BLASTX nr result

ID: Coptis24_contig00037870 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00037870
         (528 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531804.1| Root phototropism protein, putative [Ricinus...   244   4e-63
ref|XP_002323684.1| predicted protein [Populus trichocarpa] gi|2...   233   2e-59
ref|XP_002269960.2| PREDICTED: BTB/POZ domain-containing protein...   232   2e-59
emb|CBI31167.3| unnamed protein product [Vitis vinifera]              232   2e-59
ref|NP_001066002.1| Os12g0117600 [Oryza sativa Japonica Group] g...   231   5e-59

>ref|XP_002531804.1| Root phototropism protein, putative [Ricinus communis]
           gi|223528538|gb|EEF30561.1| Root phototropism protein,
           putative [Ricinus communis]
          Length = 592

 Score =  244 bits (624), Expect = 4e-63
 Identities = 118/175 (67%), Positives = 138/175 (78%)
 Frame = +3

Query: 3   GKIRKMVADARDSNFSRVELRNFPGGPQIFELAAKFCYGSNFDINVANVSQLHCASSYLE 182
           GKIRKMVADA+DSN S++EL N PGGP  FELA KFCYG NF+I  ANV+ L CA+ YLE
Sbjct: 53  GKIRKMVADAKDSNISKLELHNLPGGPHTFELAMKFCYGMNFEITTANVAHLRCAAEYLE 112

Query: 183 MTEDYWEGNLITRTEAYLKDVVLQSLEKSVTVLSICETLPSIVDDLGIVNTCVDAIAMNA 362
           MTEDY E NLI RTE YL DVV+QSLEKSV VLS CE LP   +++GI N C++AIA+NA
Sbjct: 113 MTEDYREENLIERTEIYLNDVVVQSLEKSVEVLSTCEMLPPTAEEVGIPNRCIEAIAINA 172

Query: 363 SKEQLVLGLSRLDCDGGSGKLKTECTDWWIEDLSVLGIDFYQRVISALRRSGVHP 527
            KEQLV GLSRLDCD  S +LK+ C +WW+EDLS+L ID+YQRVI A+ R GV P
Sbjct: 173 CKEQLVSGLSRLDCDNESAELKSGCIEWWVEDLSILKIDYYQRVICAMGRLGVRP 227


>ref|XP_002323684.1| predicted protein [Populus trichocarpa] gi|222868314|gb|EEF05445.1|
           predicted protein [Populus trichocarpa]
          Length = 550

 Score =  233 bits (593), Expect = 2e-59
 Identities = 112/173 (64%), Positives = 135/173 (78%)
 Frame = +3

Query: 3   GKIRKMVADARDSNFSRVELRNFPGGPQIFELAAKFCYGSNFDINVANVSQLHCASSYLE 182
           GKIRKMVADA+DSN S++EL N PGGP  FELA KFCYG NF+I  ANV+ L CA+ YLE
Sbjct: 30  GKIRKMVADAKDSNISKLELCNLPGGPHTFELAMKFCYGMNFEITTANVAHLRCAAEYLE 89

Query: 183 MTEDYWEGNLITRTEAYLKDVVLQSLEKSVTVLSICETLPSIVDDLGIVNTCVDAIAMNA 362
           MTEDY E NLI RTE YL + V+ SLE+SV VL+ CE LP I +++GI N C++AIA+NA
Sbjct: 90  MTEDYREENLIARTETYLNEFVVHSLERSVEVLATCELLPPIAEEVGIPNRCIEAIAINA 149

Query: 363 SKEQLVLGLSRLDCDGGSGKLKTECTDWWIEDLSVLGIDFYQRVISALRRSGV 521
            KEQLV GLS LDC+  S +LK+ C +WW+EDLSVL ID+YQRVI A+R  GV
Sbjct: 150 CKEQLVSGLSHLDCNSESTELKSSCLEWWVEDLSVLRIDYYQRVICAMRSVGV 202


>ref|XP_002269960.2| PREDICTED: BTB/POZ domain-containing protein At3g08570-like isoform
           1 [Vitis vinifera]
          Length = 636

 Score =  232 bits (592), Expect = 2e-59
 Identities = 113/175 (64%), Positives = 136/175 (77%)
 Frame = +3

Query: 3   GKIRKMVADARDSNFSRVELRNFPGGPQIFELAAKFCYGSNFDINVANVSQLHCASSYLE 182
           GKIRKMVAD +DS+ S++E  N PGGP+ FELAAKFCYG NF+IN  NV+QL CA+ YLE
Sbjct: 86  GKIRKMVADVKDSSLSKLEFLNLPGGPRAFELAAKFCYGMNFEINTGNVAQLRCAAEYLE 145

Query: 183 MTEDYWEGNLITRTEAYLKDVVLQSLEKSVTVLSICETLPSIVDDLGIVNTCVDAIAMNA 362
           MTEDY E NLITR E YL +VV QSLEKSV VLS CE L  + +++GI + CVDAIA+NA
Sbjct: 146 MTEDYREENLITRAETYLNEVVTQSLEKSVEVLSSCEMLAPMAEEVGIPDKCVDAIALNA 205

Query: 363 SKEQLVLGLSRLDCDGGSGKLKTECTDWWIEDLSVLGIDFYQRVISALRRSGVHP 527
            KEQL  G SRLDCD G  +LK+   +WW+EDLSVL I+FYQRVI+A+  +GV P
Sbjct: 206 CKEQLASGFSRLDCDDGCAELKSGRLEWWVEDLSVLKIEFYQRVIAAMGGAGVQP 260


>emb|CBI31167.3| unnamed protein product [Vitis vinifera]
          Length = 493

 Score =  232 bits (592), Expect = 2e-59
 Identities = 113/175 (64%), Positives = 136/175 (77%)
 Frame = +3

Query: 3   GKIRKMVADARDSNFSRVELRNFPGGPQIFELAAKFCYGSNFDINVANVSQLHCASSYLE 182
           GKIRKMVAD +DS+ S++E  N PGGP+ FELAAKFCYG NF+IN  NV+QL CA+ YLE
Sbjct: 52  GKIRKMVADVKDSSLSKLEFLNLPGGPRAFELAAKFCYGMNFEINTGNVAQLRCAAEYLE 111

Query: 183 MTEDYWEGNLITRTEAYLKDVVLQSLEKSVTVLSICETLPSIVDDLGIVNTCVDAIAMNA 362
           MTEDY E NLITR E YL +VV QSLEKSV VLS CE L  + +++GI + CVDAIA+NA
Sbjct: 112 MTEDYREENLITRAETYLNEVVTQSLEKSVEVLSSCEMLAPMAEEVGIPDKCVDAIALNA 171

Query: 363 SKEQLVLGLSRLDCDGGSGKLKTECTDWWIEDLSVLGIDFYQRVISALRRSGVHP 527
            KEQL  G SRLDCD G  +LK+   +WW+EDLSVL I+FYQRVI+A+  +GV P
Sbjct: 172 CKEQLASGFSRLDCDDGCAELKSGRLEWWVEDLSVLKIEFYQRVIAAMGGAGVQP 226


>ref|NP_001066002.1| Os12g0117600 [Oryza sativa Japonica Group]
           gi|77552854|gb|ABA95650.1| transposon protein, putative,
           Mutator sub-class, expressed [Oryza sativa Japonica
           Group] gi|113648509|dbj|BAF29021.1| Os12g0117600 [Oryza
           sativa Japonica Group] gi|125578308|gb|EAZ19454.1|
           hypothetical protein OsJ_35017 [Oryza sativa Japonica
           Group]
          Length = 651

 Score =  231 bits (589), Expect = 5e-59
 Identities = 108/175 (61%), Positives = 139/175 (79%)
 Frame = +3

Query: 3   GKIRKMVADARDSNFSRVELRNFPGGPQIFELAAKFCYGSNFDINVANVSQLHCASSYLE 182
           G+IR+MVA+++D + S++EL N PGG   FELAAKFCYGSNF+IN  NV+ L C + YLE
Sbjct: 61  GRIRRMVAESKDPDLSKLELVNVPGGALAFELAAKFCYGSNFEINTVNVAHLRCIAEYLE 120

Query: 183 MTEDYWEGNLITRTEAYLKDVVLQSLEKSVTVLSICETLPSIVDDLGIVNTCVDAIAMNA 362
           MTE+Y E NLI RTE YL ++V+++L+KS+ VL  C+ L   V+D+G+V+ CVDAIAMNA
Sbjct: 121 MTEEYQEENLIVRTETYLNEIVVKNLDKSLEVLCACDGLDPTVEDVGLVDMCVDAIAMNA 180

Query: 363 SKEQLVLGLSRLDCDGGSGKLKTECTDWWIEDLSVLGIDFYQRVISALRRSGVHP 527
           SKEQLV GL+ L+CD GSGKL+  C DWW+EDLS L ID+YQRVI A+RR+GV P
Sbjct: 181 SKEQLVSGLAHLECDVGSGKLRMHCQDWWVEDLSALRIDYYQRVIVAMRRTGVRP 235


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