BLASTX nr result

ID: Coptis24_contig00037861 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00037861
         (298 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510535.1| conserved hypothetical protein [Ricinus comm...    66   3e-09
ref|XP_002279957.2| PREDICTED: uncharacterized protein LOC100259...    63   2e-08
ref|XP_002306928.1| predicted protein [Populus trichocarpa] gi|2...    59   5e-07
gb|ABK94224.1| unknown [Populus trichocarpa]                           57   1e-06
ref|XP_002301978.1| predicted protein [Populus trichocarpa] gi|2...    55   6e-06

>ref|XP_002510535.1| conserved hypothetical protein [Ricinus communis]
           gi|223551236|gb|EEF52722.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 354

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 40/99 (40%), Positives = 62/99 (62%)
 Frame = +1

Query: 1   VTQWKKKVLEEEMGRNVEIAKSELFVSLKQREALLFKLKLEHAESDLSDFRLGFDYLTHE 180
           ++Q    ++E+++   ++ AKS L + LK REA L+KLKLE  E +L+DFR  F+YL+  
Sbjct: 59  ISQMNDALMEKDLNCLLQAAKSNLMLGLKHREASLYKLKLEQTEDELADFRSCFNYLSQI 118

Query: 181 LSEKNEKSQVIYKNQRNVKDGKDGREVKSKILESEVKRL 297
           L E  ++S    K +  V+D  + R   SK L++EVKRL
Sbjct: 119 LEENPKESD---KCKEGVED-SNLRSSGSKRLDNEVKRL 153


>ref|XP_002279957.2| PREDICTED: uncharacterized protein LOC100259217 [Vitis vinifera]
           gi|302142661|emb|CBI19864.3| unnamed protein product
           [Vitis vinifera]
          Length = 379

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 42/107 (39%), Positives = 62/107 (57%), Gaps = 8/107 (7%)
 Frame = +1

Query: 1   VTQWKKKVLEEEMGRNVEIAKSELFVSLKQREALLFKLKLEHAESDLSDFRLGFDYLTHE 180
           + Q + K   +E  R VE AKS+L + LK+RE  L KLKLE  + +L DF++  D+L+HE
Sbjct: 66  IAQMEMKFTVQEKERLVEAAKSDLLMGLKKREVSLCKLKLESTDDELVDFKVLIDFLSHE 125

Query: 181 LSEKNEKSQVIYK--------NQRNVKDGKDGREVKSKILESEVKRL 297
             + N  S+V  K        N ++VK  K+  E  +K LE EV++L
Sbjct: 126 CLDPNGISKVGDKEKGSRGDNNLKSVKTTKE-EEQCAKRLEGEVRKL 171


>ref|XP_002306928.1| predicted protein [Populus trichocarpa] gi|222856377|gb|EEE93924.1|
           predicted protein [Populus trichocarpa]
          Length = 357

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 37/101 (36%), Positives = 59/101 (58%), Gaps = 2/101 (1%)
 Frame = +1

Query: 1   VTQWKKKVLEEEMGRNVEIAKSELFVSLKQREALLFKLKLEHAESDLSDFRLGFDYLTHE 180
           ++Q    ++E++M   +E AKS+L + LKQREA L K +LE  E +L+DF+  F YL+  
Sbjct: 67  ISQINGDLVEKDMACVLEAAKSDLMLGLKQREASLHKSRLEETEDELADFQAWFSYLSQN 126

Query: 181 LSEKNEKSQVIYKNQRNVKDG--KDGREVKSKILESEVKRL 297
           L   +E++        N K G   D +   +K LE++V+RL
Sbjct: 127 LKANSEET-------ANGKGGGSSDMKSGGAKKLEAKVERL 160


>gb|ABK94224.1| unknown [Populus trichocarpa]
          Length = 357

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 37/101 (36%), Positives = 58/101 (57%), Gaps = 2/101 (1%)
 Frame = +1

Query: 1   VTQWKKKVLEEEMGRNVEIAKSELFVSLKQREALLFKLKLEHAESDLSDFRLGFDYLTHE 180
           ++Q     +E++M   +E AKS+L + LKQREA L K +LE  E +L+DF+  F YL+  
Sbjct: 67  ISQINGDSVEKDMACVLEAAKSDLMLGLKQREASLHKSRLEETEDELADFQAWFSYLSQN 126

Query: 181 LSEKNEKSQVIYKNQRNVKDG--KDGREVKSKILESEVKRL 297
           L   +E++        N K G   D +   +K LE++V+RL
Sbjct: 127 LKANSEET-------ANGKGGGSSDMKSGGAKKLEAKVERL 160


>ref|XP_002301978.1| predicted protein [Populus trichocarpa] gi|222843704|gb|EEE81251.1|
           predicted protein [Populus trichocarpa]
          Length = 277

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 33/83 (39%), Positives = 48/83 (57%)
 Frame = +1

Query: 49  VEIAKSELFVSLKQREALLFKLKLEHAESDLSDFRLGFDYLTHELSEKNEKSQVIYKNQR 228
           +E AK +L + LKQRE  L KLKLE  E +L+DF+  F YL+  L E +E++        
Sbjct: 5   LEAAKGDLMLGLKQREVSLHKLKLEQTEDELADFQALFGYLSQSLKENSEETA-----NG 59

Query: 229 NVKDGKDGREVKSKILESEVKRL 297
                 D +  ++K LE+EV+RL
Sbjct: 60  KGPGHSDLKSGEAKKLEAEVERL 82


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