734.1|
           PREDICTED: probable GMP synthase
           [glutamine-hydrolyzing]-like [Cucumis sativus]
          Length = 308

 Score =  105 bits (263), Expect = 3e-21
 Identities = 49/84 (58%), Positives = 61/84 (72%)
 Frame = -3

Query: 252 IRDLRPPEIKEKLVSVSNVGQNSMDIQDGNLKRCYWITKNSDKAYVQYHDESWGVPVYDD 73
           IR + PP  + ++    ++ Q S ++ DG L+RC WIT  SDKAYV +HDE WGVPVYDD
Sbjct: 81  IRLITPPPERREVPLPKSIQQQSQELSDGELRRCNWITHTSDKAYVSFHDECWGVPVYDD 140

Query: 72  IQLFELLALSGMLMYHLWAEIVKR 1
            +LFELLALSGMLM + W EIVKR
Sbjct: 141 NRLFELLALSGMLMDYNWTEIVKR 164


>ref|XP_002314913.1| predicted protein [Populus trichocarpa] gi|222863953|gb|EEF01084.1|
           predicted protein [Populus trichocarpa]
          Length = 227

 Score =  101 bits (252), Expect = 6e-20
 Identities = 46/64 (71%), Positives = 51/64 (79%)
 Frame = -3

Query: 192 QNSMDIQDGNLKRCYWITKNSDKAYVQYHDESWGVPVYDDIQLFELLALSGMLMYHLWAE 13
           Q + D  DG +KRC WITKNSDK YV +HDE WGVPVYDD QLFELLALSGMLM + W E
Sbjct: 110 QQNQDSNDGEVKRCNWITKNSDKVYVAFHDECWGVPVYDDNQLFELLALSGMLMDYNWTE 169

Query: 12  IVKR 1
           I+KR
Sbjct: 170 ILKR 173


>ref|XP_002514580.1| DNA-3-methyladenine glycosylase, putative [Ricinus communis]
           gi|223546184|gb|EEF47686.1| DNA-3-methyladenine
           glycosylase, putative [Ricinus communis]
          Length = 319

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 44/64 (68%), Positives = 50/64 (78%)
 Frame = -3

Query: 192 QNSMDIQDGNLKRCYWITKNSDKAYVQYHDESWGVPVYDDIQLFELLALSGMLMYHLWAE 13
           Q S +   G ++RC WITKNSDK YV +HDE WGVPVYDD QLFELLALSGMLM + W E
Sbjct: 112 QQSQESNGGEIRRCNWITKNSDKVYVAFHDECWGVPVYDDNQLFELLALSGMLMDYNWTE 171

Query: 12  IVKR 1
           I+KR
Sbjct: 172 ILKR 175


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