BLASTX nr result

ID: Coptis24_contig00037801 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00037801
         (346 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19895.3| unnamed protein product [Vitis vinifera]              139   3e-31
ref|XP_002279563.1| PREDICTED: receptor protein kinase CLAVATA1-...   139   3e-31
ref|XP_002307734.1| predicted protein [Populus trichocarpa] gi|2...   136   2e-30
gb|AAB58929.1| CLV1 receptor kinase [Arabidopsis thaliana]            133   1e-29
gb|AAD02501.1| receptor kinase [Arabidopsis thaliana]                 133   1e-29

>emb|CBI19895.3| unnamed protein product [Vitis vinifera]
          Length = 809

 Score =  139 bits (349), Expect = 3e-31
 Identities = 64/114 (56%), Positives = 88/114 (77%), Gaps = 1/114 (0%)
 Frame = +3

Query: 6   GSELEDWTFSSSAI-SHCSFTGILCDENSRVISLNISFRSFHGSIPPEVGLLSNLINLTM 182
           GS LEDW   SS++  HCSF+G+ CDE+SRV+SLN+SF +  GSIPPE+G+L+ L+NLT+
Sbjct: 42  GSGLEDWVDDSSSLFPHCSFSGVSCDEDSRVVSLNLSFVTLFGSIPPEIGMLNKLVNLTL 101

Query: 183 SSNELSGKLPLELTALTSLKVFNVSNNTLSGEFPELFASAFQNLEVLDIYNNNF 344
           + + L+GKLP+E+  LTSLK+ N+SNN  +G+FP       + LEVLD+YNNNF
Sbjct: 102 ACDNLTGKLPMEMAKLTSLKLVNLSNNNFNGQFPGRILVGMKELEVLDMYNNNF 155



 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 32/79 (40%), Positives = 50/79 (63%)
 Frame = +3

Query: 102 LNISFRSFHGSIPPEVGLLSNLINLTMSSNELSGKLPLELTALTSLKVFNVSNNTLSGEF 281
           L++   +  G IPP +G L  L +L +  N+LSG LP EL+ L +LK  ++SNN L+GE 
Sbjct: 245 LDLGSCNLTGEIPPSLGRLKMLHSLFLQLNQLSGHLPQELSGLVNLKSLDLSNNVLTGEI 304

Query: 282 PELFASAFQNLEVLDIYNN 338
           PE F S  + L +++++ N
Sbjct: 305 PESF-SQLRELTLINLFGN 322


>ref|XP_002279563.1| PREDICTED: receptor protein kinase CLAVATA1-like [Vitis vinifera]
          Length = 984

 Score =  139 bits (349), Expect = 3e-31
 Identities = 64/114 (56%), Positives = 88/114 (77%), Gaps = 1/114 (0%)
 Frame = +3

Query: 6   GSELEDWTFSSSAI-SHCSFTGILCDENSRVISLNISFRSFHGSIPPEVGLLSNLINLTM 182
           GS LEDW   SS++  HCSF+G+ CDE+SRV+SLN+SF +  GSIPPE+G+L+ L+NLT+
Sbjct: 46  GSGLEDWVDDSSSLFPHCSFSGVSCDEDSRVVSLNLSFVTLFGSIPPEIGMLNKLVNLTL 105

Query: 183 SSNELSGKLPLELTALTSLKVFNVSNNTLSGEFPELFASAFQNLEVLDIYNNNF 344
           + + L+GKLP+E+  LTSLK+ N+SNN  +G+FP       + LEVLD+YNNNF
Sbjct: 106 ACDNLTGKLPMEMAKLTSLKLVNLSNNNFNGQFPGRILVGMKELEVLDMYNNNF 159



 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 37/104 (35%), Positives = 52/104 (50%), Gaps = 23/104 (22%)
 Frame = +3

Query: 102 LNISFRSFHGSIPPEVGLLSNLINLTMSSNELSGKLPLELTALTSLKVFNVSNNTLSGEF 281
           L++   +  G IPP +G L  L +L +  N+LSG LP EL+ L +LK  ++SNN L+GE 
Sbjct: 249 LDLGSCNLTGEIPPSLGRLKMLHSLFLQLNQLSGHLPQELSGLVNLKSLDLSNNVLTGEI 308

Query: 282 PELFASA-----------------------FQNLEVLDIYNNNF 344
           PE F+                           NLEVL ++ NNF
Sbjct: 309 PESFSQLRELTLINLFGNQLRGRIPEFIGDLPNLEVLQVWENNF 352


>ref|XP_002307734.1| predicted protein [Populus trichocarpa]
           gi|224144099|ref|XP_002336108.1| predicted protein
           [Populus trichocarpa] gi|222857183|gb|EEE94730.1|
           predicted protein [Populus trichocarpa]
           gi|222872880|gb|EEF10011.1| predicted protein [Populus
           trichocarpa]
          Length = 973

 Score =  136 bits (342), Expect = 2e-30
 Identities = 62/114 (54%), Positives = 84/114 (73%), Gaps = 1/114 (0%)
 Frame = +3

Query: 6   GSELEDWTFS-SSAISHCSFTGILCDENSRVISLNISFRSFHGSIPPEVGLLSNLINLTM 182
           G+ L+DW  S +S  +HC F+G+ CDE+SRV+SLN+SFR   GSIPPE+GLL+ L+NLT+
Sbjct: 39  GTGLQDWVASPASPTAHCYFSGVTCDEDSRVVSLNVSFRHLPGSIPPEIGLLNKLVNLTL 98

Query: 183 SSNELSGKLPLELTALTSLKVFNVSNNTLSGEFPELFASAFQNLEVLDIYNNNF 344
           S N L+G  P+E+  LTSL++ N+SNN ++G FP         LEVLD+YNNNF
Sbjct: 99  SGNNLTGGFPVEIAMLTSLRILNISNNVIAGNFPGKITLGMALLEVLDVYNNNF 152



 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 37/99 (37%), Positives = 52/99 (52%), Gaps = 24/99 (24%)
 Frame = +3

Query: 114 FRSFHGSIPPEVGLLSNLINLTMSS------------------------NELSGKLPLEL 221
           F  + GSIPPE G LSNL  L M+S                        N L+G +P EL
Sbjct: 222 FNRYEGSIPPEFGSLSNLELLDMASCNLDGEIPSALSQLTHLHSLFLQVNNLTGHIPPEL 281

Query: 222 TALTSLKVFNVSNNTLSGEFPELFASAFQNLEVLDIYNN 338
           + L SLK  ++S N L+GE PE F S  +N+E+++++ N
Sbjct: 282 SGLISLKSLDLSINNLTGEIPESF-SDLKNIELINLFQN 319


>gb|AAB58929.1| CLV1 receptor kinase [Arabidopsis thaliana]
          Length = 980

 Score =  133 bits (335), Expect = 1e-29
 Identities = 63/114 (55%), Positives = 86/114 (75%), Gaps = 1/114 (0%)
 Frame = +3

Query: 6   GSELEDWTFSSSAISHCSFTGILCDENSRVISLNISFRSFHGSIPPEVGLLSNLINLTMS 185
           G  L DW  SSS  +HCSF+G+ CD+++RVISLN+SF    G+I PE+G+L++L+NLT++
Sbjct: 43  GHGLHDWIHSSSPDAHCSFSGVSCDDDARVISLNVSFTPLFGTISPEIGMLTHLVNLTLA 102

Query: 186 SNELSGKLPLELTALTSLKVFNVSNN-TLSGEFPELFASAFQNLEVLDIYNNNF 344
           +N  +G+LPLE+ +LTSLKV N+SNN  L+G FP     A  +LEVLD YNNNF
Sbjct: 103 ANNFTGELPLEMKSLTSLKVLNISNNGNLTGTFPGEILKAMVDLEVLDTYNNNF 156



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 32/103 (31%), Positives = 55/103 (53%), Gaps = 3/103 (2%)
 Frame = +3

Query: 45  ISHCSFTGILCDENSRVISLNISF---RSFHGSIPPEVGLLSNLINLTMSSNELSGKLPL 215
           ++ C+ TG +    S +  L+  F    +  G IPPE+  L +L +L +S N+L+G++P 
Sbjct: 248 MASCTLTGEIPTSLSNLKHLHTLFLHINNLTGHIPPELSGLVSLKSLDLSINQLTGEIPQ 307

Query: 216 ELTALTSLKVFNVSNNTLSGEFPELFASAFQNLEVLDIYNNNF 344
               L ++ + N+  N L G+ PE        LEV +++ NNF
Sbjct: 308 SFINLGNITLINLFRNNLYGQIPEAIGE-LPKLEVFEVWENNF 349


>gb|AAD02501.1| receptor kinase [Arabidopsis thaliana]
          Length = 980

 Score =  133 bits (335), Expect = 1e-29
 Identities = 63/114 (55%), Positives = 86/114 (75%), Gaps = 1/114 (0%)
 Frame = +3

Query: 6   GSELEDWTFSSSAISHCSFTGILCDENSRVISLNISFRSFHGSIPPEVGLLSNLINLTMS 185
           G  L DW  SSS  +HCSF+G+ CD+++RVISLN+SF    G+I PE+G+L++L+NLT++
Sbjct: 43  GHGLHDWIHSSSPDAHCSFSGVSCDDDARVISLNVSFTPLFGTISPEIGMLTHLVNLTLA 102

Query: 186 SNELSGKLPLELTALTSLKVFNVSNN-TLSGEFPELFASAFQNLEVLDIYNNNF 344
           +N  +G+LPLE+ +LTSLKV N+SNN  L+G FP     A  +LEVLD YNNNF
Sbjct: 103 ANNFTGELPLEMKSLTSLKVLNISNNGNLTGTFPGEILKAMVDLEVLDTYNNNF 156



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 32/103 (31%), Positives = 55/103 (53%), Gaps = 3/103 (2%)
 Frame = +3

Query: 45  ISHCSFTGILCDENSRVISLNISF---RSFHGSIPPEVGLLSNLINLTMSSNELSGKLPL 215
           ++ C+ TG +    S +  L+  F    +  G IPPE+  L +L +L +S N+L+G++P 
Sbjct: 248 MASCTLTGEIPTSLSNLKHLHTLFLHINNLTGHIPPELSGLVSLKSLDLSINQLTGEIPQ 307

Query: 216 ELTALTSLKVFNVSNNTLSGEFPELFASAFQNLEVLDIYNNNF 344
               L ++ + N+  N L G+ PE        LEV +++ NNF
Sbjct: 308 SFINLGNITLINLFRNNLYGQIPEAIGE-LPKLEVFEVWENNF 349


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