BLASTX nr result

ID: Coptis24_contig00037864 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00037864
         (291 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532371.1| conserved hypothetical protein [Ricinus comm...   112   4e-23
ref|XP_002307639.1| predicted protein [Populus trichocarpa] gi|2...   111   5e-23
ref|XP_002263743.1| PREDICTED: CDT1-like protein a, chloroplasti...   108   6e-22
emb|CBI37094.3| unnamed protein product [Vitis vinifera]              108   6e-22
ref|XP_002300782.1| predicted protein [Populus trichocarpa] gi|2...   103   2e-20

>ref|XP_002532371.1| conserved hypothetical protein [Ricinus communis]
           gi|223527927|gb|EEF30014.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 578

 Score =  112 bits (279), Expect = 4e-23
 Identities = 51/89 (57%), Positives = 69/89 (77%)
 Frame = +2

Query: 2   FELLAKFFDDMQSTYRLLKLKGTLRNFTNICPGVESLSDRRFSYEHLAQMKYVLPEAIEL 181
           +E+L++FFD + ST RL++LKG++   TNI P +E L+DRRF + HLAQMKY+LPEAIE+
Sbjct: 112 YEILSEFFDCLDSTIRLMRLKGSMPTLTNISPKIECLTDRRFDHGHLAQMKYILPEAIEI 171

Query: 182 KRVNVVDERTCCTKSDIEVMLLIDAVECD 268
            RV V DER+ C K D+ V L +DA+ECD
Sbjct: 172 TRVLVFDERSSCMKPDLHVSLNVDAIECD 200


>ref|XP_002307639.1| predicted protein [Populus trichocarpa] gi|222857088|gb|EEE94635.1|
           predicted protein [Populus trichocarpa]
          Length = 564

 Score =  111 bits (278), Expect = 5e-23
 Identities = 51/97 (52%), Positives = 77/97 (79%), Gaps = 1/97 (1%)
 Frame = +2

Query: 2   FELLAKFFDDMQSTYRLLKLKGTLRNFTNICPGVESLSDRRFSYEHLAQMKYVLPEAIEL 181
           +E+L +FFD++ S+ RLL++KG++  F+NI P +ESL+DRRF+++HLAQ+KY++PEAIE+
Sbjct: 119 YEMLGEFFDNLDSSIRLLRMKGSMSTFSNISPKIESLTDRRFTHKHLAQLKYIMPEAIEI 178

Query: 182 KRVNVVDERTCCTKSDIEVMLLIDAVEC-DGKGKIGS 289
           KRV   DE+T C K D++V +  DA++C DGK K  S
Sbjct: 179 KRVLKFDEQTSCMKPDLQVTVNADAIQCDDGKLKTES 215


>ref|XP_002263743.1| PREDICTED: CDT1-like protein a, chloroplastic-like [Vitis vinifera]
          Length = 646

 Score =  108 bits (269), Expect = 6e-22
 Identities = 48/87 (55%), Positives = 70/87 (80%)
 Frame = +2

Query: 2   FELLAKFFDDMQSTYRLLKLKGTLRNFTNICPGVESLSDRRFSYEHLAQMKYVLPEAIEL 181
           +E+LA+FFD + S+ RLL+LKG++  FTNICP +E L+DRRFS+ +LAQ+KY+LPEAI +
Sbjct: 179 YEMLAQFFDSLDSSIRLLRLKGSMSTFTNICPKIECLTDRRFSHGNLAQLKYILPEAIVI 238

Query: 182 KRVNVVDERTCCTKSDIEVMLLIDAVE 262
           K+V ++DERT C K D+ + L +D +E
Sbjct: 239 KKVLMLDERTSCMKPDLLITLDVDGIE 265


>emb|CBI37094.3| unnamed protein product [Vitis vinifera]
          Length = 618

 Score =  108 bits (269), Expect = 6e-22
 Identities = 48/87 (55%), Positives = 70/87 (80%)
 Frame = +2

Query: 2   FELLAKFFDDMQSTYRLLKLKGTLRNFTNICPGVESLSDRRFSYEHLAQMKYVLPEAIEL 181
           +E+LA+FFD + S+ RLL+LKG++  FTNICP +E L+DRRFS+ +LAQ+KY+LPEAI +
Sbjct: 186 YEMLAQFFDSLDSSIRLLRLKGSMSTFTNICPKIECLTDRRFSHGNLAQLKYILPEAIVI 245

Query: 182 KRVNVVDERTCCTKSDIEVMLLIDAVE 262
           K+V ++DERT C K D+ + L +D +E
Sbjct: 246 KKVLMLDERTSCMKPDLLITLDVDGIE 272


>ref|XP_002300782.1| predicted protein [Populus trichocarpa] gi|222842508|gb|EEE80055.1|
           predicted protein [Populus trichocarpa]
          Length = 376

 Score =  103 bits (256), Expect = 2e-20
 Identities = 47/94 (50%), Positives = 73/94 (77%)
 Frame = +2

Query: 8   LLAKFFDDMQSTYRLLKLKGTLRNFTNICPGVESLSDRRFSYEHLAQMKYVLPEAIELKR 187
           +L + FD++ S+ RLL++KG++  F+NI P +ESL+DRRF+++HLAQ+KY++PEAIE+KR
Sbjct: 1   MLGELFDNLDSSIRLLRMKGSMSTFSNISPKIESLTDRRFTHKHLAQLKYIMPEAIEIKR 60

Query: 188 VNVVDERTCCTKSDIEVMLLIDAVECDGKGKIGS 289
           V   +E+T C K ++ V +  DA+ECD  GK+ S
Sbjct: 61  VLRFNEQTSCMKPELHVTVNADAIECD-DGKLKS 93


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