BLASTX nr result

ID: Coptis24_contig00037823 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00037823
         (606 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315300.1| p-aminobenzoate synthase [Populus trichocarp...   261   9e-68
ref|XP_002274386.2| PREDICTED: para-aminobenzoate synthase-like ...   255   4e-66
emb|CBI31472.3| unnamed protein product [Vitis vinifera]              255   4e-66
ref|XP_002529570.1| p-aminobenzoate synthase, putative [Ricinus ...   250   1e-64
emb|CAN73645.1| hypothetical protein VITISV_025570 [Vitis vinifera]   244   1e-62

>ref|XP_002315300.1| p-aminobenzoate synthase [Populus trichocarpa]
            gi|222864340|gb|EEF01471.1| p-aminobenzoate synthase
            [Populus trichocarpa]
          Length = 928

 Score =  261 bits (666), Expect = 9e-68
 Identities = 127/194 (65%), Positives = 150/194 (77%)
 Frame = +3

Query: 24   ESSTRNSWLDNTEQKLLCLKASESKKFKEQMSGSAALAPNEGGFLADKTRDQYVEDVKKC 203
            ES+T   WLD+TE KLLCL+AS ++K  EQ S +A  +P + GFL +K+R+QY++DV KC
Sbjct: 610  ESTTSIPWLDDTENKLLCLEASTTRKLGEQASPTATFSPYKAGFLGEKSREQYIKDVSKC 669

Query: 204  LKFIKDGESYELCLTTQIRKKIEDIDKITLYIALREKNPAPYAAWLNFSKENLCICCSSP 383
            L++IKDGESYELCLT+Q+RK + +ID + LY+ LREKNPAPYAAWLNFS E+LCICCSSP
Sbjct: 670  LEYIKDGESYELCLTSQMRKTVGEIDSLGLYLHLREKNPAPYAAWLNFSNEDLCICCSSP 729

Query: 384  ERFLRLDRNDSLEAKPIKGTIARGSTXXXXXXXXXXXXXXXXXXAENLMIVDLLRNDLGR 563
            ERFL LDRN  LEAKPIKGTIARG T                  AENLMIVDLLRNDLGR
Sbjct: 730  ERFLCLDRNGILEAKPIKGTIARGVTLEEDEELKLKLQYSEKDQAENLMIVDLLRNDLGR 789

Query: 564  ICEPGSVHVPRLME 605
            +CEPGSVHVP LME
Sbjct: 790  VCEPGSVHVPHLME 803


>ref|XP_002274386.2| PREDICTED: para-aminobenzoate synthase-like [Vitis vinifera]
          Length = 909

 Score =  255 bits (652), Expect = 4e-66
 Identities = 126/187 (67%), Positives = 146/187 (78%)
 Frame = +3

Query: 45   WLDNTEQKLLCLKASESKKFKEQMSGSAALAPNEGGFLADKTRDQYVEDVKKCLKFIKDG 224
            WLD+TEQKLL LKAS +KKFK +       +P++ GF A+K+R+QY++DV+KCLK IKDG
Sbjct: 589  WLDDTEQKLLGLKASAAKKFKVESPQPVTHSPSKAGFFAEKSREQYMKDVEKCLKLIKDG 648

Query: 225  ESYELCLTTQIRKKIEDIDKITLYIALREKNPAPYAAWLNFSKENLCICCSSPERFLRLD 404
            ESYELCLTTQ+RK+I  ID + LY+ LREKNPAPYAAWLNFSKENLCICCSSPERFL+LD
Sbjct: 649  ESYELCLTTQMRKRIGQIDYLGLYLNLREKNPAPYAAWLNFSKENLCICCSSPERFLQLD 708

Query: 405  RNDSLEAKPIKGTIARGSTXXXXXXXXXXXXXXXXXXAENLMIVDLLRNDLGRICEPGSV 584
             N  LEAKPIKGTIARG T                  AENLMIVDLLRNDLGR+CEPGS+
Sbjct: 709  GNGILEAKPIKGTIARGLTKEEDEHLKLQLQYSEKDQAENLMIVDLLRNDLGRVCEPGSI 768

Query: 585  HVPRLME 605
            HVP LM+
Sbjct: 769  HVPCLMD 775


>emb|CBI31472.3| unnamed protein product [Vitis vinifera]
          Length = 853

 Score =  255 bits (652), Expect = 4e-66
 Identities = 126/187 (67%), Positives = 146/187 (78%)
 Frame = +3

Query: 45   WLDNTEQKLLCLKASESKKFKEQMSGSAALAPNEGGFLADKTRDQYVEDVKKCLKFIKDG 224
            WLD+TEQKLL LKAS +KKFK +       +P++ GF A+K+R+QY++DV+KCLK IKDG
Sbjct: 533  WLDDTEQKLLGLKASAAKKFKVESPQPVTHSPSKAGFFAEKSREQYMKDVEKCLKLIKDG 592

Query: 225  ESYELCLTTQIRKKIEDIDKITLYIALREKNPAPYAAWLNFSKENLCICCSSPERFLRLD 404
            ESYELCLTTQ+RK+I  ID + LY+ LREKNPAPYAAWLNFSKENLCICCSSPERFL+LD
Sbjct: 593  ESYELCLTTQMRKRIGQIDYLGLYLNLREKNPAPYAAWLNFSKENLCICCSSPERFLQLD 652

Query: 405  RNDSLEAKPIKGTIARGSTXXXXXXXXXXXXXXXXXXAENLMIVDLLRNDLGRICEPGSV 584
             N  LEAKPIKGTIARG T                  AENLMIVDLLRNDLGR+CEPGS+
Sbjct: 653  GNGILEAKPIKGTIARGLTKEEDEHLKLQLQYSEKDQAENLMIVDLLRNDLGRVCEPGSI 712

Query: 585  HVPRLME 605
            HVP LM+
Sbjct: 713  HVPCLMD 719


>ref|XP_002529570.1| p-aminobenzoate synthase, putative [Ricinus communis]
            gi|223530946|gb|EEF32804.1| p-aminobenzoate synthase,
            putative [Ricinus communis]
          Length = 914

 Score =  250 bits (639), Expect = 1e-64
 Identities = 122/192 (63%), Positives = 146/192 (76%)
 Frame = +3

Query: 30   STRNSWLDNTEQKLLCLKASESKKFKEQMSGSAALAPNEGGFLADKTRDQYVEDVKKCLK 209
            +T   WLD+ EQKLL L+AS ++K  +Q S SA+ + +  GFLA+ +R+QY+ +V KCL 
Sbjct: 598  ATNTQWLDDVEQKLLHLEASAARKLGQQTSQSASFSSSNAGFLAETSREQYISNVNKCLG 657

Query: 210  FIKDGESYELCLTTQIRKKIEDIDKITLYIALREKNPAPYAAWLNFSKENLCICCSSPER 389
            +IKDGESYELCLTTQ+RK++ DID + LY+ LREKNPAPYAAWLNFS + LCICCSSPER
Sbjct: 658  YIKDGESYELCLTTQMRKRVGDIDSLGLYLHLREKNPAPYAAWLNFSSDKLCICCSSPER 717

Query: 390  FLRLDRNDSLEAKPIKGTIARGSTXXXXXXXXXXXXXXXXXXAENLMIVDLLRNDLGRIC 569
            FLRLDR+  LEAKPIKGTIARGST                  AENLMIVDLLRNDLGR+C
Sbjct: 718  FLRLDRDGILEAKPIKGTIARGSTPEKDEQLKLQLQHSEKDQAENLMIVDLLRNDLGRVC 777

Query: 570  EPGSVHVPRLME 605
             PGSVHVP LM+
Sbjct: 778  IPGSVHVPNLMD 789


>emb|CAN73645.1| hypothetical protein VITISV_025570 [Vitis vinifera]
          Length = 919

 Score =  244 bits (622), Expect = 1e-62
 Identities = 122/200 (61%), Positives = 149/200 (74%)
 Frame = +3

Query: 6    STGTPCESSTRNSWLDNTEQKLLCLKASESKKFKEQMSGSAALAPNEGGFLADKTRDQYV 185
            ST TP       +WLD TE++LL LKAS++ K +  MS +A L+P+E GFLADK+ +QY+
Sbjct: 584  STATP-------AWLDETEKRLLGLKASDTNKSEVSMSLTATLSPSEAGFLADKSMEQYM 636

Query: 186  EDVKKCLKFIKDGESYELCLTTQIRKKIEDIDKITLYIALREKNPAPYAAWLNFSKENLC 365
            +DVK+CL+FIKDGESYELCLT+Q+RK+I ++D +  Y+ LREKNPAP+AAWLNF KE LC
Sbjct: 637  KDVKQCLQFIKDGESYELCLTSQLRKRIGEMDLLXFYLHLREKNPAPFAAWLNFPKEKLC 696

Query: 366  ICCSSPERFLRLDRNDSLEAKPIKGTIARGSTXXXXXXXXXXXXXXXXXXAENLMIVDLL 545
            IC SSPERFL+LD N  LEAKPIKGT+ RGS                   AENLMIVDLL
Sbjct: 697  ICSSSPERFLKLDENGMLEAKPIKGTVPRGSAKEADEQLKQKLQCSEKDQAENLMIVDLL 756

Query: 546  RNDLGRICEPGSVHVPRLME 605
            RNDLGR+CE GSVHVP LM+
Sbjct: 757  RNDLGRVCEVGSVHVPLLMD 776


Top