BLASTX nr result

ID: Coptis24_contig00037816 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00037816
         (309 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19327.3| unnamed protein product [Vitis vinifera]              131   5e-29
ref|XP_002283609.1| PREDICTED: multidrug and toxin extrusion pro...   131   5e-29
ref|XP_003615399.1| Multidrug and toxin extrusion protein [Medic...   130   1e-28
ref|XP_002510003.1| multidrug resistance pump, putative [Ricinus...   129   2e-28
ref|XP_002301101.1| predicted protein [Populus trichocarpa] gi|2...   129   3e-28

>emb|CBI19327.3| unnamed protein product [Vitis vinifera]
          Length = 576

 Score =  131 bits (330), Expect = 5e-29
 Identities = 69/101 (68%), Positives = 73/101 (72%)
 Frame = +2

Query: 5   VEEIKEIGKISGPTALTGLVLYSRAMISMLFLGYXXXXXXXXXXXXIGFANITGYSVISG 184
           +EEIK IGKISGPTA+TGL+LYSRAMISMLFLGY            IGFANITGYSVISG
Sbjct: 23  LEEIKAIGKISGPTAVTGLLLYSRAMISMLFLGYLGELELAGGSLSIGFANITGYSVISG 82

Query: 185 LAMGMEPICGQAFGAKQWKXXXXXXXXXXXXXXSASIPISF 307
           LAMGMEPICGQA+GAKQWK              S SIPISF
Sbjct: 83  LAMGMEPICGQAYGAKQWKLLGLTLQRTVLLLLSTSIPISF 123


>ref|XP_002283609.1| PREDICTED: multidrug and toxin extrusion protein 1 [Vitis vinifera]
           gi|147802486|emb|CAN77415.1| hypothetical protein
           VITISV_000475 [Vitis vinifera]
          Length = 527

 Score =  131 bits (330), Expect = 5e-29
 Identities = 69/101 (68%), Positives = 73/101 (72%)
 Frame = +2

Query: 5   VEEIKEIGKISGPTALTGLVLYSRAMISMLFLGYXXXXXXXXXXXXIGFANITGYSVISG 184
           +EEIK IGKISGPTA+TGL+LYSRAMISMLFLGY            IGFANITGYSVISG
Sbjct: 23  LEEIKAIGKISGPTAVTGLLLYSRAMISMLFLGYLGELELAGGSLSIGFANITGYSVISG 82

Query: 185 LAMGMEPICGQAFGAKQWKXXXXXXXXXXXXXXSASIPISF 307
           LAMGMEPICGQA+GAKQWK              S SIPISF
Sbjct: 83  LAMGMEPICGQAYGAKQWKLLGLTLQRTVLLLLSTSIPISF 123


>ref|XP_003615399.1| Multidrug and toxin extrusion protein [Medicago truncatula]
           gi|355516734|gb|AES98357.1| Multidrug and toxin
           extrusion protein [Medicago truncatula]
          Length = 560

 Score =  130 bits (327), Expect = 1e-28
 Identities = 67/101 (66%), Positives = 72/101 (71%)
 Frame = +2

Query: 5   VEEIKEIGKISGPTALTGLVLYSRAMISMLFLGYXXXXXXXXXXXXIGFANITGYSVISG 184
           + EIKEIGKISGPT +TGL+LYSRAMISM+FLGY            IGFANITGYSVISG
Sbjct: 54  ITEIKEIGKISGPTTITGLLLYSRAMISMIFLGYLGEMELAGGSLSIGFANITGYSVISG 113

Query: 185 LAMGMEPICGQAFGAKQWKXXXXXXXXXXXXXXSASIPISF 307
           LAMGMEPICGQA+GAKQWK              S SIPISF
Sbjct: 114 LAMGMEPICGQAYGAKQWKILGLTLQRTVLLLLSTSIPISF 154


>ref|XP_002510003.1| multidrug resistance pump, putative [Ricinus communis]
           gi|223550704|gb|EEF52190.1| multidrug resistance pump,
           putative [Ricinus communis]
          Length = 528

 Score =  129 bits (324), Expect = 2e-28
 Identities = 68/102 (66%), Positives = 73/102 (71%)
 Frame = +2

Query: 2   VVEEIKEIGKISGPTALTGLVLYSRAMISMLFLGYXXXXXXXXXXXXIGFANITGYSVIS 181
           V+EEIK IGKISGPTA+TGL+LYSRAMISMLFLGY            IGFANITGYSVIS
Sbjct: 21  VLEEIKAIGKISGPTAITGLILYSRAMISMLFLGYLGELELAGGSLSIGFANITGYSVIS 80

Query: 182 GLAMGMEPICGQAFGAKQWKXXXXXXXXXXXXXXSASIPISF 307
           GLAMGMEPICGQA+GAKQ K              S S+PISF
Sbjct: 81  GLAMGMEPICGQAYGAKQMKFLGLTLQRTVLLLLSTSVPISF 122


>ref|XP_002301101.1| predicted protein [Populus trichocarpa] gi|222842827|gb|EEE80374.1|
           predicted protein [Populus trichocarpa]
          Length = 528

 Score =  129 bits (323), Expect = 3e-28
 Identities = 66/101 (65%), Positives = 72/101 (71%)
 Frame = +2

Query: 5   VEEIKEIGKISGPTALTGLVLYSRAMISMLFLGYXXXXXXXXXXXXIGFANITGYSVISG 184
           ++EIKEI KISGPTA+TGLVLYSRAMISMLFLGY            IGFANITGYSV+SG
Sbjct: 23  LQEIKEIAKISGPTAMTGLVLYSRAMISMLFLGYLGELELAGGSLSIGFANITGYSVLSG 82

Query: 185 LAMGMEPICGQAFGAKQWKXXXXXXXXXXXXXXSASIPISF 307
           LAMGMEPICGQA+GAK WK              S S+PISF
Sbjct: 83  LAMGMEPICGQAYGAKHWKILGLTLQRTVLLLLSTSVPISF 123


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