BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00037829
         (289 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADD52202.1| ubiquitin [Catharanthus roseus] gi|341869050|gb|A...   111   5e-23
gb|EJW81643.1| ubiquitin/40S ribosomal protein S27a fusion prote...   110   1e-22
dbj|BAC80055.1| putative ubiquitin / ribosomal protein CEP52 [Or...   110   2e-22
ref|XP_002891806.1| predicted protein [Arabidopsis lyrata subsp....   110   2e-22
ref|NP_001059668.2| Os07g0489500 [Oryza sativa Japonica Group] g...   110   2e-22

>gb|ADD52202.1| ubiquitin [Catharanthus roseus] gi|341869050|gb|AEK98798.1|
           ubiquitin [Carthamus tinctorius]
          Length = 381

 Score =  111 bits (278), Expect = 5e-23
 Identities = 54/75 (72%), Positives = 63/75 (84%)
 Frame = +2

Query: 2   EILVKTYTGKAITIEVQSSDTAAILKTKIQDKEGIPPDQQKLAFAGKRLEDGQTLADCNI 181
           +I VKT TGK IT+EV+SSDT   +K KIQDKEGIPPDQQ+L FAGK+LEDG+TLADCNI
Sbjct: 78  QIFVKTLTGKTITLEVESSDTTDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADCNI 137

Query: 182 QNGSVVFLILRLRGG 226
           Q  S + L+LRLRGG
Sbjct: 138 QKESTLHLVLRLRGG 152



 Score =  107 bits (266), Expect = 1e-21
 Identities = 53/75 (70%), Positives = 62/75 (82%)
 Frame = +2

Query: 2   EILVKTYTGKAITIEVQSSDTAAILKTKIQDKEGIPPDQQKLAFAGKRLEDGQTLADCNI 181
           +I VKT TGK IT+EV+SSDT   +K KIQDKEGIPPDQQ+L FAGK+LEDG+TLAD NI
Sbjct: 154 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 213

Query: 182 QNGSVVFLILRLRGG 226
           Q  S + L+LRLRGG
Sbjct: 214 QKESTLHLVLRLRGG 228



 Score =  107 bits (266), Expect = 1e-21
 Identities = 53/75 (70%), Positives = 62/75 (82%)
 Frame = +2

Query: 2   EILVKTYTGKAITIEVQSSDTAAILKTKIQDKEGIPPDQQKLAFAGKRLEDGQTLADCNI 181
           +I VKT TGK IT+EV+SSDT   +K KIQDKEGIPPDQQ+L FAGK+LEDG+TLAD NI
Sbjct: 230 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 289

Query: 182 QNGSVVFLILRLRGG 226
           Q  S + L+LRLRGG
Sbjct: 290 QKESTLHLVLRLRGG 304



 Score =  105 bits (261), Expect = 5e-21
 Identities = 52/75 (69%), Positives = 61/75 (81%)
 Frame = +2

Query: 2   EILVKTYTGKAITIEVQSSDTAAILKTKIQDKEGIPPDQQKLAFAGKRLEDGQTLADCNI 181
           +I VKT TGK IT+EV+SSDT   +K K QDKEGIPPDQQ+L FAGK+LEDG+TLAD NI
Sbjct: 2   QIFVKTLTGKTITLEVESSDTIDNVKAKTQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 61

Query: 182 QNGSVVFLILRLRGG 226
           Q  S + L+LRLRGG
Sbjct: 62  QKESTLHLVLRLRGG 76



 Score =  104 bits (260), Expect = 7e-21
 Identities = 52/75 (69%), Positives = 61/75 (81%)
 Frame = +2

Query: 2   EILVKTYTGKAITIEVQSSDTAAILKTKIQDKEGIPPDQQKLAFAGKRLEDGQTLADCNI 181
           +I VKT TGK IT+EV+SSDT   +K KIQDKEGIPPDQQ+L  AGK+LEDG+TLAD NI
Sbjct: 306 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLILAGKQLEDGRTLADYNI 365

Query: 182 QNGSVVFLILRLRGG 226
           Q  S + L+LRLRGG
Sbjct: 366 QKESTLHLVLRLRGG 380


>gb|EJW81643.1| ubiquitin/40S ribosomal protein S27a fusion protein [Wuchereria
           bancrofti]
          Length = 162

 Score =  110 bits (275), Expect = 1e-22
 Identities = 54/76 (71%), Positives = 64/76 (84%)
 Frame = +2

Query: 2   EILVKTYTGKAITIEVQSSDTAAILKTKIQDKEGIPPDQQKLAFAGKRLEDGQTLADCNI 181
           +I VKT TGK IT+EV+SSDT   +KTKIQDKEGIPPDQQ+L FAGK+LEDG+TL+D NI
Sbjct: 2   QIFVKTLTGKTITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 61

Query: 182 QNGSVVFLILRLRGGG 229
           Q  S + L+LRLRGGG
Sbjct: 62  QKESTLHLVLRLRGGG 77


>dbj|BAC80055.1| putative ubiquitin / ribosomal protein CEP52 [Oryza sativa Japonica
           Group] gi|50508773|dbj|BAD31532.1| putative ubiquitin /
           ribosomal protein CEP52 [Oryza sativa Japonica Group]
          Length = 143

 Score =  110 bits (274), Expect = 2e-22
 Identities = 55/80 (68%), Positives = 64/80 (80%)
 Frame = +2

Query: 2   EILVKTYTGKAITIEVQSSDTAAILKTKIQDKEGIPPDQQKLAFAGKRLEDGQTLADCNI 181
           +I VKT TGK IT+EV+SSDT   +K KIQDKEGIPPDQQ+L FAGK+LEDG+TLAD NI
Sbjct: 2   QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 61

Query: 182 QNGSVVFLILRLRGGGNTLY 241
           Q  S + L+LRLRGGG   Y
Sbjct: 62  QKESTLHLVLRLRGGGRPGY 81


>ref|XP_002891806.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297337648|gb|EFH68065.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 384

 Score =  110 bits (274), Expect = 2e-22
 Identities = 55/75 (73%), Positives = 63/75 (84%)
 Frame = +2

Query: 2   EILVKTYTGKAITIEVQSSDTAAILKTKIQDKEGIPPDQQKLAFAGKRLEDGQTLADCNI 181
           +I VKT TGK IT+EV+SSDT   LKTKIQDKEGIPPDQQ+L FAGK+LEDG+TLAD NI
Sbjct: 232 QIFVKTLTGKTITLEVESSDTIDNLKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 291

Query: 182 QNGSVVFLILRLRGG 226
           Q  S + L+LRLRGG
Sbjct: 292 QKESTLHLVLRLRGG 306



 Score =  107 bits (266), Expect = 1e-21
 Identities = 53/75 (70%), Positives = 62/75 (82%)
 Frame = +2

Query: 2   EILVKTYTGKAITIEVQSSDTAAILKTKIQDKEGIPPDQQKLAFAGKRLEDGQTLADCNI 181
           +I VKT TGK IT+EV+SSDT   +K KIQDKEGIPPDQQ+L FAGK+LEDG+TLAD NI
Sbjct: 156 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 215

Query: 182 QNGSVVFLILRLRGG 226
           Q  S + L+LRLRGG
Sbjct: 216 QKESTLHLVLRLRGG 230



 Score =  107 bits (266), Expect = 1e-21
 Identities = 53/75 (70%), Positives = 62/75 (82%)
 Frame = +2

Query: 2   EILVKTYTGKAITIEVQSSDTAAILKTKIQDKEGIPPDQQKLAFAGKRLEDGQTLADCNI 181
           +I VKT TGK IT+EV+SSDT   +K KIQDKEGIPPDQQ+L FAGK+LEDG+TLAD NI
Sbjct: 308 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 367

Query: 182 QNGSVVFLILRLRGG 226
           Q  S + L+LRLRGG
Sbjct: 368 QKESTLHLVLRLRGG 382



 Score =  106 bits (265), Expect = 2e-21
 Identities = 52/75 (69%), Positives = 62/75 (82%)
 Frame = +2

Query: 2   EILVKTYTGKAITIEVQSSDTAAILKTKIQDKEGIPPDQQKLAFAGKRLEDGQTLADCNI 181
           +I +KT TGK IT+EV+SSDT   +K KIQDKEGIPPDQQ+L FAGK+LEDG+TLAD NI
Sbjct: 80  QIFIKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 139

Query: 182 QNGSVVFLILRLRGG 226
           Q  S + L+LRLRGG
Sbjct: 140 QKESTLHLVLRLRGG 154



 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 45/75 (60%), Positives = 57/75 (76%)
 Frame = +2

Query: 2   EILVKTYTGKAITIEVQSSDTAAILKTKIQDKEGIPPDQQKLAFAGKRLEDGQTLADCNI 181
           +I  KT T K IT++V+SSDT   +K KIQD EGIP DQQ+L F+GK L+DG+TLAD +I
Sbjct: 4   QIYAKTLTEKTITLDVESSDTINNVKAKIQDIEGIPLDQQRLIFSGKLLDDGRTLADYSI 63

Query: 182 QNGSVVFLILRLRGG 226
           Q  S++ L LRLRGG
Sbjct: 64  QKESILHLALRLRGG 78


>ref|NP_001059668.2| Os07g0489500 [Oryza sativa Japonica Group]
           gi|255677773|dbj|BAF21582.2| Os07g0489500 [Oryza sativa
           Japonica Group]
          Length = 135

 Score =  110 bits (274), Expect = 2e-22
 Identities = 55/80 (68%), Positives = 64/80 (80%)
 Frame = +2

Query: 2   EILVKTYTGKAITIEVQSSDTAAILKTKIQDKEGIPPDQQKLAFAGKRLEDGQTLADCNI 181
           +I VKT TGK IT+EV+SSDT   +K KIQDKEGIPPDQQ+L FAGK+LEDG+TLAD NI
Sbjct: 2   QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 61

Query: 182 QNGSVVFLILRLRGGGNTLY 241
           Q  S + L+LRLRGGG   Y
Sbjct: 62  QKESTLHLVLRLRGGGRPGY 81